RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 MRPL22Q9NWU5 206 aaKnown RBP11.53□□□□□ -0.56
CCNL1-216ENST00000475298 OR5AC2Q9NZP5 309 aa11.53□□□□□ -0.56
CCNL1-216ENST00000475298 B9D1Q9UPM9 204 aa11.53□□□□□ -0.56
CCNL1-216ENST00000475298 COL5A1P20908 1838 aaPredicted RBP11.53□□□□□ -0.56
CCNL1-216ENST00000475298 MARCH11A6NNE9 402 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 ZNF354AO60765 605 aaPredicted RBP11.52□□□□□ -0.57
CCNL1-216ENST00000475298 MPZL1O95297 269 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 PNPP00491 289 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 SPARCP09486 303 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 HLA-DOBP13765 273 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 CTLA4P16410 223 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 G0S2P27469 103 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 CRABP1P29762 137 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 ZNF84P51523 738 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 CD81P60033 236 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 NHLH2Q02577 135 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 PDZD11Q5EBL8 140 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 RPL7L1Q6DKI1 246 aaKnown RBP11.52□□□□□ -0.57
CCNL1-216ENST00000475298 Q6ZRG5 221 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 D2HGDHQ8N465 521 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 ADAD2Q8NCV1 583 aaKnown RBP11.52□□□□□ -0.57
CCNL1-216ENST00000475298 OR1J1Q8NGS3 322 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 MAFIPQ8WZ33 124 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 NTNG2Q96CW9 530 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 POM121Q96HA1 1249 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 C4orf45Q96LM5 186 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 COMMD4Q9H0A8 199 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 ASCC3Q8N3C0 2202 aaKnown RBP11.52□□□□□ -0.57
CCNL1-216ENST00000475298 TRBV5-7A0A0A0MS05 114 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 PRSS37A4D1T9 235 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 ZNF724A8MTY0 619 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 ZNF736B4DX44 427 aaPredicted RBP11.52□□□□□ -0.57
CCNL1-216ENST00000475298 DUX1O43812 170 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 HIST1H2BKO60814 126 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 HIST1H2BJP06899 126 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 LYL1P12980 280 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 HIST1H2BOP23527 126 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 CCKBRP32239 447 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 HIST1H2BBP33778 126 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 HIST1H2BDP58876 126 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 RPL27P61353 136 aaKnown RBP11.52□□□□□ -0.57
CCNL1-216ENST00000475298 DCAF7P61962 342 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 HIST1H2BCP62807 126 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 EGR3Q06889 387 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 HIST2H2BEQ16778 126 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.52□□□□□ -0.57
CCNL1-216ENST00000475298 C1orf140Q5VVS0 124 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 ZNF385CQ66K41 422 aaPredicted RBP11.52□□□□□ -0.57
CCNL1-216ENST00000475298 C5orf24Q7Z6I8 188 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 PLXDC1Q8IUK5 500 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 WDFY1Q8IWB7 410 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 ZNF417Q8TAU3 575 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 ST7LQ8TDW4 575 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 TSEN15Q8WW01 171 aaKnown RBP11.52□□□□□ -0.57
CCNL1-216ENST00000475298 HIST1H2BHQ93079 126 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 AQP10Q96PS8 301 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 ZNF587Q96SQ5 575 aaPredicted RBP11.52□□□□□ -0.57
CCNL1-216ENST00000475298 HIST1H2BNQ99877 126 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 HIST1H2BMQ99879 126 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 FGF21Q9NSA1 209 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 AMDHD2Q9Y303 409 aa11.52□□□□□ -0.57
CCNL1-216ENST00000475298 CPAMD8Q8IZJ3 1885 aa11.51□□□□□ -0.57
CCNL1-216ENST00000475298 DMDP11532 3685 aa11.51□□□□□ -0.57
CCNL1-216ENST00000475298 A0A1B0GX78 115 aa11.51□□□□□ -0.57
CCNL1-216ENST00000475298 TMEM212A6NML5 194 aa11.51□□□□□ -0.57
CCNL1-216ENST00000475298 EREGO14944 169 aa11.51□□□□□ -0.57
CCNL1-216ENST00000475298 CFPP27918 469 aa11.51□□□□□ -0.57
CCNL1-216ENST00000475298 MFGE8Q08431 387 aaPredicted RBP11.51□□□□□ -0.57
CCNL1-216ENST00000475298 SGCBQ16585 318 aa11.51□□□□□ -0.57
CCNL1-216ENST00000475298 CD163Q86VB7 1156 aa11.51□□□□□ -0.57
CCNL1-216ENST00000475298 CADM4Q8NFZ8 388 aa11.51□□□□□ -0.57
CCNL1-216ENST00000475298 OR4S1Q8NGB4 309 aa11.51□□□□□ -0.57
CCNL1-216ENST00000475298 OR10AD1Q8NGE0 317 aa11.51□□□□□ -0.57
CCNL1-216ENST00000475298 ZNF519Q8TB69 540 aa11.51□□□□□ -0.57
CCNL1-216ENST00000475298 GPR119Q8TDV5 335 aa11.51□□□□□ -0.57
CCNL1-216ENST00000475298 OIT3Q8WWZ8 545 aa11.51□□□□□ -0.57
CCNL1-216ENST00000475298 DCBLD2Q96PD2 775 aa11.51□□□□□ -0.57
CCNL1-216ENST00000475298 S100A13Q99584 98 aa11.51□□□□□ -0.57
CCNL1-216ENST00000475298 TAF9BQ9HBM6 251 aa11.51□□□□□ -0.57
CCNL1-216ENST00000475298 KLK13Q9UKR3 277 aa11.51□□□□□ -0.57
CCNL1-216ENST00000475298 A0A1W2PQD3 144 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 DLL1O00548 723 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 ADAM10O14672 748 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 EFSO43281 561 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 NPIPB7O75200 414 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 OR2C1O95371 312 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 VAMP1P23763 118 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 SNCAP37840 140 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 POLR2HP52434 150 aaKnown RBP11.5□□□□□ -0.57
CCNL1-216ENST00000475298 RAP1AP62834 184 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 SMAD4Q13485 552 aaKnown RBP11.5□□□□□ -0.57
CCNL1-216ENST00000475298 ASPHD2Q6ICH7 369 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 ZNF441Q8N8Z8 693 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 FAM3DQ96BQ1 224 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 ZNF501Q96CX3 271 aaPredicted RBP11.5□□□□□ -0.57
CCNL1-216ENST00000475298 MUCL1Q96DR8 90 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 OR8B4Q96RC9 309 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 BCO1Q9HAY6 547 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 SLC2A8Q9NY64 477 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 CDV3Q9UKY7 258 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms