RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 SLC22A18Q96BI1 424 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 GPHA2Q96T91 129 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 CHST5Q9GZS9 411 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 SLC26A1Q9H2B4 701 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 TUBA4BQ9H853 241 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 MED29Q9NX70 200 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 VSX1Q9NZR4 365 aaPredicted RBP12.2□□□□□ -0.46
SCARB2-227ENST00000640957 OR52A1Q9UKL2 312 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 A0A0A6YYD4 124 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 IGKV1D-43A0A0B4J1Z2 117 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 FAM221AA4D161 298 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 C2orf74A8MZ97 194 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 GEMIN2O14893 280 aaKnown RBP12.2□□□□□ -0.46
SCARB2-227ENST00000640957 CNOT4O95628 575 aaKnown RBP12.2□□□□□ -0.46
SCARB2-227ENST00000640957 APLNRP35414 380 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 SNCAP37840 140 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 CSNK1EP49674 416 aaKnown RBP12.2□□□□□ -0.46
SCARB2-227ENST00000640957 FXYD4P59646 89 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 ERVFRD-1P60508 538 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 OR2T2Q6IF00 324 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 DPPA2Q7Z7J5 298 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 NTNG2Q96CW9 530 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 SNX22Q96L94 193 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 GNRHR2Q96P88 292 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 NMES1Q9C002 83 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 OR8D2Q9GZM6 311 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 HIF3AQ9Y2N7 669 aa12.2□□□□□ -0.46
SCARB2-227ENST00000640957 TERTO14746 1132 aaKnown RBP12.19□□□□□ -0.46
SCARB2-227ENST00000640957 SFT2D2O95562 160 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 HOXA5P20719 270 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 CX3CR1P49238 355 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 NAAAQ02083 359 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 ZNF385CQ66K41 422 aaPredicted RBP12.19□□□□□ -0.46
SCARB2-227ENST00000640957 STX12Q86Y82 276 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 CA13Q8N1Q1 262 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 OR5H2Q8NGV7 314 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 OR13G1Q8NGZ3 307 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 RSC1A1Q92681 617 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 RTBDNQ9BSG5 229 aaPredicted RBP12.19□□□□□ -0.46
SCARB2-227ENST00000640957 WFDC1Q9HC57 220 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 SDHAF3Q9NRP4 125 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 PNO1Q9NRX1 252 aaKnown RBP12.19□□□□□ -0.46
SCARB2-227ENST00000640957 CYP8B1Q9UNU6 501 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 TMEM14AQ9Y6G1 99 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 NBEAQ8NFP9 2946 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 ESPL1Q14674 2120 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 CXorf51AA0A1B0GTR3 108 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 EPOPA6NHQ4 379 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 DBX1A6NMT0 343 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 MMP7P09237 267 aaPredicted RBP12.19□□□□□ -0.46
SCARB2-227ENST00000640957 CYCSP99999 105 aaKnown RBP12.19□□□□□ -0.46
SCARB2-227ENST00000640957 HOGA1Q86XE5 327 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 SUMF2Q8NBJ7 301 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 PMM1Q92871 262 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 SAT2Q96F10 170 aaPredicted RBP12.19□□□□□ -0.46
SCARB2-227ENST00000640957 KIAA2026Q5HYC2 2103 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 TCRBV21S2A2A0A5A6 115 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 HIST1H2BKO60814 126 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 HIST1H2BJP06899 126 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 HIST1H2BOP23527 126 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 HIST1H2BBP33778 126 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 CDX1P47902 265 aaPredicted RBP12.19□□□□□ -0.46
SCARB2-227ENST00000640957 RBP2P50120 134 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 HIST1H2BDP58876 126 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 STARD6P59095 220 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 HIST1H2BCP62807 126 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 EGR3Q06889 387 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 SRSF4Q08170 494 aaKnown RBP12.19□□□□□ -0.46
SCARB2-227ENST00000640957 HIST2H2BEQ16778 126 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.19□□□□□ -0.46
SCARB2-227ENST00000640957 EIF5AL1Q6IS14 154 aaKnown RBP12.19□□□□□ -0.46
SCARB2-227ENST00000640957 LRRC75AQ8NAA5 344 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 OR51E1Q8TCB6 317 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 HIST1H2BHQ93079 126 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 MMABQ96EY8 250 aaPredicted RBP12.19□□□□□ -0.46
SCARB2-227ENST00000640957 C2orf50Q96LR7 162 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 CDC6Q99741 560 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 HIST1H2BNQ99877 126 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 HIST1H2BMQ99879 126 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 CFHR5Q9BXR6 569 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 KIR3DX1Q9H7L2 352 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 FBRSQ9HAH7 460 aa12.19□□□□□ -0.46
SCARB2-227ENST00000640957 SDK2Q58EX2 2172 aa12.18□□□□□ -0.46
SCARB2-227ENST00000640957 TCAPO15273 167 aa12.18□□□□□ -0.46
SCARB2-227ENST00000640957 F10P00742 488 aa12.18□□□□□ -0.46
SCARB2-227ENST00000640957 SSTP61278 116 aa12.18□□□□□ -0.46
SCARB2-227ENST00000640957 TMEM156Q8N614 296 aa12.18□□□□□ -0.46
SCARB2-227ENST00000640957 ZDHHC22Q8N966 263 aa12.18□□□□□ -0.46
SCARB2-227ENST00000640957 PADI1Q9ULC6 663 aa12.18□□□□□ -0.46
SCARB2-227ENST00000640957 IGKV1D-8A0A087WSZ0 117 aa12.18□□□□□ -0.46
SCARB2-227ENST00000640957 PPP1R2P9O14990 202 aa12.18□□□□□ -0.46
SCARB2-227ENST00000640957 SYT7O43581 403 aa12.18□□□□□ -0.46
SCARB2-227ENST00000640957 AHSA1O95433 338 aa12.18□□□□□ -0.46
SCARB2-227ENST00000640957 MELTFP08582 738 aa12.18□□□□□ -0.46
SCARB2-227ENST00000640957 HCKP08631 526 aa12.18□□□□□ -0.46
SCARB2-227ENST00000640957 MMP9P14780 707 aa12.18□□□□□ -0.46
SCARB2-227ENST00000640957 UBE2KP61086 200 aa12.18□□□□□ -0.46
SCARB2-227ENST00000640957 PDCD1Q15116 288 aa12.18□□□□□ -0.46
SCARB2-227ENST00000640957 C16orf47Q6ZP98 133 aaPredicted RBP12.18□□□□□ -0.46
SCARB2-227ENST00000640957 OR1J1Q8NGS3 322 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms