RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 ZBP1Q9H171 429 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 ADGRL4Q9HBW9 690 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 SMLR1H3BR10 107 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 CCSO14618 274 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 CD1EP15812 388 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 HIST1H3AP68431 136 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 NAAAQ02083 359 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 DND1Q8IYX4 353 aaKnown RBP10.91□□□□□ -0.66
PCF11-201ENST00000298281 FAM210BQ96KR6 192 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 RSG1Q9BU20 258 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 TUBA4BQ9H853 241 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 PPIL1Q9Y3C6 166 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 KMT2EQ8IZD2 1858 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 F5P12259 2224 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 A0A087WV62 115 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 NPPBP16860 134 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 BCL3P20749 454 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 PDZK1IP1Q13113 114 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 C6orf201Q7Z4U5 140 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 OR10C1Q96KK4 312 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 ZNF2Q9BSG1 426 aaPredicted RBP10.91□□□□□ -0.66
PCF11-201ENST00000298281 ADAT1Q9BUB4 502 aaKnown RBP10.91□□□□□ -0.66
PCF11-201ENST00000298281 ZNF576Q9H609 170 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 FAM221AA4D161 298 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 FBLL1A6NHQ2 334 aaKnown RBP10.91□□□□□ -0.66
PCF11-201ENST00000298281 K7ESF4 209 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 GNG4P50150 75 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 HERPUD1Q15011 391 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 FFAR4Q5NUL3 377 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 DHRS4L2Q6PKH6 230 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 BVESQ8NE79 360 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 RXFP4Q8TDU9 374 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 OIT3Q8WWZ8 545 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 CGGBP1Q9UFW8 167 aaPredicted RBP10.91□□□□□ -0.66
PCF11-201ENST00000298281 H0YIG0 161 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 CD22P20273 847 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 ALOX5APP20292 161 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 LIM2P55344 173 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 Q6ZSR9 355 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 ZNF683Q8IZ20 524 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 ARRDC1-AS1Q9H2J1 176 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 CES1P1Q9UKY3 287 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 SP1P08047 785 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 ABI3BPQ7Z7G0 1075 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 SLC26A10Q8NG04 563 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 SLCO4A1Q96BD0 722 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 SOD1P00441 154 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 OR3A4PP47883 348 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 CDX1P47902 265 aaPredicted RBP10.9□□□□□ -0.66
PCF11-201ENST00000298281 CTU2Q2VPK5 515 aaKnown RBP10.9□□□□□ -0.66
PCF11-201ENST00000298281 ETV3LQ6ZN32 361 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 ZNF511Q8NB15 262 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 OR10A7Q8NGE5 316 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 SLC37A2Q8TED4 501 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 SCARB1Q8WTV0 552 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 ZDHHC5Q9C0B5 715 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 C19orf53Q9UNZ5 99 aaPredicted RBP10.9□□□□□ -0.66
PCF11-201ENST00000298281 LOC389332A0A1B0GUA5 103 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 DHRS7CA6NNS2 312 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 QDPRP09417 244 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 SPI1P17947 270 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 OR2F1Q13607 317 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 LAIR1Q6GTX8 287 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 OR10V1Q8NGI7 309 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 ZCCHC14Q8WYQ9 949 aaKnown RBP10.9□□□□□ -0.66
PCF11-201ENST00000298281 NAT8BQ9UHF3 227 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 CDK2AP2O75956 126 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 CAMPP49913 170 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 PFN3P60673 137 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 MORN4Q8NDC4 146 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 OR5H6Q8NGV6 325 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 ASB13Q8WXK3 278 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 KCNK15Q9H427 330 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 FKBP11Q9NYL4 201 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 MMP17Q9ULZ9 603 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 SLC22A20A6NK97 555 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 SEMA7AO75326 666 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 HAAOP46952 286 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 ASTLQ6HA08 431 aaPredicted RBP10.9□□□□□ -0.66
PCF11-201ENST00000298281 Q96M85 177 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 OR5V1Q9UGF6 321 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 PF4V1P10720 104 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 NME1P15531 152 aaKnown RBP10.9□□□□□ -0.66
PCF11-201ENST00000298281 OPRM1P35372 400 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 ID1P41134 155 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 TRMT12Q53H54 448 aaKnown RBP10.9□□□□□ -0.66
PCF11-201ENST00000298281 ACSM5Q6NUN0 579 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 SLC16A11Q8NCK7 471 aa10.9□□□□□ -0.66
PCF11-201ENST00000298281 NKX6-2Q9C056 277 aaPredicted RBP10.9□□□□□ -0.66
PCF11-201ENST00000298281 GSTZ1O43708 216 aaPredicted RBP10.9□□□□□ -0.67
PCF11-201ENST00000298281 TSPAN13O95857 204 aa10.9□□□□□ -0.67
PCF11-201ENST00000298281 RECKO95980 971 aa10.9□□□□□ -0.67
PCF11-201ENST00000298281 CSN3P07498 182 aa10.9□□□□□ -0.67
PCF11-201ENST00000298281 OR4A8P0C604 315 aa10.9□□□□□ -0.67
PCF11-201ENST00000298281 JUNBP17275 347 aaPredicted RBP10.9□□□□□ -0.67
PCF11-201ENST00000298281 DPTQ07507 201 aa10.9□□□□□ -0.67
PCF11-201ENST00000298281 AFMIDQ63HM1 303 aa10.9□□□□□ -0.67
PCF11-201ENST00000298281 OPALINQ96PE5 141 aa10.9□□□□□ -0.67
PCF11-201ENST00000298281 ATG101Q9BSB4 218 aa10.9□□□□□ -0.67
PCF11-201ENST00000298281 CTSLP07711 333 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms