RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 DUX4L4P0CJ87 422 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 DUX4L5P0CJ88 424 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 DUX4L6P0CJ89 424 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 DUX4L7P0CJ90 424 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 ZNF708P17019 499 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 PRSS3P35030 304 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 POU3F4P49335 361 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 SGCAQ16586 387 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 BEX5Q5H9J7 111 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 TEX30Q5JUR7 227 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 CLVS2Q5SYC1 327 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 C12orf45Q8N5I9 185 aaPredicted RBP13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 ZNF75AQ96N20 296 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 SCNM1Q9BWG6 230 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 ASH2LQ9UBL3 628 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 DUX4Q9UBX2 424 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 APC2O95996 2303 aa13.42□□□□□ -0.26
CLPTM1-202ENST00000541297 OR4C45A6NMZ5 311 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 LINC01387J3KSC0 135 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 LUMP51884 338 aaPredicted RBP13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 IGSF11Q5DX21 431 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 ABLIM2Q6H8Q1 611 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 RNF128Q8TEB7 428 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 TMEM54Q969K7 222 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 SLAMF6Q96DU3 332 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 DCBLD2Q96PD2 775 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 ATPIF1Q9UII2 106 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 PURGQ9UJV8 347 aaKnown RBP13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 EMC9Q9Y3B6 208 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 RTTNQ86VV8 2226 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 ANKRD11Q6UB99 2663 aaPredicted RBP13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 TRBV5-7A0A0A0MS05 114 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 TMEM17Q86X19 198 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 LRRC18Q8N456 261 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 TMEM185AQ8NFB2 350 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 STEAP2Q8NFT2 490 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 C4orf45Q96LM5 186 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 UQCC2Q9BRT2 126 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 ULBP2Q9BZM5 246 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 COMMD4Q9H0A8 199 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 C1orf198Q9H425 327 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 GDF2Q9UK05 429 aaPredicted RBP13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 SPTBN4Q9H254 2564 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 ACACAQ13085 2346 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 A0A0D9SG52 128 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 OR5H14A6NHG9 310 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 ITGA5P08648 1049 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 H2BFMP0C1H6 154 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 C2orf76Q3KRA6 126 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 AAED1Q7RTV5 226 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 GABRG1Q8N1C3 465 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 OR5T2Q8NGG2 359 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 OR10S1Q8NGN2 331 aa13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 ALKBH3Q96Q83 286 aaPredicted RBP13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 FOXD3Q9UJU5 478 aaPredicted RBP13.41□□□□□ -0.26
CLPTM1-202ENST00000541297 RER1O15258 196 aa13.4□□□□□ -0.26
CLPTM1-202ENST00000541297 CYTIPO60759 359 aa13.4□□□□□ -0.26
CLPTM1-202ENST00000541297 FGL1Q08830 312 aa13.4□□□□□ -0.26
CLPTM1-202ENST00000541297 LRRC37A5PQ49AS3 106 aa13.4□□□□□ -0.26
CLPTM1-202ENST00000541297 OR2AJ1Q8NGZ0 328 aa13.4□□□□□ -0.26
CLPTM1-202ENST00000541297 FNDC9Q8TBE3 224 aa13.4□□□□□ -0.26
CLPTM1-202ENST00000541297 GAL3ST1Q99999 423 aa13.4□□□□□ -0.26
CLPTM1-202ENST00000541297 ALX4Q9H161 411 aaPredicted RBP13.4□□□□□ -0.26
CLPTM1-202ENST00000541297 KLF2Q9Y5W3 355 aaPredicted RBP13.4□□□□□ -0.26
CLPTM1-202ENST00000541297 KANTRA0A1W2PQU2 76 aa13.4□□□□□ -0.27
CLPTM1-202ENST00000541297 TMEM82A0PJX8 343 aa13.4□□□□□ -0.27
CLPTM1-202ENST00000541297 TMEM212A6NML5 194 aa13.4□□□□□ -0.27
CLPTM1-202ENST00000541297 M0QYG6 137 aa13.4□□□□□ -0.27
CLPTM1-202ENST00000541297 ZNHIT1O43257 154 aa13.4□□□□□ -0.27
CLPTM1-202ENST00000541297 IGHV3-9P01782 118 aa13.4□□□□□ -0.27
CLPTM1-202ENST00000541297 AGTR1P30556 359 aa13.4□□□□□ -0.27
CLPTM1-202ENST00000541297 IGFL2Q6UWQ7 119 aa13.4□□□□□ -0.27
CLPTM1-202ENST00000541297 GPR148Q8TDV2 347 aa13.4□□□□□ -0.27
CLPTM1-202ENST00000541297 RNF133Q8WVZ7 376 aa13.4□□□□□ -0.27
CLPTM1-202ENST00000541297 ATG5Q9H1Y0 275 aa13.4□□□□□ -0.27
CLPTM1-202ENST00000541297 DHHO43323 396 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 NR2C1P13056 603 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 RPL35P42766 123 aaKnown RBP13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 GUCA1AP43080 201 aaPredicted RBP13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 SCAND1P57086 179 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 ATXN7L3Q14CW9 347 aaPredicted RBP13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 TAF13Q15543 124 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 TMEM88Q6PEY1 159 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 OR2W3Q7Z3T1 314 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 C20orf196Q8IYI0 205 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 KCNRGQ8N5I3 272 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 OR1J2Q8NGS2 313 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 CCDC107Q8WV48 283 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 ASB13Q8WXK3 278 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 FAM3DQ96BQ1 224 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 SEC22AQ96IW7 307 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 VRK1Q99986 396 aaPredicted RBP13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 ZNF471Q9BX82 626 aaPredicted RBP13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 TINAGL1Q9GZM7 467 aaPredicted RBP13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 CRLF2Q9HC73 371 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 ACKR4Q9NPB9 350 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 BSNQ9UPA5 3926 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 TRGV5A0A0B4J1U4 118 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 TMEM269A0A1B0GVZ9 245 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms