RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 RAB1AP62820 205 aa16.62■□□□□ 0.25
BRF1-215ENST00000549655 OR51S1Q8NGJ8 323 aa16.62■□□□□ 0.25
BRF1-215ENST00000549655 SPSB1Q96BD6 273 aa16.62■□□□□ 0.25
BRF1-215ENST00000549655 CST11Q9H112 138 aa16.62■□□□□ 0.25
BRF1-215ENST00000549655 C5orf49A4QMS7 147 aa16.61■□□□□ 0.25
BRF1-215ENST00000549655 SOCS1O15524 211 aa16.61■□□□□ 0.25
BRF1-215ENST00000549655 IL18BPO95998 194 aa16.61■□□□□ 0.25
BRF1-215ENST00000549655 CCL2P13500 99 aa16.61■□□□□ 0.25
BRF1-215ENST00000549655 OR3A2P47893 321 aa16.61■□□□□ 0.25
BRF1-215ENST00000549655 MTCP1P56278 107 aa16.61■□□□□ 0.25
BRF1-215ENST00000549655 RBMS2Q15434 407 aaKnown RBP16.61■□□□□ 0.25
BRF1-215ENST00000549655 FAM189A2Q15884 450 aa16.61■□□□□ 0.25
BRF1-215ENST00000549655 CLVS2Q5SYC1 327 aa16.61■□□□□ 0.25
BRF1-215ENST00000549655 TRAPPC6BQ86SZ2 158 aa16.61■□□□□ 0.25
BRF1-215ENST00000549655 RTN4RL2Q86UN3 420 aa16.61■□□□□ 0.25
BRF1-215ENST00000549655 ZNF584Q8IVC4 421 aa16.61■□□□□ 0.25
BRF1-215ENST00000549655 SPSB4Q96A44 273 aa16.61■□□□□ 0.25
BRF1-215ENST00000549655 ZNF486Q96H40 463 aaPredicted RBP16.61■□□□□ 0.25
BRF1-215ENST00000549655 TRIB1Q96RU8 372 aa16.61■□□□□ 0.25
BRF1-215ENST00000549655 S100A13Q99584 98 aa16.61■□□□□ 0.25
BRF1-215ENST00000549655 URM1Q9BTM9 101 aaKnown RBP16.61■□□□□ 0.25
BRF1-215ENST00000549655 PRAF2O60831 178 aa16.6■□□□□ 0.25
BRF1-215ENST00000549655 SS18L1O75177 396 aaPredicted RBP16.6■□□□□ 0.25
BRF1-215ENST00000549655 RAB3DO95716 219 aa16.6■□□□□ 0.25
BRF1-215ENST00000549655 NRASP01111 189 aa16.6■□□□□ 0.25
BRF1-215ENST00000549655 MAB21L1Q13394 359 aa16.6■□□□□ 0.25
BRF1-215ENST00000549655 CNN3Q15417 329 aaKnown RBP16.6■□□□□ 0.25
BRF1-215ENST00000549655 OR8B8Q15620 311 aa16.6■□□□□ 0.25
BRF1-215ENST00000549655 CD276Q5ZPR3 534 aa16.6■□□□□ 0.25
BRF1-215ENST00000549655 TMEM42Q69YG0 159 aa16.6■□□□□ 0.25
BRF1-215ENST00000549655 TMEM53Q6P2H8 277 aa16.6■□□□□ 0.25
BRF1-215ENST00000549655 FGD2Q7Z6J4 655 aa16.6■□□□□ 0.25
BRF1-215ENST00000549655 NOXA1Q86UR1 476 aa16.6■□□□□ 0.25
BRF1-215ENST00000549655 OR1K1Q8NGR3 316 aa16.6■□□□□ 0.25
BRF1-215ENST00000549655 NUDCD2Q8WVJ2 157 aa16.6■□□□□ 0.25
BRF1-215ENST00000549655 RAB3CQ96E17 227 aa16.6■□□□□ 0.25
BRF1-215ENST00000549655 GINS4Q9BRT9 223 aa16.6■□□□□ 0.25
BRF1-215ENST00000549655 GLRX2Q9NS18 164 aa16.6■□□□□ 0.25
BRF1-215ENST00000549655 ZNF107Q9UII5 783 aaPredicted RBP16.6■□□□□ 0.25
BRF1-215ENST00000549655 CFAP47Q6ZTR5 3102 aa16.6■□□□□ 0.25
BRF1-215ENST00000549655 A0A1B0GUH1 482 aa16.6■□□□□ 0.25
BRF1-215ENST00000549655 FAM230AA0A1W2PPH8 454 aa16.6■□□□□ 0.25
BRF1-215ENST00000549655 ZNF736B4DX44 427 aaPredicted RBP16.6■□□□□ 0.25
BRF1-215ENST00000549655 HPXP02790 462 aa16.6■□□□□ 0.25
BRF1-215ENST00000549655 PRKACBP22694 351 aa16.6■□□□□ 0.25
BRF1-215ENST00000549655 ZNF169Q14929 603 aaPredicted RBP16.6■□□□□ 0.25
BRF1-215ENST00000549655 HIKESHIQ53FT3 197 aa16.6■□□□□ 0.25
BRF1-215ENST00000549655 PLAC9Q5JTB6 97 aa16.6■□□□□ 0.25
BRF1-215ENST00000549655 OR11H7Q8NGC8 314 aa16.6■□□□□ 0.25
BRF1-215ENST00000549655 OR56B1Q8NGI3 324 aa16.6■□□□□ 0.25
BRF1-215ENST00000549655 OR10K1Q8NGX5 313 aa16.6■□□□□ 0.25
BRF1-215ENST00000549655 M0QYG6 137 aa16.59■□□□□ 0.25
BRF1-215ENST00000549655 MGMTP16455 207 aa16.59■□□□□ 0.25
BRF1-215ENST00000549655 ANXA7P20073 488 aaKnown RBP16.59■□□□□ 0.25
BRF1-215ENST00000549655 SERPINA2P20848 420 aa16.59■□□□□ 0.25
BRF1-215ENST00000549655 RAD52P43351 418 aa16.59■□□□□ 0.25
BRF1-215ENST00000549655 RPS27AP62979 156 aaKnown RBP16.59■□□□□ 0.25
BRF1-215ENST00000549655 PLP2Q04941 152 aa16.59■□□□□ 0.25
BRF1-215ENST00000549655 IGFL3Q6UXB1 125 aa16.59■□□□□ 0.25
BRF1-215ENST00000549655 GCNT2Q8N0V5 402 aa16.59■□□□□ 0.25
BRF1-215ENST00000549655 OR51T1Q8NGJ9 327 aa16.59■□□□□ 0.25
BRF1-215ENST00000549655 OR5M9Q8NGP3 310 aa16.59■□□□□ 0.25
BRF1-215ENST00000549655 BCL2L2Q92843 193 aaPredicted RBP16.59■□□□□ 0.25
BRF1-215ENST00000549655 SARAFQ96BY9 339 aa16.59■□□□□ 0.25
BRF1-215ENST00000549655 MS4A3Q96HJ5 214 aa16.59■□□□□ 0.25
BRF1-215ENST00000549655 TAAR6Q96RI8 345 aa16.59■□□□□ 0.25
BRF1-215ENST00000549655 ELL3Q9HB65 397 aaPredicted RBP16.59■□□□□ 0.25
BRF1-215ENST00000549655 PYCARD-AS1I3L0S3 204 aa16.58■□□□□ 0.25
BRF1-215ENST00000549655 SSNA1O43805 119 aa16.58■□□□□ 0.25
BRF1-215ENST00000549655 CD74P04233 296 aa16.58■□□□□ 0.25
BRF1-215ENST00000549655 TMEM50BP56557 158 aa16.58■□□□□ 0.25
BRF1-215ENST00000549655 ZP1P60852 638 aa16.58■□□□□ 0.25
BRF1-215ENST00000549655 METTL11BQ5VVY1 283 aa16.58■□□□□ 0.25
BRF1-215ENST00000549655 GVQW1Q8N7I0 195 aa16.58■□□□□ 0.25
BRF1-215ENST00000549655 OR4S1Q8NGB4 309 aa16.58■□□□□ 0.25
BRF1-215ENST00000549655 POM121L2Q96KW2 1035 aa16.58■□□□□ 0.25
BRF1-215ENST00000549655 TINAGL1Q9GZM7 467 aaPredicted RBP16.58■□□□□ 0.25
BRF1-215ENST00000549655 KCNK7Q9Y2U2 307 aa16.58■□□□□ 0.25
BRF1-215ENST00000549655 AKAP13Q12802 2813 aa16.58■□□□□ 0.24
BRF1-215ENST00000549655 IGKV1-27A0A075B6S5 117 aa16.58■□□□□ 0.24
BRF1-215ENST00000549655 GSTP1P09211 210 aaKnown RBP16.58■□□□□ 0.24
BRF1-215ENST00000549655 TMEM225BP0DP42 221 aa16.58■□□□□ 0.24
BRF1-215ENST00000549655 HIST1H1DP16402 221 aaKnown RBP16.58■□□□□ 0.24
BRF1-215ENST00000549655 MECP2P51608 486 aaKnown RBP16.58■□□□□ 0.24
BRF1-215ENST00000549655 GLDNQ6ZMI3 551 aaPredicted RBP16.58■□□□□ 0.24
BRF1-215ENST00000549655 DPPA2Q7Z7J5 298 aa16.58■□□□□ 0.24
BRF1-215ENST00000549655 FAM89BQ8N5H3 189 aa16.58■□□□□ 0.24
BRF1-215ENST00000549655 CPNE2Q96FN4 548 aaPredicted RBP16.58■□□□□ 0.24
BRF1-215ENST00000549655 SEC22CQ9BRL7 303 aa16.58■□□□□ 0.24
BRF1-215ENST00000549655 NPDC1Q9NQX5 325 aaPredicted RBP16.58■□□□□ 0.24
BRF1-215ENST00000549655 PLSCR2Q9NRY7 297 aa16.58■□□□□ 0.24
BRF1-215ENST00000549655 ZNF816-ZNF321PA0A0X1KG74 233 aa16.57■□□□□ 0.24
BRF1-215ENST00000549655 SSX5O60225 188 aa16.57■□□□□ 0.24
BRF1-215ENST00000549655 MRPS15P82914 257 aaKnown RBP16.57■□□□□ 0.24
BRF1-215ENST00000549655 STEAP2Q8NFT2 490 aa16.57■□□□□ 0.24
BRF1-215ENST00000549655 PIGCQ92535 297 aa16.57■□□□□ 0.24
BRF1-215ENST00000549655 APOBEC3DQ96AK3 386 aaPredicted RBP16.57■□□□□ 0.24
BRF1-215ENST00000549655 BORCS8Q96FH0 119 aa16.57■□□□□ 0.24
BRF1-215ENST00000549655 IFT46Q9NQC8 304 aa16.57■□□□□ 0.24
BRF1-215ENST00000549655 ZNF222Q9UK12 451 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms