RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 KIR2DS3Q14952 304 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 HIST2H2BEQ16778 126 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.18□□□□□ -0.46
NPHP4-207ENST00000470763 OPN5Q6U736 354 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 SLC22A24Q8N4F4 322 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 C19orf47Q8N9M1 422 aaKnown RBP12.18□□□□□ -0.46
NPHP4-207ENST00000470763 ZNF610Q8N9Z0 462 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 Q8WTZ3 238 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 PATE1Q8WXA2 126 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 HIST1H2BHQ93079 126 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 MISP3Q96FF7 219 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 TCTN2Q96GX1 697 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 HIST1H2BNQ99877 126 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 HIST1H2BMQ99879 126 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 CCDC3Q9BQI4 270 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 LPAR5Q9H1C0 372 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 IGFLR1Q9H665 355 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 MYO15AQ9UKN7 3530 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 PRSS38A1L453 326 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 TERTO14746 1132 aaKnown RBP12.18□□□□□ -0.46
NPHP4-207ENST00000470763 NUDT14O95848 222 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 BPNT1O95861 308 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 FABP4P15090 132 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 RPL27P61353 136 aaKnown RBP12.18□□□□□ -0.46
NPHP4-207ENST00000470763 SLC35A1P78382 337 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 PCK2Q16822 640 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 OR14C36Q8NHC7 312 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 CA5BP1Q8WTZ4 195 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 TSACCQ96A04 125 aaPredicted RBP12.18□□□□□ -0.46
NPHP4-207ENST00000470763 MUCL1Q96DR8 90 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 OR2M4Q96R27 311 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 RTN4RQ9BZR6 473 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 OR10A5Q9H207 317 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 EHFQ9NZC4 300 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 DEDDO75618 318 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 KAT7O95251 611 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 CHATP28329 748 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 PTGER4P35408 488 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 GLIPR1L1Q6UWM5 242 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 MAMDC2Q7Z304 686 aaPredicted RBP12.18□□□□□ -0.46
NPHP4-207ENST00000470763 PRR22Q8IZ63 422 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 TMEM156Q8N614 296 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 SUMF2Q8NBJ7 301 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 APCDD1LQ8NCL9 501 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 ARHGAP5-AS1Q96IT6 56 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 OR11A1Q9GZK7 315 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 WFDC1Q9HC57 220 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 TGIF2-C20orf24A0A0A6YYL0 155 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 H0Y8X5 98 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 XRCC2O43543 280 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 TNFSF14O43557 240 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 KLK2P20151 261 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 CXCR1P25024 350 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 CRABP1P29762 137 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 ZNF93P35789 620 aaPredicted RBP12.17□□□□□ -0.46
NPHP4-207ENST00000470763 RAB1AP62820 205 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 VAX1Q5SQQ9 334 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 PEG10Q86TG7 708 aaKnown RBP12.17□□□□□ -0.46
NPHP4-207ENST00000470763 SFTPA2Q8IWL1 248 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 ZNF440Q8IYI8 595 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 CPNE4Q96A23 557 aaPredicted RBP12.17□□□□□ -0.46
NPHP4-207ENST00000470763 S100A13Q99584 98 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 MRPS23Q9Y3D9 190 aaKnown RBP12.17□□□□□ -0.46
NPHP4-207ENST00000470763 RFNGQ9Y644 331 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 PPP1R2P9O14990 202 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 ATXN7O15265 892 aaPredicted RBP12.17□□□□□ -0.46
NPHP4-207ENST00000470763 BGLAPP02818 100 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 RBMXP38159 391 aaKnown RBP12.17□□□□□ -0.46
NPHP4-207ENST00000470763 ASCL1P50553 236 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 TMEM50BP56557 158 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 CSNK2A1P68400 391 aaPredicted RBP12.17□□□□□ -0.46
NPHP4-207ENST00000470763 CYB5R2Q6BCY4 276 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 MYO7BQ6PIF6 2116 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.17□□□□□ -0.46
NPHP4-207ENST00000470763 CSNK2A3Q8NEV1 391 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 RNASE11Q8TAA1 199 aaKnown RBP12.17□□□□□ -0.46
NPHP4-207ENST00000470763 FNDC9Q8TBE3 224 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 FAM213BQ8TBF2 198 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 OR1E3Q8WZA6 343 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 MRPL24Q96A35 216 aaKnown RBP12.17□□□□□ -0.46
NPHP4-207ENST00000470763 UBQLN4Q9NRR5 601 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 CLEC1BQ9P126 229 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 HS3ST3B1Q9Y662 390 aa12.17□□□□□ -0.46
NPHP4-207ENST00000470763 ZNF587BE7ETH6 402 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 SCDO00767 359 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 SYT7O43581 403 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 TRGC2P03986 189 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 HIST1H1DP16402 221 aaKnown RBP12.16□□□□□ -0.46
NPHP4-207ENST00000470763 HSD11B1P28845 292 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 CASP6P55212 293 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 ERVFRD-1P60508 538 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 GLO1Q04760 184 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 TMEM182Q6ZP80 229 aaPredicted RBP12.16□□□□□ -0.46
NPHP4-207ENST00000470763 METTL27Q8N6F8 245 aaPredicted RBP12.16□□□□□ -0.46
NPHP4-207ENST00000470763 ZNF519Q8TB69 540 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 GALNT14Q96FL9 552 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 LURAP1Q96LR2 239 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 DGAT2Q96PD7 388 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 S1PR5Q9H228 398 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 TCEAL2Q9H3H9 227 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms