RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 PPP4R1LQ9P1A2 415 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 MBD2Q9UBB5 411 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 MRPS28Q9Y2Q9 187 aaKnown RBP4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 WIF1Q9Y5W5 379 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 TRIOO75962 3097 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 SEC16AO15027 2179 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 IGKV1-9A0A0C4DH69 117 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 AQP7P3A6NL99 342 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 NUDT19A8MXV4 375 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 H0YIZ8 118 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 H3BML4 177 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 CA11O75493 328 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 ZFAND5O76080 213 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 TIAF1O95411 115 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 SFT2D2O95562 160 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 APOC3P02656 99 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 IFNA6P05013 189 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 CYC1P08574 325 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 H2AFB1P0C5Y9 115 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 MYF5P13349 255 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 RPS2P15880 293 aaKnown RBP4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 PNLIPP16233 465 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 AKR1C4P17516 323 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 FPR2P25090 351 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 FKBP2P26885 142 aaKnown RBP4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 SERPINF1P36955 418 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 CBX5P45973 191 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 OR3A4PP47883 348 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 SLC6A9P48067 706 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 CLRN1P58418 232 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 LSM6P62312 80 aaKnown RBP4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 SUPT4H1P63272 117 aaKnown RBP4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 HIST1H3AP68431 136 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 GABREP78334 506 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 ACY1Q03154 408 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 TCF15Q12870 199 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 IL15RAQ13261 267 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 LRRC37A5PQ49AS3 106 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 ANKRD39Q53RE8 183 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 BEX5Q5H9J7 111 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 PABPC1L2AQ5JQF8 200 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 HIST2H3PS2Q5TEC6 136 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 AADACL3Q5VUY0 350 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 ELP2Q6IA86 826 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 FOXL2NBQ6ZUU3 175 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 HIST2H3AQ71DI3 136 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 CPEB2Q7Z5Q1 589 aaKnown RBP4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 WFDC8Q8IUA0 241 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 CCDC36Q8IYA8 594 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 UBALD2Q8IYN6 164 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 ZNF101Q8IZC7 436 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 INO80EQ8NBZ0 244 aaPredicted RBP4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 OR10G3Q8NGC4 313 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 OR4K17Q8NGC6 315 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 OR56B1Q8NGI3 324 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 OR2AJ1Q8NGZ0 328 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 SLC25A43Q8WUT9 341 aaPredicted RBP4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 RRNAD1Q96FB5 475 aaKnown RBP4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 LRRC46Q96FV0 321 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 RTBDNQ9BSG5 229 aaPredicted RBP4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 TM2D1Q9BX74 207 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 SLC26A1Q9H2B4 701 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 CHMP1AQ9HD42 196 aaPredicted RBP4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 GPR84Q9NQS5 396 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 TAS2R3Q9NYW6 316 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 KLRF1Q9NZS2 232 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 CRIM1Q9NZV1 1036 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 MYOTQ9UBF9 498 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 ASH2LQ9UBL3 628 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 GHRLQ9UBU3 117 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 OSGIN2Q9Y236 505 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 PRELID1Q9Y255 219 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 HDGFL3Q9Y3E1 203 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 CSAG2Q9Y5P2 127 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 CEP192Q8TEP8 1941 aa4.57□□□□□ -1.68
ATPAF1-212ENST00000542495 KMT2EQ8IZD2 1858 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 LOC100509620A0A075B734 347 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 TMEM218A2RU14 115 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 FAM74A7A6NL05 159 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 FAM25EA8MYX2 175 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 EEF1E1-BLOC1S5C9J1V9 151 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 E9PLN8 166 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 ATP6V1G2-DDX39BF2Z307 99 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 F5H0A9 414 aaPredicted RBP4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 SMAD9O15198 467 aaKnown RBP4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 RER1O15258 196 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 BCAT2O15382 392 aaPredicted RBP4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 NDUFA2O43678 99 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 RAMP1O60894 148 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 MPIG6BO95866 241 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 QDPRP09417 244 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 JMJD7P0C870 316 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 FAM157CP0CG43 387 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 TPT1P13693 172 aaKnown RBP4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 PGAM2P15259 253 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 CDAP32320 146 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 EIF1P41567 113 aaKnown RBP4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 ZNF84P51523 738 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 AFF3P51826 1226 aaKnown RBP4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 GRB2P62993 217 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms