RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 GPM6AP51674 278 aa16.18■□□□□ 0.18
HOXA9-202ENST00000396345 GABARAPL2P60520 117 aa16.18■□□□□ 0.18
HOXA9-202ENST00000396345 LOXL1Q08397 574 aaPredicted RBP16.18■□□□□ 0.18
HOXA9-202ENST00000396345 ZNF181Q2M3W8 571 aa16.18■□□□□ 0.18
HOXA9-202ENST00000396345 DMKNQ6E0U4 476 aaPredicted RBP16.18■□□□□ 0.18
HOXA9-202ENST00000396345 ADAT3Q96EY9 351 aaPredicted RBP16.18■□□□□ 0.18
HOXA9-202ENST00000396345 C18orf12Q96KH6 178 aa16.18■□□□□ 0.18
HOXA9-202ENST00000396345 COX4I2Q96KJ9 171 aa16.18■□□□□ 0.18
HOXA9-202ENST00000396345 C1orf123Q9NWV4 160 aa16.18■□□□□ 0.18
HOXA9-202ENST00000396345 ZNF281Q9Y2X9 895 aa16.18■□□□□ 0.18
HOXA9-202ENST00000396345 LSM2Q9Y333 95 aaKnown RBP16.18■□□□□ 0.18
HOXA9-202ENST00000396345 WIPI2Q9Y4P8 454 aa16.18■□□□□ 0.18
HOXA9-202ENST00000396345 NPTNQ9Y639 398 aa16.18■□□□□ 0.18
HOXA9-202ENST00000396345 F8P00451 2351 aa16.18■□□□□ 0.18
HOXA9-202ENST00000396345 ZNF469Q96JG9 3925 aaPredicted RBP16.17■□□□□ 0.18
HOXA9-202ENST00000396345 OR5B21A6NL26 309 aa16.17■□□□□ 0.18
HOXA9-202ENST00000396345 ZNF732B4DXR9 585 aa16.17■□□□□ 0.18
HOXA9-202ENST00000396345 GATBO75879 557 aaKnown RBP16.17■□□□□ 0.18
HOXA9-202ENST00000396345 FOSL1P15407 271 aa16.17■□□□□ 0.18
HOXA9-202ENST00000396345 GNG3P63215 75 aa16.17■□□□□ 0.18
HOXA9-202ENST00000396345 BDH1Q02338 343 aa16.17■□□□□ 0.18
HOXA9-202ENST00000396345 ZNF154Q13106 437 aa16.17■□□□□ 0.18
HOXA9-202ENST00000396345 DOC2BQ14184 412 aa16.17■□□□□ 0.18
HOXA9-202ENST00000396345 SPHARQ15513 63 aa16.17■□□□□ 0.18
HOXA9-202ENST00000396345 MED22Q15528 200 aa16.17■□□□□ 0.18
HOXA9-202ENST00000396345 ZNF826PQ6ZT77 177 aa16.17■□□□□ 0.18
HOXA9-202ENST00000396345 C1orf87Q8N0U7 546 aa16.17■□□□□ 0.18
HOXA9-202ENST00000396345 TSEN15Q8WW01 171 aaKnown RBP16.17■□□□□ 0.18
HOXA9-202ENST00000396345 PP6455Q8WZ26 134 aa16.17■□□□□ 0.18
HOXA9-202ENST00000396345 RGP1Q92546 391 aaPredicted RBP16.17■□□□□ 0.18
HOXA9-202ENST00000396345 GHSRQ92847 366 aa16.17■□□□□ 0.18
HOXA9-202ENST00000396345 OR5M11Q96RB7 305 aa16.17■□□□□ 0.18
HOXA9-202ENST00000396345 CHST5Q9GZS9 411 aa16.17■□□□□ 0.18
HOXA9-202ENST00000396345 RNF7Q9UBF6 113 aa16.17■□□□□ 0.18
HOXA9-202ENST00000396345 DHDHQ9UQ10 334 aa16.17■□□□□ 0.18
HOXA9-202ENST00000396345 LRRC42Q9Y546 428 aa16.17■□□□□ 0.18
HOXA9-202ENST00000396345 CR1P17927 2039 aa16.16■□□□□ 0.18
HOXA9-202ENST00000396345 PNMA8CA0A1B0GUJ8 204 aa16.16■□□□□ 0.18
HOXA9-202ENST00000396345 hCG_1807616A0A1W2PRN6 198 aa16.16■□□□□ 0.18
HOXA9-202ENST00000396345 CELP19835 753 aa16.16■□□□□ 0.18
HOXA9-202ENST00000396345 CHN2P52757 468 aa16.16■□□□□ 0.18
HOXA9-202ENST00000396345 ACSM1Q08AH1 577 aa16.16■□□□□ 0.18
HOXA9-202ENST00000396345 UBE2V2Q15819 145 aa16.16■□□□□ 0.18
HOXA9-202ENST00000396345 FAM76BQ5HYJ3 339 aa16.16■□□□□ 0.18
HOXA9-202ENST00000396345 C11orf53Q8IXP5 236 aa16.16■□□□□ 0.18
HOXA9-202ENST00000396345 GPR148Q8TDV2 347 aa16.16■□□□□ 0.18
HOXA9-202ENST00000396345 RPL3LQ92901 407 aaKnown RBP16.16■□□□□ 0.18
HOXA9-202ENST00000396345 TLNRD1Q9H1K6 362 aa16.16■□□□□ 0.18
HOXA9-202ENST00000396345 NARFLQ9H6Q4 476 aa16.16■□□□□ 0.18
HOXA9-202ENST00000396345 SLC7A11Q9UPY5 501 aa16.16■□□□□ 0.18
HOXA9-202ENST00000396345 ISPDA4D126 451 aa16.15■□□□□ 0.18
HOXA9-202ENST00000396345 LRP5LA4QPB2 252 aa16.15■□□□□ 0.18
HOXA9-202ENST00000396345 CDIPTO14735 213 aa16.15■□□□□ 0.18
HOXA9-202ENST00000396345 WNT9BO14905 357 aa16.15■□□□□ 0.18
HOXA9-202ENST00000396345 PLPP2O43688 288 aa16.15■□□□□ 0.18
HOXA9-202ENST00000396345 MRPS14O60783 128 aaKnown RBP16.15■□□□□ 0.18
HOXA9-202ENST00000396345 IGHV2-70P01814 119 aa16.15■□□□□ 0.18
HOXA9-202ENST00000396345 INHBBP09529 407 aa16.15■□□□□ 0.18
HOXA9-202ENST00000396345 MAP2K4P45985 399 aa16.15■□□□□ 0.18
HOXA9-202ENST00000396345 BTG1P62324 171 aa16.15■□□□□ 0.18
HOXA9-202ENST00000396345 UTS2BQ765I0 119 aa16.15■□□□□ 0.18
HOXA9-202ENST00000396345 SCCPDHQ8NBX0 429 aa16.15■□□□□ 0.18
HOXA9-202ENST00000396345 PGLYRP3Q96LB9 341 aa16.15■□□□□ 0.18
HOXA9-202ENST00000396345 TECTBQ96PL2 329 aa16.15■□□□□ 0.18
HOXA9-202ENST00000396345 OR51I2Q9H344 312 aa16.15■□□□□ 0.18
HOXA9-202ENST00000396345 TEP1Q99973 2627 aaKnown RBP16.15■□□□□ 0.18
HOXA9-202ENST00000396345 MED13LQ71F56 2210 aa16.14■□□□□ 0.17
HOXA9-202ENST00000396345 PQLC2LA1A4F0 135 aa16.14■□□□□ 0.17
HOXA9-202ENST00000396345 ZNF205O95201 554 aa16.14■□□□□ 0.17
HOXA9-202ENST00000396345 CD1AP06126 327 aa16.14■□□□□ 0.17
HOXA9-202ENST00000396345 OCM2P0CE71 109 aa16.14■□□□□ 0.17
HOXA9-202ENST00000396345 SOX2P48431 317 aa16.14■□□□□ 0.17
HOXA9-202ENST00000396345 ZMYND11Q15326 602 aa16.14■□□□□ 0.17
HOXA9-202ENST00000396345 CNN3Q15417 329 aaKnown RBP16.14■□□□□ 0.17
HOXA9-202ENST00000396345 YIF1BQ5BJH7 314 aa16.14■□□□□ 0.17
HOXA9-202ENST00000396345 WDR82Q6UXN9 313 aa16.14■□□□□ 0.17
HOXA9-202ENST00000396345 BOLLQ8N9W6 283 aaKnown RBP16.14■□□□□ 0.17
HOXA9-202ENST00000396345 TRMT10AQ8TBZ6 339 aaKnown RBP16.14■□□□□ 0.17
HOXA9-202ENST00000396345 NPRL2Q8WTW4 380 aa16.14■□□□□ 0.17
HOXA9-202ENST00000396345 METTL17Q9H7H0 456 aaPredicted RBP16.14■□□□□ 0.17
HOXA9-202ENST00000396345 ZANQ9Y493 2812 aa16.14■□□□□ 0.17
HOXA9-202ENST00000396345 PPIAL4EA0A075B759 164 aa16.13■□□□□ 0.17
HOXA9-202ENST00000396345 FAM230AA0A1W2PPH8 454 aa16.13■□□□□ 0.17
HOXA9-202ENST00000396345 PPIAL4DF5H284 164 aa16.13■□□□□ 0.17
HOXA9-202ENST00000396345 CD2P06729 351 aa16.13■□□□□ 0.17
HOXA9-202ENST00000396345 HSMCR30P0CW71 290 aa16.13■□□□□ 0.17
HOXA9-202ENST00000396345 PPIAL4FP0DN26 164 aa16.13■□□□□ 0.17
HOXA9-202ENST00000396345 ATF1P18846 271 aa16.13■□□□□ 0.17
HOXA9-202ENST00000396345 MDH2P40926 338 aaKnown RBP16.13■□□□□ 0.17
HOXA9-202ENST00000396345 FUT6P51993 359 aa16.13■□□□□ 0.17
HOXA9-202ENST00000396345 TBCEQ15813 527 aaPredicted RBP16.13■□□□□ 0.17
HOXA9-202ENST00000396345 FAM201AQ5SY85 155 aa16.13■□□□□ 0.17
HOXA9-202ENST00000396345 LRRC28Q86X40 367 aaPredicted RBP16.13■□□□□ 0.17
HOXA9-202ENST00000396345 ZNF573Q86YE8 665 aa16.13■□□□□ 0.17
HOXA9-202ENST00000396345 SERPINA12Q8IW75 414 aa16.13■□□□□ 0.17
HOXA9-202ENST00000396345 PARP16Q8N5Y8 322 aa16.13■□□□□ 0.17
HOXA9-202ENST00000396345 OR5D14Q8NGL3 314 aa16.13■□□□□ 0.17
HOXA9-202ENST00000396345 OR13C5Q8NGS8 318 aa16.13■□□□□ 0.17
HOXA9-202ENST00000396345 CLDND2Q8NHS1 167 aa16.13■□□□□ 0.17
HOXA9-202ENST00000396345 LRRC29Q8WV35 223 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms