RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 ADGRG4Q8IZF6 3080 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 SPAARA0A1B0GVQ0 90 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 A0A1W2PQ72 361 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 TMEM129A0AVI4 362 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 A6NIZ1 184 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 BHLHE40O14503 412 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 CDC42EP2O14613 210 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 PHYHO14832 338 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 ARPC3O15145 178 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 RNF13O43567 381 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 RAD1O60671 282 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 TNFSF15O95150 251 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 GABARAPO95166 117 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 SNX4O95219 450 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 LYPD3O95274 346 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 SERPINA7P05543 415 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 CD14P08571 375 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 IGFBP1P08833 259 aaPredicted RBP4.03□□□□□ -1.76
VPS29-212ENST00000621131 OR2T7P0C7T2 308 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 NR2C1P13056 603 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 PSMA1P25786 263 aaKnown RBP4.03□□□□□ -1.76
VPS29-212ENST00000621131 ETV5P41161 510 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 SLC15A1P46059 708 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 RPS5P46782 204 aaKnown RBP4.03□□□□□ -1.76
VPS29-212ENST00000621131 DAP3P51398 398 aaKnown RBP4.03□□□□□ -1.76
VPS29-212ENST00000621131 BLVRAP53004 296 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 MLF1P58340 268 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 RAP1BP61224 184 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 ACTA2P62736 377 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 RAP1AP62834 184 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 ACTG2P63267 376 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 ARF1P84077 181 aaKnown RBP4.03□□□□□ -1.76
VPS29-212ENST00000621131 BDH1Q02338 343 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 MLLT11Q13015 90 aaPredicted RBP4.03□□□□□ -1.76
VPS29-212ENST00000621131 CHAF1BQ13112 559 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 SELENBP1Q13228 472 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 PON3Q15166 354 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 SPHARQ15513 63 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 TRAM1Q15629 374 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 SGCBQ16585 318 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 SLC22A10Q63ZE4 541 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 LAIR2Q6ISS4 152 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 C3orf33Q6P1S2 294 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 NIPAL3Q6P499 406 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 PLBD1Q6P4A8 553 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 TEX38Q6PEX7 206 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 DNM1P34Q6PK57 102 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 GDPGP1Q6ZNW5 385 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 FAM220AQ7Z4H9 259 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 RPS19BP1Q86WX3 136 aaKnown RBP4.03□□□□□ -1.76
VPS29-212ENST00000621131 MEX3DQ86XN8 651 aaKnown RBP4.03□□□□□ -1.76
VPS29-212ENST00000621131 ACBD7Q8N6N7 88 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 CLEC1AQ8NC01 280 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 OR11G2Q8NGC1 345 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 OR11H4Q8NGC9 324 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 OR51G2Q8NGK0 314 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 OR52I1Q8NGK6 324 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 OR1J4Q8NGS1 313 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 OR2T4Q8NH00 348 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 OR5J2Q8NH18 312 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 OR52N1Q8NH53 320 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 GPR119Q8TDV5 335 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 CCDC107Q8WV48 283 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 LIPHQ8WWY8 451 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 S100ZQ8WXG8 99 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 SLC25A36Q96CQ1 311 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 YIPF6Q96EC8 236 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 FER1L6-AS2Q96M78 137 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 TNFRSF13CQ96RJ3 184 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 GPX7Q96SL4 187 aaPredicted RBP4.03□□□□□ -1.76
VPS29-212ENST00000621131 CNN2Q99439 309 aaKnown RBP4.03□□□□□ -1.76
VPS29-212ENST00000621131 MGLLQ99685 303 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 DOK1Q99704 481 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 GPA33Q99795 319 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 DCUN1D5Q9BTE7 237 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 RSPO3Q9BXY4 272 aaPredicted RBP4.03□□□□□ -1.76
VPS29-212ENST00000621131 OR51V1Q9H2C8 321 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 LIN28AQ9H9Z2 209 aaKnown RBP4.03□□□□□ -1.76
VPS29-212ENST00000621131 MCCC2Q9HCC0 563 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 EXOSC4Q9NPD3 245 aaKnown RBP4.03□□□□□ -1.76
VPS29-212ENST00000621131 MEPEQ9NQ76 525 aaPredicted RBP4.03□□□□□ -1.76
VPS29-212ENST00000621131 B4GALT7Q9UBV7 327 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 CHRNA9Q9UGM1 479 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 IL20RAQ9UHF4 553 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 FBXL4Q9UKA2 621 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 STUB1Q9UNE7 303 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 SSR3Q9UNL2 185 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 GSTK1Q9Y2Q3 226 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 IER3IP1Q9Y5U9 82 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 CELSR2Q9HCU4 2923 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 ABCA2Q9BZC7 2435 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 IGLV3-32A0A0A0MS00 114 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 LOC100506127A0A0U1RQW1 187 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 TMEM72A0PK05 275 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 NPIPA5E9PKD4 350 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 C11orf98E9PRG8 122 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 ZNF670-ZNF695F2Z2N8 137 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 J3QKU1 62 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 KLF7O75840 302 aaPredicted RBP4.02□□□□□ -1.77
VPS29-212ENST00000621131 CDK2AP2O75956 126 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms