RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 HCCSP53701 268 aa9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 GRB2P62993 217 aaKnown RBP9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 EGR3Q06889 387 aa9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 PRDX4Q13162 271 aa9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 SLC35E4Q6ICL7 350 aa9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 HCP5Q6MZN7 132 aa9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 ZNF788Q6ZQV5 615 aa9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 OR2T33Q8NG76 320 aa9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 ANGPTL6Q8NI99 470 aa9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 PPP1R35Q8TAP8 253 aa9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 OR5P3Q8WZ94 311 aa9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 H1FXQ92522 213 aaKnown RBP9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 RORBQ92753 470 aa9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 OTULINQ96BN8 352 aa9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 PGAM5Q96HS1 289 aa9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 RAB3IPQ96QF0 476 aaPredicted RBP9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 INTS14Q96SY0 518 aa9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 DGCR6LQ9BY27 220 aa9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 OR51V1Q9H2C8 321 aa9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 OPA3Q9H6K4 179 aa9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 SP140LQ9H930 580 aa9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 TCF7L1Q9HCS4 588 aa9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 CMC2Q9NRP2 79 aa9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 HAO2Q9NYQ3 351 aa9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 ACTR3BQ9P1U1 418 aa9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 FAM96BQ9Y3D0 163 aa9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 SAMHD1Q9Y3Z3 626 aaKnown RBP9.45□□□□□ -0.9
PRPF40B-212ENST00000551111 SLC22A31A6NKX4 558 aa9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 TIMM23O14925 209 aa9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 NDUFB3O43676 98 aa9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 GRK5P34947 590 aa9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 SAA4P35542 130 aa9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 SLC15A1P46059 708 aa9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 ERVFRD-1P60508 538 aa9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 RPL15P61313 204 aaKnown RBP9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 ATPAF1Q5TC12 328 aaPredicted RBP9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 OR2T5Q6IEZ7 315 aa9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 METAP1DQ6UB28 335 aaPredicted RBP9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 SLC36A1Q7Z2H8 476 aa9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 PIGWQ7Z7B1 504 aa9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 CPLX4Q7Z7G2 160 aa9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 GALNT4Q8N4A0 578 aa9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 BBS1Q8NFJ9 593 aa9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 OR2T29Q8NH02 315 aa9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 C8orf46Q8TAG6 207 aa9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 PIGCQ92535 297 aa9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 PPP1R14AQ96A00 147 aa9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 FEVQ99581 238 aa9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 DPAGT1Q9H3H5 408 aa9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 C16orf95Q9H693 158 aa9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 VPREB3Q9UKI3 123 aa9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 BAIAP2Q9UQB8 552 aa9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 KIAA2026Q5HYC2 2103 aa9.44□□□□□ -0.9
PRPF40B-212ENST00000551111 IGKV1D-17A0A075B6S4 117 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 MEIOCA2RUB1 952 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 RIIAD1A6NNX1 92 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 PRR32B1ATL7 298 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 B2RBV5 119 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 PSMD9O00233 223 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 TSPAN9O75954 239 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 GLCEO94923 617 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 FBP1P09467 338 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 H2BFMP0C1H6 154 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 ZNF3P17036 446 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 NAA10P41227 235 aaPredicted RBP9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 MZT1Q08AG7 82 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 C11orf91Q3C1V1 193 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 FAM76BQ5HYJ3 339 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 DHRS7BQ6IAN0 325 aaPredicted RBP9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 PLBD1Q6P4A8 553 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 C16orf89Q6UX73 402 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 GDPGP1Q6ZNW5 385 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 HS3ST5Q8IZT8 346 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 ZNRF1Q8ND25 227 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 OR10G2Q8NGC3 310 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 OR8B12Q8NGG6 310 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 THEM6Q8WUY1 208 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 UBE2FQ969M7 185 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 RNF170Q96K19 258 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 CLPTM1LQ96KA5 538 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 MICU1Q9BPX6 476 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 OR10A2Q9H208 303 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 PPA2Q9H2U2 334 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 TOR3AQ9H497 397 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 FOXJ3Q9UPW0 622 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 MAB21L2Q9Y586 359 aa9.43□□□□□ -0.9
PRPF40B-212ENST00000551111 TIPRLO75663 272 aa9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 CST4P01036 141 aa9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 IFNGP01579 166 aa9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 PRB2P02812 416 aaPredicted RBP9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 ACAA1P09110 424 aaPredicted RBP9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 PSG2P11465 335 aa9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 NDUFB7P17568 137 aa9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 GNALP38405 381 aa9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 GPM6AP51674 278 aa9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 LY6EQ16553 131 aa9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 LRRC10Q5BKY1 277 aa9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 CEP78Q5JTW2 689 aa9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 LCN8Q6JVE9 175 aa9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 KCTD8Q6ZWB6 473 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms