RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 GPM6AP51674 278 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 LCN2P80188 198 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 FOXK2Q01167 660 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 ASTLQ6HA08 431 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 PIMREGQ9BSJ6 248 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 MEGF9Q9H1U4 602 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 DOCK9Q9BZ29 2069 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 A0A1W2PRS3 328 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 C1QTNF3-AMACRE9PGA6 284 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 CD79AP11912 226 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 PXNP49023 591 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 NANOS1Q8WY41 292 aaKnown RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 FAM71F1Q96KD3 344 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 DERL1Q9BUN8 251 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 TMEM238C9JI98 176 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 H3BSH0 61 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 H7C1C5 153 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 UMODP07911 640 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 TNFSF10P50591 281 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 DUSP3P51452 185 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 FZD5Q13467 585 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 DOC2BQ14184 412 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 ZNF765Q7L2R6 523 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 OR8I2Q8N0Y5 310 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 SOX21Q9Y651 276 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 EDDM13A0A1B0GTR0 161 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 SLC5A10A0PJK1 596 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 FAM183AA6NL82 134 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 CBR3O75828 277 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 SNCGO76070 127 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 SMIM13P0DJ93 91 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 CD68P34810 354 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 EMP1P54849 157 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 RPS26P11Q5JNZ5 115 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 C12orf73Q69YU5 71 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 FBXL22Q6P050 247 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 UMODL1-AS1Q8N2C9 162 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 CELF5Q8N6W0 485 aaKnown RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 MSI2Q96DH6 328 aaKnown RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 OR1F2PQ96R84 312 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 HIST1H2BLQ99880 126 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 WDR61Q9GZS3 305 aaKnown RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 NPDC1Q9NQX5 325 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 NECAP2Q9NVZ3 263 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 SLC7A7Q9UM01 511 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 TRBV23OR9-2A0A075B6M9 112 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 NKX2-1P43699 371 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 MVDP53602 400 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 GRB2P62993 217 aaKnown RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 GABRA6Q16445 453 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 C8orf82Q6P1X6 216 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 PARS2Q7L3T8 475 aaKnown RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 NKX2-4Q9H2Z4 354 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 UTS2O95399 124 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 JMJD7P0C870 316 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 IRF1P10914 325 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 GP1BBP13224 206 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 PRPH2P23942 346 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 SMAGPQ0VAQ4 97 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 SDHCQ99643 169 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 ENTPD2Q9Y5L3 495 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 A0A1B0GW15 77 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 CDIPTO14735 213 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 SYNGR4O95473 234 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 PPP1R3DO95685 299 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 MPC1LP0DKB6 136 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 HRH1P35367 487 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 TDGF1P3P51864 188 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 SMAD3P84022 425 aaKnown RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 AESQ08117 197 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 ZFAND6Q6FIF0 208 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 DGAT2L6Q6ZPD8 337 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 OR6J1Q8NGC5 347 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 IGSF21Q96ID5 467 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 FIZ1Q96SL8 496 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 SPANXDQ9BXN6 97 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 AUNIPQ9H7T9 357 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 CLDN5O00501 218 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 PPP1R11O60927 126 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 SOD3P08294 240 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 CTSEP14091 401 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 BSXQ3C1V8 233 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 PARM1Q6UWI2 310 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 ACER1Q8TDN7 264 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 B3GAT1Q9P2W7 334 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 TAPBPO15533 448 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 PEX11BO96011 259 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 HKR1P10072 659 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 CYBAP13498 195 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 WNT3P56703 355 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 SRSF5Q13243 272 aaKnown RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 RTN4IP1Q8WWV3 396 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 ROBO4Q8WZ75 1007 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 WNK2Q9Y3S1 2297 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 APCSP02743 223 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 TMEM225BP0DP42 221 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 POU3F2P20265 443 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 ZNF252P-AS1Q0IIN9 211 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 CNN3Q15417 329 aaKnown RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 TGIF2LYQ8IUE0 185 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms