RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	SLC17A1	Q14916	467 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	MZT2A	Q6P582	158 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	LINGO2	Q7L985	606 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	LRRTM1	Q86UE6	522 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	OR2G2	Q8NGZ5	317 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	FNDC9	Q8TBE3	224 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	OR8B4	Q96RC9	309 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	TLNRD1	Q9H1K6	362 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	FBXL3	Q9UKT7	428 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	LRP12	Q9Y561	859 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	TRGV5	A0A0B4J1U4	118 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499		A0A1B0GVI7	797 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	MRPL33	O75394	65 aa	Known RBP	10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	MAS1	P04201	325 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	CD3G	P09693	182 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	FGF9	P31371	208 aa	Predicted RBP	10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	ZNF283	Q8N7M2	679 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	SLAMF6	Q96DU3	332 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	COL27A1	Q8IZC6	1860 aa	Predicted RBP	10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	hCG_1809904	A0A1W2PP81	198 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499		A0A1W2PR64	198 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499		A0A1W2PRV1	198 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499		F5H5K5	113 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	EREG	O14944	169 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	OR8U8	P0C7N1	319 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	NDUFA6	P56556	154 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	MICB	Q29980	383 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	CD276	Q5ZPR3	534 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	HAS2	Q92819	552 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	FRRS1L	Q9P0K9	344 aa		10.3	□□□□□ -0.76
LMO7-204	ENST00000377499	ASPM	Q8IZT6	3477 aa		10.29	□□□□□ -0.76
LMO7-204	ENST00000377499	C9orf170	A2RU37	121 aa		10.29	□□□□□ -0.76
LMO7-204	ENST00000377499	TUBAL3	A6NHL2	446 aa		10.29	□□□□□ -0.76
LMO7-204	ENST00000377499	GPRIN2	O60269	458 aa		10.29	□□□□□ -0.76
LMO7-204	ENST00000377499	TCRB	P04435	133 aa		10.29	□□□□□ -0.76
LMO7-204	ENST00000377499	H2AFB1	P0C5Y9	115 aa		10.29	□□□□□ -0.76
LMO7-204	ENST00000377499	H2AFB2	P0C5Z0	115 aa		10.29	□□□□□ -0.76
LMO7-204	ENST00000377499	DLX5	P56178	289 aa		10.29	□□□□□ -0.76
LMO7-204	ENST00000377499	BAIAP2L2	Q6UXY1	529 aa		10.29	□□□□□ -0.76
LMO7-204	ENST00000377499	TMUB2	Q71RG4	321 aa		10.29	□□□□□ -0.76
LMO7-204	ENST00000377499	ZADH2	Q8N4Q0	377 aa		10.29	□□□□□ -0.76
LMO7-204	ENST00000377499	ADPRHL1	Q8NDY3	354 aa		10.29	□□□□□ -0.76
LMO7-204	ENST00000377499	ZNF69	Q9UC07	566 aa		10.29	□□□□□ -0.76
LMO7-204	ENST00000377499	SPTBN4	Q9H254	2564 aa		10.29	□□□□□ -0.76
LMO7-204	ENST00000377499	RER1	O15258	196 aa		10.29	□□□□□ -0.76
LMO7-204	ENST00000377499	OGG1	O15527	345 aa		10.29	□□□□□ -0.76
LMO7-204	ENST00000377499	UCHL1	P09936	223 aa		10.29	□□□□□ -0.76
LMO7-204	ENST00000377499	TNFSF10	P50591	281 aa		10.29	□□□□□ -0.76
LMO7-204	ENST00000377499	GGN	Q86UU5	652 aa		10.29	□□□□□ -0.76
LMO7-204	ENST00000377499	GPR148	Q8TDV2	347 aa		10.29	□□□□□ -0.76
LMO7-204	ENST00000377499	TMEM106A	Q96A25	262 aa		10.29	□□□□□ -0.76
LMO7-204	ENST00000377499	PGLYRP3	Q96LB9	341 aa		10.29	□□□□□ -0.76
LMO7-204	ENST00000377499	PLEK2	Q9NYT0	353 aa		10.29	□□□□□ -0.76
LMO7-204	ENST00000377499	UPB1	Q9UBR1	384 aa		10.29	□□□□□ -0.76
LMO7-204	ENST00000377499	GDF2	Q9UK05	429 aa	Predicted RBP	10.29	□□□□□ -0.76
LMO7-204	ENST00000377499	MEIKIN	A0A087WXM9	373 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	NUDT19	A8MXV4	375 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	DHH	O43323	396 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	FZD7	O75084	574 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	WNT11	O96014	354 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	MT-ND4	P03905	459 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	CPT2	P23786	658 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	AP3S2	P59780	193 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	NHLH2	Q02577	135 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	BATF	Q16520	125 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	WDR38	Q5JTN6	314 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	LRP11	Q86VZ4	500 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	ZNF100	Q8IYN0	542 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	SAMD12	Q8N8I0	201 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	OR10AC1	Q8NH08	325 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	OR2M2	Q96R28	347 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	THAP7	Q9BT49	309 aa	Predicted RBP	10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	C12orf49	Q9H741	205 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	DHDH	Q9UQ10	334 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	SLC5A6	Q9Y289	635 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	LIPG	Q9Y5X9	500 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	TRAV17	A0A0B4J275	112 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	SHISA3	A0PJX4	238 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499		A6NLC8	198 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	MBP	P02686	304 aa	Predicted RBP	10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	LIN54	Q6MZP7	749 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	NHLRC1	Q6VVB1	395 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	PRSS35	Q8N3Z0	413 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	STOML3	Q8TAV4	291 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	CLCC1	Q96S66	551 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	C2orf88	Q9BSF0	95 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	OR10A4	Q9H209	315 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	PTTG3P	Q9NZH4	202 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	SPTA1	P02549	2419 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	TMEM218	A2RU14	115 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	OR2AT4	A6NND4	320 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	UPK3A	O75631	287 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	DAO	P14920	347 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	PSMA6	P60900	246 aa	Known RBP	10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	H3F3A	P84243	136 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	RTP5	Q14D33	572 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	LPCAT3	Q6P1A2	487 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	MDS2	Q8NDY4	140 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	OR5M9	Q8NGP3	310 aa		10.28	□□□□□ -0.76
LMO7-204	ENST00000377499	MRPL13	Q9BYD1	178 aa	Known RBP	10.28	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms