RNA–Protein interactions for RNA: ENST00000516543.1

SNORA40.14-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.14-201ENST00000516543 FAM206AQ9NX38 181 aa0□□□□□ -2.41
SNORA40.14-201ENST00000516543 TMEM72A0PK05 275 aa-0.01□□□□□ -2.41
SNORA40.14-201ENST00000516543 SMCO2A6NFE2 343 aa-0.01□□□□□ -2.41
SNORA40.14-201ENST00000516543 PCP4L1A6NKN8 68 aa-0.01□□□□□ -2.41
SNORA40.14-201ENST00000516543 H3BRN7 92 aa-0.01□□□□□ -2.41
SNORA40.14-201ENST00000516543 SCAMP2O15127 329 aaKnown RBP-0.01□□□□□ -2.41
SNORA40.14-201ENST00000516543 MYCNOSP40205 109 aa-0.01□□□□□ -2.41
SNORA40.14-201ENST00000516543 ERFP50548 548 aa-0.01□□□□□ -2.41
SNORA40.14-201ENST00000516543 AIF1P55008 147 aa-0.01□□□□□ -2.41
SNORA40.14-201ENST00000516543 ZNF121P58317 390 aaPredicted RBP-0.01□□□□□ -2.41
SNORA40.14-201ENST00000516543 POLR2FP61218 127 aaKnown RBP-0.01□□□□□ -2.41
SNORA40.14-201ENST00000516543 PSMD5Q16401 504 aa-0.01□□□□□ -2.41
SNORA40.14-201ENST00000516543 CTSL3PQ5NE16 218 aa-0.01□□□□□ -2.41
SNORA40.14-201ENST00000516543 TPTE2P1Q5T6R2 138 aa-0.01□□□□□ -2.41
SNORA40.14-201ENST00000516543 HHATQ5VTY9 493 aa-0.01□□□□□ -2.41
SNORA40.14-201ENST00000516543 PMF1Q6P1K2 205 aa-0.01□□□□□ -2.41
SNORA40.14-201ENST00000516543 CYHR1Q6ZMK1 362 aa-0.01□□□□□ -2.41
SNORA40.14-201ENST00000516543 BPIFCQ8NFQ6 507 aa-0.01□□□□□ -2.41
SNORA40.14-201ENST00000516543 STARD10Q9Y365 291 aa-0.01□□□□□ -2.41
SNORA40.14-201ENST00000516543 ELP1O95163 1332 aa-0.02□□□□□ -2.41
SNORA40.14-201ENST00000516543 SIGLEC16A6NMB1 481 aa-0.02□□□□□ -2.41
SNORA40.14-201ENST00000516543 LEUTXA8MZ59 168 aa-0.02□□□□□ -2.41
SNORA40.14-201ENST00000516543 CST1P01037 141 aa-0.02□□□□□ -2.41
SNORA40.14-201ENST00000516543 IL1BP01584 269 aa-0.02□□□□□ -2.41
SNORA40.14-201ENST00000516543 MCF2P10911 925 aa-0.02□□□□□ -2.41
SNORA40.14-201ENST00000516543 GZMAP12544 262 aa-0.02□□□□□ -2.41
SNORA40.14-201ENST00000516543 OR1E1P30953 314 aa-0.02□□□□□ -2.41
SNORA40.14-201ENST00000516543 GNRHRP30968 328 aa-0.02□□□□□ -2.41
SNORA40.14-201ENST00000516543 TUFMP49411 452 aaKnown RBP-0.02□□□□□ -2.41
SNORA40.14-201ENST00000516543 UBE2HP62256 183 aa-0.02□□□□□ -2.41
SNORA40.14-201ENST00000516543 BST2Q10589 180 aaKnown RBP-0.02□□□□□ -2.41
SNORA40.14-201ENST00000516543 CERS6Q6ZMG9 384 aa-0.02□□□□□ -2.41
SNORA40.14-201ENST00000516543 Q6ZQT7 251 aa-0.02□□□□□ -2.41
SNORA40.14-201ENST00000516543 KRTAP19-3Q7Z4W3 81 aa-0.02□□□□□ -2.41
SNORA40.14-201ENST00000516543 RPRMLQ8N4K4 120 aa-0.02□□□□□ -2.41
SNORA40.14-201ENST00000516543 OR10W1Q8NGF6 305 aa-0.02□□□□□ -2.41
SNORA40.14-201ENST00000516543 OR2V1Q8NHB1 315 aa-0.02□□□□□ -2.41
SNORA40.14-201ENST00000516543 ISG20Q96AZ6 181 aaKnown RBP-0.02□□□□□ -2.41
SNORA40.14-201ENST00000516543 TUBGCP3Q96CW5 907 aa-0.02□□□□□ -2.41
SNORA40.14-201ENST00000516543 VCX2Q9H322 139 aa-0.02□□□□□ -2.41
SNORA40.14-201ENST00000516543 CCDC59Q9P031 241 aaKnown RBP-0.02□□□□□ -2.41
SNORA40.14-201ENST00000516543 TRAPPC1Q9Y5R8 145 aa-0.02□□□□□ -2.41
SNORA40.14-201ENST00000516543 CACNA1SQ13698 1873 aa-0.02□□□□□ -2.41
SNORA40.14-201ENST00000516543 CRB1P82279 1406 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 USP47Q96K76 1375 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 SETD1AO15047 1707 aaKnown RBP-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 IGKV1D-37A0A075B6S9 117 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 C15orf38-AP3S2A0A0A6YYH1 394 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 A6NDN8 102 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 ZNF189O75820 626 aaPredicted RBP-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 NAPSAO96009 420 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 IGKV1D-33P01593 117 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 IGKV1-33P01594 117 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 GZMBP10144 247 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 PFN2P35080 140 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 ST3GAL4Q11206 333 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 ENDOGQ14249 297 aaKnown RBP-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 REEP3Q6NUK4 255 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 ZNF767PQ75MW2 155 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 CMC1Q7Z7K0 106 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 SPATA4Q8NEY3 305 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 OR8K1Q8NGG5 319 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 OR8J1Q8NGP2 316 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 OR5C1Q8NGR4 320 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 FAM57AQ8TBR7 257 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 C10orf105Q8TEF2 133 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 CAPSLQ8WWF8 208 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 SFXN3Q9BWM7 321 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 TBL1XR1Q9BZK7 514 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 RDH14Q9HBH5 336 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 MRM3Q9HC36 420 aaKnown RBP-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 ZNF160Q9HCG1 818 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 TRPM6Q9BX84 2022 aa-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 NYNRINQ9P2P1 1898 aaKnown RBP-0.03□□□□□ -2.41
SNORA40.14-201ENST00000516543 KNCNA6PVL3 124 aa-0.04□□□□□ -2.42
SNORA40.14-201ENST00000516543 A8MWP4 228 aa-0.04□□□□□ -2.42
SNORA40.14-201ENST00000516543 NME4O00746 187 aa-0.04□□□□□ -2.42
SNORA40.14-201ENST00000516543 AIM2O14862 343 aa-0.04□□□□□ -2.42
SNORA40.14-201ENST00000516543 CRTAPO75718 401 aaPredicted RBP-0.04□□□□□ -2.42
SNORA40.14-201ENST00000516543 CXorf1O96002 111 aa-0.04□□□□□ -2.42
SNORA40.14-201ENST00000516543 HPRT1P00492 218 aa-0.04□□□□□ -2.42
SNORA40.14-201ENST00000516543 TEAD1P28347 426 aa-0.04□□□□□ -2.42
SNORA40.14-201ENST00000516543 PBLDP30039 288 aaPredicted RBP-0.04□□□□□ -2.42
SNORA40.14-201ENST00000516543 PPICP45877 212 aa-0.04□□□□□ -2.42
SNORA40.14-201ENST00000516543 CEBPDP49716 269 aaPredicted RBP-0.04□□□□□ -2.42
SNORA40.14-201ENST00000516543 RPS15AP62244 130 aaKnown RBP-0.04□□□□□ -2.42
SNORA40.14-201ENST00000516543 CST6Q15828 149 aa-0.04□□□□□ -2.42
SNORA40.14-201ENST00000516543 ATAD3BQ5T9A4 648 aa-0.04□□□□□ -2.42
SNORA40.14-201ENST00000516543 TRMT10CQ7L0Y3 403 aaKnown RBP-0.04□□□□□ -2.42
SNORA40.14-201ENST00000516543 ITPRIPQ8IWB1 547 aa-0.04□□□□□ -2.42
SNORA40.14-201ENST00000516543 HS3ST5Q8IZT8 346 aa-0.04□□□□□ -2.42
SNORA40.14-201ENST00000516543 IQCKQ8N0W5 287 aa-0.04□□□□□ -2.42
SNORA40.14-201ENST00000516543 RNF10Q8N5U6 811 aaKnown RBP-0.04□□□□□ -2.42
SNORA40.14-201ENST00000516543 BPIFB6Q8NFQ5 453 aa-0.04□□□□□ -2.42
SNORA40.14-201ENST00000516543 OR2M7Q8NG81 312 aa-0.04□□□□□ -2.42
SNORA40.14-201ENST00000516543 APOBEC3DQ96AK3 386 aaPredicted RBP-0.04□□□□□ -2.42
SNORA40.14-201ENST00000516543 SGTBQ96EQ0 304 aa-0.04□□□□□ -2.42
SNORA40.14-201ENST00000516543 DYNLL2Q96FJ2 89 aa-0.04□□□□□ -2.42
SNORA40.14-201ENST00000516543 C16orf45Q96MC5 204 aaPredicted RBP-0.04□□□□□ -2.42
SNORA40.14-201ENST00000516543 ALS2CR12Q96Q35 445 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms