RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 TBX15Q96SF7 602 aa13.64□□□□□ -0.23
SHKBP1-215ENST00000597649 CNN2Q99439 309 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-215ENST00000597649 ZNF184Q99676 751 aaPredicted RBP13.64□□□□□ -0.23
SHKBP1-215ENST00000597649 PCGF1Q9BSM1 259 aa13.64□□□□□ -0.23
SHKBP1-215ENST00000597649 Q9H521 79 aa13.64□□□□□ -0.23
SHKBP1-215ENST00000597649 RAB26Q9ULW5 256 aa13.64□□□□□ -0.23
SHKBP1-215ENST00000597649 A0A1B0GWJ7 208 aa13.63□□□□□ -0.23
SHKBP1-215ENST00000597649 SELENOFO60613 162 aa13.63□□□□□ -0.23
SHKBP1-215ENST00000597649 HLA-DPB1P04440 258 aa13.63□□□□□ -0.23
SHKBP1-215ENST00000597649 GNAO1P09471 354 aa13.63□□□□□ -0.23
SHKBP1-215ENST00000597649 GABRB1P18505 474 aa13.63□□□□□ -0.23
SHKBP1-215ENST00000597649 CFHR2P36980 270 aa13.63□□□□□ -0.23
SHKBP1-215ENST00000597649 PSMB10P40306 273 aa13.63□□□□□ -0.23
SHKBP1-215ENST00000597649 RPS27P42677 84 aaKnown RBP13.63□□□□□ -0.23
SHKBP1-215ENST00000597649 PRSS12P56730 875 aa13.63□□□□□ -0.23
SHKBP1-215ENST00000597649 MAB21L1Q13394 359 aa13.63□□□□□ -0.23
SHKBP1-215ENST00000597649 EIF2B1Q14232 305 aaKnown RBP13.63□□□□□ -0.23
SHKBP1-215ENST00000597649 RSPO1Q2MKA7 263 aaPredicted RBP13.63□□□□□ -0.23
SHKBP1-215ENST00000597649 TEX30Q5JUR7 227 aa13.63□□□□□ -0.23
SHKBP1-215ENST00000597649 NLRC3Q7RTR2 1065 aa13.63□□□□□ -0.23
SHKBP1-215ENST00000597649 SLC16A9Q7RTY1 509 aa13.63□□□□□ -0.23
SHKBP1-215ENST00000597649 THAP5Q7Z6K1 395 aa13.63□□□□□ -0.23
SHKBP1-215ENST00000597649 OR51G2Q8NGK0 314 aa13.63□□□□□ -0.23
SHKBP1-215ENST00000597649 CYB5R1Q9UHQ9 305 aa13.63□□□□□ -0.23
SHKBP1-215ENST00000597649 ZNF281Q9Y2X9 895 aa13.63□□□□□ -0.23
SHKBP1-215ENST00000597649 LHFPL6Q9Y693 200 aa13.63□□□□□ -0.23
SHKBP1-215ENST00000597649 PHYHO14832 338 aa13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 RER1O15258 196 aa13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 GPR137BO60478 399 aa13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 IGHV4-59P01825 116 aa13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 ISL1P61371 349 aa13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 TAF13Q15543 124 aa13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 SLC18B1Q6NT16 456 aa13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 DCDC5Q6ZRR9 648 aa13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 DPY19L4Q7Z388 723 aa13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 DCXRQ7Z4W1 244 aa13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 TIGD4Q8IY51 512 aa13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 ZNF454Q8N9F8 522 aa13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 BHLHE23Q8NDY6 225 aa13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 FAM110DQ8TAY7 271 aaPredicted RBP13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 CNIH3Q8TBE1 160 aa13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 THEM6Q8WUY1 208 aa13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 SSMEM1Q8WWF3 244 aa13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 DYRK2Q92630 601 aa13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 RNFT2Q96EX2 444 aa13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 YIPF3Q9GZM5 350 aa13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 HAO2Q9NYQ3 351 aa13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 CTSZQ9UBR2 303 aa13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 RPL36Q9Y3U8 105 aaKnown RBP13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 POMT1Q9Y6A1 747 aa13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 TMEM14AQ9Y6G1 99 aa13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 NOTCH3Q9UM47 2321 aa13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 RYR3Q15413 4870 aa13.62□□□□□ -0.23
SHKBP1-215ENST00000597649 LRRC30A6NM36 301 aa13.61□□□□□ -0.23
SHKBP1-215ENST00000597649 IQCF6A8MYZ5 107 aa13.61□□□□□ -0.23
SHKBP1-215ENST00000597649 ZNF879B4DU55 563 aa13.61□□□□□ -0.23
SHKBP1-215ENST00000597649 P2RY10O00398 339 aa13.61□□□□□ -0.23
SHKBP1-215ENST00000597649 ENSAO43768 121 aaKnown RBP13.61□□□□□ -0.23
SHKBP1-215ENST00000597649 GATA4P43694 442 aa13.61□□□□□ -0.23
SHKBP1-215ENST00000597649 PDCD1Q15116 288 aa13.61□□□□□ -0.23
SHKBP1-215ENST00000597649 SLC35F2Q8IXU6 374 aa13.61□□□□□ -0.23
SHKBP1-215ENST00000597649 Q8TCH9 128 aa13.61□□□□□ -0.23
SHKBP1-215ENST00000597649 APH1BQ8WW43 257 aa13.61□□□□□ -0.23
SHKBP1-215ENST00000597649 MNTQ99583 582 aa13.61□□□□□ -0.23
SHKBP1-215ENST00000597649 HDHD2Q9H0R4 259 aa13.61□□□□□ -0.23
SHKBP1-215ENST00000597649 TCF7L1Q9HCS4 588 aa13.61□□□□□ -0.23
SHKBP1-215ENST00000597649 AMBNQ9NP70 447 aa13.61□□□□□ -0.23
SHKBP1-215ENST00000597649 CENPMQ9NSP4 180 aa13.61□□□□□ -0.23
SHKBP1-215ENST00000597649 TMEM100Q9NV29 134 aa13.61□□□□□ -0.23
SHKBP1-215ENST00000597649 LAMP5Q9UJQ1 280 aa13.61□□□□□ -0.23
SHKBP1-215ENST00000597649 ZNF670-ZNF695F2Z2N8 137 aa13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 J3QW42 95 aa13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 FAM20BO75063 409 aa13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 WBP4O75554 376 aaKnown RBP13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 FCN3O75636 299 aa13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 TOX4O94842 621 aa13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 APOL3O95236 402 aa13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 LYNP07948 512 aa13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 DBTP11182 482 aaKnown RBP13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 MYF6P23409 242 aa13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 RGS6P49758 472 aa13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 RPL15P61313 204 aaKnown RBP13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 HIST1H3AP68431 136 aa13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 ZNF91Q05481 1191 aa13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 ECH1Q13011 328 aa13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 MPPED2Q15777 294 aa13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 PCK2Q16822 640 aa13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 FBLN7Q53RD9 439 aa13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 HIST2H3PS2Q5TEC6 136 aa13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 CFAP77Q6ZQR2 320 aa13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 HIST2H3AQ71DI3 136 aa13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 C1orf87Q8N0U7 546 aa13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 OR5L1Q8NGL2 311 aa13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 OTOSQ8NHW6 89 aa13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 TBC1D15Q8TC07 691 aa13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 GATAD2BQ8WXI9 593 aa13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 APOBEC3DQ96AK3 386 aaPredicted RBP13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 SLAMF6Q96DU3 332 aa13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 CNBD2Q96M20 576 aa13.6□□□□□ -0.23
SHKBP1-215ENST00000597649 WDFY2Q96P53 400 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms