RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 SPERTQ8NA61 448 aa11.05□□□□□ -0.64
PABPC1-205ENST00000518196 OR2Z1Q8NG97 314 aa11.05□□□□□ -0.64
PABPC1-205ENST00000518196 OR10AC1Q8NH08 325 aa11.05□□□□□ -0.64
PABPC1-205ENST00000518196 OR8S1Q8NH09 359 aa11.05□□□□□ -0.64
PABPC1-205ENST00000518196 GTF3AQ92664 365 aaKnown RBP11.05□□□□□ -0.64
PABPC1-205ENST00000518196 ELMOD3Q96FG2 381 aa11.05□□□□□ -0.64
PABPC1-205ENST00000518196 PGLYRP3Q96LB9 341 aa11.05□□□□□ -0.64
PABPC1-205ENST00000518196 OPALINQ96PE5 141 aa11.05□□□□□ -0.64
PABPC1-205ENST00000518196 HIST1H2AAQ96QV6 131 aa11.05□□□□□ -0.64
PABPC1-205ENST00000518196 ADAT1Q9BUB4 502 aaKnown RBP11.05□□□□□ -0.64
PABPC1-205ENST00000518196 EGLN1Q9GZT9 426 aa11.05□□□□□ -0.64
PABPC1-205ENST00000518196 TPK1Q9H3S4 243 aa11.05□□□□□ -0.64
PABPC1-205ENST00000518196 ZNF275Q9NSD4 429 aaPredicted RBP11.05□□□□□ -0.64
PABPC1-205ENST00000518196 DECR2Q9NUI1 292 aa11.05□□□□□ -0.64
PABPC1-205ENST00000518196 BEX4Q9NWD9 120 aaPredicted RBP11.05□□□□□ -0.64
PABPC1-205ENST00000518196 NKIRAS2Q9NYR9 191 aa11.05□□□□□ -0.64
PABPC1-205ENST00000518196 ZNF850A8MQ14 1090 aa11.04□□□□□ -0.64
PABPC1-205ENST00000518196 NRASP01111 189 aa11.04□□□□□ -0.64
PABPC1-205ENST00000518196 IGHV1-46P01743 117 aa11.04□□□□□ -0.64
PABPC1-205ENST00000518196 CD2P06729 351 aa11.04□□□□□ -0.64
PABPC1-205ENST00000518196 OCM2P0CE71 109 aa11.04□□□□□ -0.64
PABPC1-205ENST00000518196 SRP9P49458 86 aaKnown RBP11.04□□□□□ -0.64
PABPC1-205ENST00000518196 TNFAIP6P98066 277 aaPredicted RBP11.04□□□□□ -0.64
PABPC1-205ENST00000518196 PRDX4Q13162 271 aa11.04□□□□□ -0.64
PABPC1-205ENST00000518196 DOC2BQ14184 412 aa11.04□□□□□ -0.64
PABPC1-205ENST00000518196 TSTQ16762 297 aaKnown RBP11.04□□□□□ -0.64
PABPC1-205ENST00000518196 FAM209AQ5JX71 171 aa11.04□□□□□ -0.64
PABPC1-205ENST00000518196 MOB3CQ70IA8 216 aa11.04□□□□□ -0.64
PABPC1-205ENST00000518196 KRT74Q7RTS7 529 aa11.04□□□□□ -0.64
PABPC1-205ENST00000518196 CDH24Q86UP0 819 aa11.04□□□□□ -0.64
PABPC1-205ENST00000518196 ZDHHC23Q8IYP9 409 aa11.04□□□□□ -0.64
PABPC1-205ENST00000518196 ZCCHC24Q8N2G6 241 aaKnown RBP11.04□□□□□ -0.64
PABPC1-205ENST00000518196 OR51A4Q8NGJ6 313 aa11.04□□□□□ -0.64
PABPC1-205ENST00000518196 PP6455Q8WZ26 134 aa11.04□□□□□ -0.64
PABPC1-205ENST00000518196 THRSPQ92748 146 aa11.04□□□□□ -0.64
PABPC1-205ENST00000518196 FGGYQ96C11 551 aa11.04□□□□□ -0.64
PABPC1-205ENST00000518196 MICU1Q9BPX6 476 aa11.04□□□□□ -0.64
PABPC1-205ENST00000518196 C14orf119Q9NWQ9 140 aa11.04□□□□□ -0.64
PABPC1-205ENST00000518196 HECTD1Q9ULT8 2610 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 TRBV5-5A0A0J9YX44 114 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 A0A1B0GWJ7 208 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 A6NIN4 97 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 TRIM64CA6NLI5 447 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 H0YL77 283 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 CCRL2O00421 344 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 MLNRO43193 412 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 GATBO75879 557 aaKnown RBP11.03□□□□□ -0.64
PABPC1-205ENST00000518196 INMTO95050 263 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 HLA-DPB1P04440 258 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 CD55P08174 381 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 PAX1P15863 534 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 HOXB4P17483 251 aaPredicted RBP11.03□□□□□ -0.64
PABPC1-205ENST00000518196 TNFRSF1AP19438 455 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 PSMA1P25786 263 aaKnown RBP11.03□□□□□ -0.64
PABPC1-205ENST00000518196 MAPK3P27361 379 aaPredicted RBP11.03□□□□□ -0.64
PABPC1-205ENST00000518196 SOX2P48431 317 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 EFNA4P52798 201 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 CCL8P80075 99 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 TESK1Q15569 626 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 DEFB113Q30KQ7 82 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 Q499Y3 187 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 PLCXD3Q63HM9 321 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 SERPINA12Q8IW75 414 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 PHC2Q8IXK0 858 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 OR10AD1Q8NGE0 317 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 RGP1Q92546 391 aaPredicted RBP11.03□□□□□ -0.64
PABPC1-205ENST00000518196 MBD6Q96DN6 1003 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 ADAT3Q96EY9 351 aaPredicted RBP11.03□□□□□ -0.64
PABPC1-205ENST00000518196 TECTBQ96PL2 329 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 SORCS2Q96PQ0 1159 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 TMED9Q9BVK6 235 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 MRPS26Q9BYN8 205 aaKnown RBP11.03□□□□□ -0.64
PABPC1-205ENST00000518196 CXXC4Q9H2H0 198 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 BARX1Q9HBU1 254 aaPredicted RBP11.03□□□□□ -0.64
PABPC1-205ENST00000518196 GPR173Q9NS66 373 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 ZNF701Q9NV72 531 aaPredicted RBP11.03□□□□□ -0.64
PABPC1-205ENST00000518196 IL19Q9UHD0 177 aa11.03□□□□□ -0.64
PABPC1-205ENST00000518196 CHD3Q12873 2000 aaKnown RBP11.02□□□□□ -0.64
PABPC1-205ENST00000518196 ANKRD61A6NGH8 418 aa11.02□□□□□ -0.65
PABPC1-205ENST00000518196 ZNF879B4DU55 563 aa11.02□□□□□ -0.65
PABPC1-205ENST00000518196 F5H5P2 479 aa11.02□□□□□ -0.65
PABPC1-205ENST00000518196 LMX1BO60663 402 aa11.02□□□□□ -0.65
PABPC1-205ENST00000518196 OCMP0CE72 109 aaPredicted RBP11.02□□□□□ -0.65
PABPC1-205ENST00000518196 CD200P41217 278 aa11.02□□□□□ -0.65
PABPC1-205ENST00000518196 MAGEB1P43366 347 aa11.02□□□□□ -0.65
PABPC1-205ENST00000518196 PTH2RP49190 550 aa11.02□□□□□ -0.65
PABPC1-205ENST00000518196 ATP5J2P56134 94 aa11.02□□□□□ -0.65
PABPC1-205ENST00000518196 RPS11P62280 158 aaKnown RBP eCLIP11.02□□□□□ -0.65
PABPC1-205ENST00000518196 CNN3Q15417 329 aaKnown RBP11.02□□□□□ -0.65
PABPC1-205ENST00000518196 CEACAM21Q3KPI0 293 aa11.02□□□□□ -0.65
PABPC1-205ENST00000518196 SYT6Q5T7P8 510 aaPredicted RBP11.02□□□□□ -0.65
PABPC1-205ENST00000518196 TMEM42Q69YG0 159 aa11.02□□□□□ -0.65
PABPC1-205ENST00000518196 UTS2BQ765I0 119 aa11.02□□□□□ -0.65
PABPC1-205ENST00000518196 CELF2-AS1Q8N7Q2 184 aa11.02□□□□□ -0.65
PABPC1-205ENST00000518196 OR5A2Q8NGI9 324 aa11.02□□□□□ -0.65
PABPC1-205ENST00000518196 OR5D14Q8NGL3 314 aa11.02□□□□□ -0.65
PABPC1-205ENST00000518196 OR13C5Q8NGS8 318 aa11.02□□□□□ -0.65
PABPC1-205ENST00000518196 ITLN1Q8WWA0 313 aa11.02□□□□□ -0.65
PABPC1-205ENST00000518196 MUL1Q969V5 352 aa11.02□□□□□ -0.65
PABPC1-205ENST00000518196 TMEM106AQ96A25 262 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms