RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 GATAD2BQ8WXI9 593 aa13.13□□□□□ -0.31
CRLF3-203ENST00000578692 OR5P3Q8WZ94 311 aa13.13□□□□□ -0.31
CRLF3-203ENST00000578692 TAF15Q92804 592 aaKnown RBP eCLIP13.13□□□□□ -0.31
CRLF3-203ENST00000578692 C12orf43Q96C57 262 aaKnown RBP13.13□□□□□ -0.31
CRLF3-203ENST00000578692 SEH1LQ96EE3 360 aa13.13□□□□□ -0.31
CRLF3-203ENST00000578692 NRBF2Q96F24 287 aa13.13□□□□□ -0.31
CRLF3-203ENST00000578692 RNF170Q96K19 258 aa13.13□□□□□ -0.31
CRLF3-203ENST00000578692 TEAD3Q99594 435 aa13.13□□□□□ -0.31
CRLF3-203ENST00000578692 ABCB9Q9NP78 766 aa13.13□□□□□ -0.31
CRLF3-203ENST00000578692 RPUSD1Q9UJJ7 312 aaKnown RBP13.13□□□□□ -0.31
CRLF3-203ENST00000578692 ZNF391Q9UJN7 358 aa13.13□□□□□ -0.31
CRLF3-203ENST00000578692 LRP12Q9Y561 859 aa13.13□□□□□ -0.31
CRLF3-203ENST00000578692 A0A1B0GW55 424 aa13.12□□□□□ -0.31
CRLF3-203ENST00000578692 TMEM210A6NLX4 147 aa13.12□□□□□ -0.31
CRLF3-203ENST00000578692 DUX4L2P0CJ85 424 aa13.12□□□□□ -0.31
CRLF3-203ENST00000578692 DUX4L3P0CJ86 424 aa13.12□□□□□ -0.31
CRLF3-203ENST00000578692 DUX4L4P0CJ87 422 aa13.12□□□□□ -0.31
CRLF3-203ENST00000578692 DUX4L5P0CJ88 424 aa13.12□□□□□ -0.31
CRLF3-203ENST00000578692 DUX4L6P0CJ89 424 aa13.12□□□□□ -0.31
CRLF3-203ENST00000578692 DUX4L7P0CJ90 424 aa13.12□□□□□ -0.31
CRLF3-203ENST00000578692 PSMA6P60900 246 aaKnown RBP13.12□□□□□ -0.31
CRLF3-203ENST00000578692 FAM76BQ5HYJ3 339 aa13.12□□□□□ -0.31
CRLF3-203ENST00000578692 KCTD18Q6PI47 426 aaPredicted RBP13.12□□□□□ -0.31
CRLF3-203ENST00000578692 DEGS2Q6QHC5 323 aa13.12□□□□□ -0.31
CRLF3-203ENST00000578692 DUX4L9Q6RFH8 374 aaPredicted RBP13.12□□□□□ -0.31
CRLF3-203ENST00000578692 FGFRL1Q8N441 504 aa13.12□□□□□ -0.31
CRLF3-203ENST00000578692 OR5T2Q8NGG2 359 aa13.12□□□□□ -0.31
CRLF3-203ENST00000578692 OR10Z1Q8NGY1 313 aa13.12□□□□□ -0.31
CRLF3-203ENST00000578692 DNAJC9Q8WXX5 260 aa13.12□□□□□ -0.31
CRLF3-203ENST00000578692 RPL3LQ92901 407 aaKnown RBP13.12□□□□□ -0.31
CRLF3-203ENST00000578692 LHX4Q969G2 390 aa13.12□□□□□ -0.31
CRLF3-203ENST00000578692 TMIGD2Q96BF3 282 aa13.12□□□□□ -0.31
CRLF3-203ENST00000578692 FAM71F1Q96KD3 344 aaPredicted RBP13.12□□□□□ -0.31
CRLF3-203ENST00000578692 PKP2Q99959 881 aa13.12□□□□□ -0.31
CRLF3-203ENST00000578692 YIPF3Q9GZM5 350 aa13.12□□□□□ -0.31
CRLF3-203ENST00000578692 PAPOLBQ9NRJ5 636 aaKnown RBP13.12□□□□□ -0.31
CRLF3-203ENST00000578692 TNFRSF19Q9NS68 423 aa13.12□□□□□ -0.31
CRLF3-203ENST00000578692 ACOXLQ9NUZ1 547 aa13.12□□□□□ -0.31
CRLF3-203ENST00000578692 HAO2Q9NYQ3 351 aa13.12□□□□□ -0.31
CRLF3-203ENST00000578692 DUX4Q9UBX2 424 aa13.12□□□□□ -0.31
CRLF3-203ENST00000578692 NBEAL1Q6ZS30 2694 aa13.11□□□□□ -0.31
CRLF3-203ENST00000578692 IGHV1-69DA0A0B4J2H0 117 aa13.11□□□□□ -0.31
CRLF3-203ENST00000578692 ACOD1A6NK06 481 aa13.11□□□□□ -0.31
CRLF3-203ENST00000578692 PSMD9O00233 223 aa13.11□□□□□ -0.31
CRLF3-203ENST00000578692 GPR37O15354 613 aa13.11□□□□□ -0.31
CRLF3-203ENST00000578692 NDUFB3O43676 98 aa13.11□□□□□ -0.31
CRLF3-203ENST00000578692 IGHV1-69P01742 117 aa13.11□□□□□ -0.31
CRLF3-203ENST00000578692 AMY2BP19961 511 aa13.11□□□□□ -0.31
CRLF3-203ENST00000578692 MAP2K3P46734 347 aa13.11□□□□□ -0.31
CRLF3-203ENST00000578692 TGM4P49221 684 aa13.11□□□□□ -0.31
CRLF3-203ENST00000578692 DAPP51397 102 aa13.11□□□□□ -0.31
CRLF3-203ENST00000578692 GMFBP60983 142 aa13.11□□□□□ -0.31
CRLF3-203ENST00000578692 PTGES3Q15185 160 aaKnown RBP13.11□□□□□ -0.31
CRLF3-203ENST00000578692 ATPAF1Q5TC12 328 aaPredicted RBP13.11□□□□□ -0.31
CRLF3-203ENST00000578692 KCTD8Q6ZWB6 473 aa13.11□□□□□ -0.31
CRLF3-203ENST00000578692 FAM216BQ8N7L0 139 aa13.11□□□□□ -0.31
CRLF3-203ENST00000578692 SCCPDHQ8NBX0 429 aa13.11□□□□□ -0.31
CRLF3-203ENST00000578692 LY6G5BQ8NDX9 201 aa13.11□□□□□ -0.31
CRLF3-203ENST00000578692 HIST1H2AAQ96QV6 131 aa13.11□□□□□ -0.31
CRLF3-203ENST00000578692 MROQ9BYG7 248 aa13.11□□□□□ -0.31
CRLF3-203ENST00000578692 DNAJB11Q9UBS4 358 aa13.11□□□□□ -0.31
CRLF3-203ENST00000578692 KPTNQ9Y664 436 aa13.11□□□□□ -0.31
CRLF3-203ENST00000578692 TMEM269A0A1B0GVZ9 245 aa13.1□□□□□ -0.31
CRLF3-203ENST00000578692 FAM181BA6NEQ2 426 aa13.1□□□□□ -0.31
CRLF3-203ENST00000578692 GSC2O15499 205 aa13.1□□□□□ -0.31
CRLF3-203ENST00000578692 CRYBA1P05813 215 aa13.1□□□□□ -0.31
CRLF3-203ENST00000578692 MELTFP08582 738 aa13.1□□□□□ -0.31
CRLF3-203ENST00000578692 MDKP21741 143 aaPredicted RBP13.1□□□□□ -0.31
CRLF3-203ENST00000578692 OMGP23515 440 aa13.1□□□□□ -0.31
CRLF3-203ENST00000578692 IKZF1Q13422 519 aa13.1□□□□□ -0.31
CRLF3-203ENST00000578692 CDONQ4KMG0 1287 aa13.1□□□□□ -0.31
CRLF3-203ENST00000578692 STUMQ69YW2 141 aa13.1□□□□□ -0.31
CRLF3-203ENST00000578692 FAHD1Q6P587 224 aa13.1□□□□□ -0.31
CRLF3-203ENST00000578692 ZDHHC23Q8IYP9 409 aa13.1□□□□□ -0.31
CRLF3-203ENST00000578692 TMEM86BQ8N661 226 aa13.1□□□□□ -0.31
CRLF3-203ENST00000578692 FAM81AQ8TBF8 368 aa13.1□□□□□ -0.31
CRLF3-203ENST00000578692 DMRTB1Q96MA1 342 aa13.1□□□□□ -0.31
CRLF3-203ENST00000578692 FGF23Q9GZV9 251 aaPredicted RBP13.1□□□□□ -0.31
CRLF3-203ENST00000578692 DNTTIP1Q9H147 329 aa13.1□□□□□ -0.31
CRLF3-203ENST00000578692 WDR13Q9H1Z4 485 aa13.1□□□□□ -0.31
CRLF3-203ENST00000578692 SNTG1Q9NSN8 517 aa13.1□□□□□ -0.31
CRLF3-203ENST00000578692 FAM53CQ9NYF3 392 aa13.1□□□□□ -0.31
CRLF3-203ENST00000578692 A0A0U1RQV5 110 aa13.09□□□□□ -0.31
CRLF3-203ENST00000578692 ZNF816-ZNF321PA0A0X1KG74 233 aa13.09□□□□□ -0.31
CRLF3-203ENST00000578692 CCDC182A6NF36 153 aa13.09□□□□□ -0.31
CRLF3-203ENST00000578692 AKR7A2O43488 359 aa13.09□□□□□ -0.31
CRLF3-203ENST00000578692 ZNF254O75437 659 aa13.09□□□□□ -0.31
CRLF3-203ENST00000578692 MRPL3P09001 348 aaKnown RBP13.09□□□□□ -0.31
CRLF3-203ENST00000578692 DCTDP32321 178 aa13.09□□□□□ -0.31
CRLF3-203ENST00000578692 ESRRGP62508 458 aa13.09□□□□□ -0.31
CRLF3-203ENST00000578692 LRRC10Q5BKY1 277 aa13.09□□□□□ -0.31
CRLF3-203ENST00000578692 LCN1P1Q5VSP4 162 aa13.09□□□□□ -0.31
CRLF3-203ENST00000578692 FIP1L1Q6UN15 594 aaKnown RBP13.09□□□□□ -0.31
CRLF3-203ENST00000578692 KRT74Q7RTS7 529 aa13.09□□□□□ -0.31
CRLF3-203ENST00000578692 VMO1Q7Z5L0 202 aa13.09□□□□□ -0.31
CRLF3-203ENST00000578692 PDZD9Q8IXQ8 264 aa13.09□□□□□ -0.31
CRLF3-203ENST00000578692 ZNF679Q8IYX0 411 aa13.09□□□□□ -0.31
CRLF3-203ENST00000578692 OR5K1Q8NHB7 308 aa13.09□□□□□ -0.31
CRLF3-203ENST00000578692 HPSE2Q8WWQ2 592 aa13.09□□□□□ -0.31
CRLF3-203ENST00000578692 ITFG2Q969R8 447 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms