RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 TCFL5Q9UL49 500 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 PATE3B3GLJ2 98 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 SEC14L6B5MCN3 397 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 FUT3P21217 361 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 COX7A1P24310 79 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 GPNMBQ14956 572 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 BTNL8Q6UX41 500 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 CALHM3Q86XJ0 350 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 M1APQ8TC57 530 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 TMED6Q8WW62 240 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 CMBLQ96DG6 245 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 MISP3Q96FF7 219 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 HES4Q9HCC6 221 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 KLK11Q9UBX7 282 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 SPAARA0A1B0GVQ0 90 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 DCTN6O00399 190 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 LALBAP00709 142 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 PATE4P0C8F1 98 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 PNLIPRP3Q17RR3 467 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 PRR27Q6MZM9 219 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 HIST2H3AQ71DI3 136 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 FAM58AQ8N1B3 248 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 C2orf50Q96LR7 162 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 DUSP21Q9H596 190 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 SERPINE3A8MV23 424 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 EPPINO95925 133 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 PMP22Q01453 160 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 WDR38Q5JTN6 314 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 OR4C16Q8NGL9 310 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 RPUSD4Q96CM3 377 aaKnown RBP15.44■□□□□ 0.06
SHANK1-201ENST00000293441 ZNF230Q9UIE0 474 aaPredicted RBP15.44■□□□□ 0.06
SHANK1-201ENST00000293441 ADAMTSL1Q8N6G6 1762 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 TRAV1-2A0A0B4J238 106 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 C3orf80F5H4A9 247 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 ZNF354AO60765 605 aaPredicted RBP15.44■□□□□ 0.06
SHANK1-201ENST00000293441 RHBDD2Q6NTF9 364 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 TMPRSS11FQ6ZWK6 438 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 LYG1Q8N1E2 194 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 SPSB1Q96BD6 273 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 UBTD1Q9HAC8 227 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 RGPD4Q7Z3J3 1758 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 ASPDHA6ND91 283 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 H3BP45 60 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 AVPI1Q5T686 147 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 ZNF787Q6DD87 383 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 LHX4Q969G2 390 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 UBE2L5PA0A1B0GUS4 154 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 FXYD1O00168 92 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 APOBEC4Q8WW27 367 aaKnown RBP15.44■□□□□ 0.06
SHANK1-201ENST00000293441 EID2BQ96D98 161 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 YIPF6Q96EC8 236 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 TREM2Q9NZC2 230 aa15.44■□□□□ 0.06
SHANK1-201ENST00000293441 GABRB1P18505 474 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 SLC25A1P53007 311 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 KIAA1217Q5T5P2 1943 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 WNT3P56703 355 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 ZNF90Q03938 601 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 KISS1Q15726 138 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 BHLHA15Q7RTS1 189 aaPredicted RBP15.43■□□□□ 0.06
SHANK1-201ENST00000293441 UBE3DQ7Z6J8 389 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 ABI3BPQ7Z7G0 1075 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 LRRC29Q8WV35 223 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 RAB1BQ9H0U4 201 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 SLC35D1Q9NTN3 355 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 LTBP4Q8N2S1 1624 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 RPUSD3Q6P087 351 aaKnown RBP15.43■□□□□ 0.06
SHANK1-201ENST00000293441 GPR32P1Q8NGA4 272 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 KRASP01116 189 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 PXDC1Q5TGL8 231 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 DHRS9Q9BPW9 319 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 LRFN3Q9BTN0 628 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 TMPRSS13Q9BYE2 586 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 TMEM231Q9H6L2 316 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 CLCF1Q9UBD9 225 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 ATG2BQ96BY7 2078 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 PLPP3O14495 311 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 OR2C1O95371 312 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 MBP02144 154 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 COX5AP20674 150 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 ZNRF4Q8WWF5 429 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 C14orf79Q96F83 325 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 TEX51A0A1B0GUA7 166 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 SLC17A2O00624 439 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 CDX4O14627 284 aaPredicted RBP15.43■□□□□ 0.06
SHANK1-201ENST00000293441 ASCL1P50553 236 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 ZNF705AQ6ZN79 300 aaPredicted RBP15.43■□□□□ 0.06
SHANK1-201ENST00000293441 VN1R4Q7Z5H5 301 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 CARFQ8N187 725 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 ZG16BQ96DA0 208 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 GPR87Q9BY21 358 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 IL20Q9NYY1 176 aa15.43■□□□□ 0.06
SHANK1-201ENST00000293441 OR6C68A6NDL8 312 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 SLC25A4P12235 298 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 MAGEA5P43359 124 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 C12orf73Q69YU5 71 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 WDR74Q6RFH5 385 aaPredicted RBP15.42■□□□□ 0.06
SHANK1-201ENST00000293441 TMEM229BQ8NBD8 167 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 RFESDQ8TAC1 157 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 DYNC2LI1Q8TCX1 351 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 DHRS3O75911 302 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms