RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 GPR157Q5UAW9 335 aa17.15■□□□□ 0.34
SDC1-205ENST00000447124 BCDIN3DQ7Z5W3 292 aaKnown RBP17.15■□□□□ 0.34
SDC1-205ENST00000447124 KRT77Q7Z794 578 aa17.15■□□□□ 0.34
SDC1-205ENST00000447124 OR5T2Q8NGG2 359 aa17.15■□□□□ 0.34
SDC1-205ENST00000447124 HPSE2Q8WWQ2 592 aa17.15■□□□□ 0.34
SDC1-205ENST00000447124 PIGCQ92535 297 aa17.15■□□□□ 0.34
SDC1-205ENST00000447124 RPL3LQ92901 407 aaKnown RBP17.15■□□□□ 0.34
SDC1-205ENST00000447124 PPP1R14AQ96A00 147 aa17.15■□□□□ 0.34
SDC1-205ENST00000447124 SLC25A28Q96A46 364 aa17.15■□□□□ 0.34
SDC1-205ENST00000447124 YIPF3Q9GZM5 350 aa17.15■□□□□ 0.34
SDC1-205ENST00000447124 NIPAL2Q9H841 368 aa17.15■□□□□ 0.34
SDC1-205ENST00000447124 PAPOLBQ9NRJ5 636 aaKnown RBP17.15■□□□□ 0.34
SDC1-205ENST00000447124 LAMP5Q9UJQ1 280 aa17.15■□□□□ 0.34
SDC1-205ENST00000447124 COPS3Q9UNS2 423 aa17.15■□□□□ 0.34
SDC1-205ENST00000447124 SRRM5B3KS81 715 aa17.14■□□□□ 0.33
SDC1-205ENST00000447124 HOXA3O43365 443 aaPredicted RBP17.14■□□□□ 0.33
SDC1-205ENST00000447124 PRKYO43930 277 aa17.14■□□□□ 0.33
SDC1-205ENST00000447124 MRPL3P09001 348 aaKnown RBP17.14■□□□□ 0.33
SDC1-205ENST00000447124 TGM4P49221 684 aa17.14■□□□□ 0.33
SDC1-205ENST00000447124 BPIFB3P59826 476 aa17.14■□□□□ 0.33
SDC1-205ENST00000447124 EFNB1P98172 346 aa17.14■□□□□ 0.33
SDC1-205ENST00000447124 IL5RAQ01344 420 aa17.14■□□□□ 0.33
SDC1-205ENST00000447124 C16orf87Q6PH81 154 aa17.14■□□□□ 0.33
SDC1-205ENST00000447124 Q6YL49 198 aa17.14■□□□□ 0.33
SDC1-205ENST00000447124 KRT74Q7RTS7 529 aa17.14■□□□□ 0.33
SDC1-205ENST00000447124 FAM216BQ8N7L0 139 aa17.14■□□□□ 0.33
SDC1-205ENST00000447124 PNLDC1Q8NA58 520 aaKnown RBP17.14■□□□□ 0.33
SDC1-205ENST00000447124 OR5K1Q8NHB7 308 aa17.14■□□□□ 0.33
SDC1-205ENST00000447124 RNF170Q96K19 258 aa17.14■□□□□ 0.33
SDC1-205ENST00000447124 PKP2Q99959 881 aa17.14■□□□□ 0.33
SDC1-205ENST00000447124 WDR13Q9H1Z4 485 aa17.14■□□□□ 0.33
SDC1-205ENST00000447124 FAM206AQ9NX38 181 aa17.14■□□□□ 0.33
SDC1-205ENST00000447124 ANXA2P2A6NMY6 339 aa17.13■□□□□ 0.33
SDC1-205ENST00000447124 ECDO95905 644 aaPredicted RBP17.13■□□□□ 0.33
SDC1-205ENST00000447124 TFF1P04155 84 aa17.13■□□□□ 0.33
SDC1-205ENST00000447124 EPHA2P29317 976 aa17.13■□□□□ 0.33
SDC1-205ENST00000447124 ATPAF1Q5TC12 328 aaPredicted RBP17.13■□□□□ 0.33
SDC1-205ENST00000447124 DEGS2Q6QHC5 323 aa17.13■□□□□ 0.33
SDC1-205ENST00000447124 SCCPDHQ8NBX0 429 aa17.13■□□□□ 0.33
SDC1-205ENST00000447124 LY6G5BQ8NDX9 201 aa17.13■□□□□ 0.33
SDC1-205ENST00000447124 ST8SIA4Q92187 359 aa17.13■□□□□ 0.33
SDC1-205ENST00000447124 ZDHHC16Q969W1 377 aa17.13■□□□□ 0.33
SDC1-205ENST00000447124 RTL8AQ9BWD3 113 aa17.13■□□□□ 0.33
SDC1-205ENST00000447124 TEX12Q9BXU0 123 aa17.13■□□□□ 0.33
SDC1-205ENST00000447124 CNTD2Q9H8S5 307 aa17.13■□□□□ 0.33
SDC1-205ENST00000447124 RPUSD1Q9UJJ7 312 aaKnown RBP17.13■□□□□ 0.33
SDC1-205ENST00000447124 TMEM269A0A1B0GVZ9 245 aa17.12■□□□□ 0.33
SDC1-205ENST00000447124 M0R129 80 aa17.12■□□□□ 0.33
SDC1-205ENST00000447124 SELLP14151 372 aa17.12■□□□□ 0.33
SDC1-205ENST00000447124 DCTDP32321 178 aa17.12■□□□□ 0.33
SDC1-205ENST00000447124 GMFBP60983 142 aa17.12■□□□□ 0.33
SDC1-205ENST00000447124 SNCBQ16143 134 aa17.12■□□□□ 0.33
SDC1-205ENST00000447124 C11orf91Q3C1V1 193 aa17.12■□□□□ 0.33
SDC1-205ENST00000447124 DMRTC1Q5HYR2 192 aa17.12■□□□□ 0.33
SDC1-205ENST00000447124 OR10Z1Q8NGY1 313 aa17.12■□□□□ 0.33
SDC1-205ENST00000447124 SGMS2Q8NHU3 365 aa17.12■□□□□ 0.33
SDC1-205ENST00000447124 DNAJC9Q8WXX5 260 aa17.12■□□□□ 0.33
SDC1-205ENST00000447124 LHX4Q969G2 390 aa17.12■□□□□ 0.33
SDC1-205ENST00000447124 RAB3IPQ96QF0 476 aaPredicted RBP17.12■□□□□ 0.33
SDC1-205ENST00000447124 OR8B4Q96RC9 309 aa17.12■□□□□ 0.33
SDC1-205ENST00000447124 SNTG1Q9NSN8 517 aa17.12■□□□□ 0.33
SDC1-205ENST00000447124 HAO2Q9NYQ3 351 aa17.12■□□□□ 0.33
SDC1-205ENST00000447124 ACOD1A6NK06 481 aa17.11■□□□□ 0.33
SDC1-205ENST00000447124 TMEM210A6NLX4 147 aa17.11■□□□□ 0.33
SDC1-205ENST00000447124 AKR7A2O43488 359 aa17.11■□□□□ 0.33
SDC1-205ENST00000447124 IGLV3-1P01715 115 aa17.11■□□□□ 0.33
SDC1-205ENST00000447124 ESRRGP62508 458 aa17.11■□□□□ 0.33
SDC1-205ENST00000447124 ROM1Q03395 351 aa17.11■□□□□ 0.33
SDC1-205ENST00000447124 AADACL4Q5VUY2 407 aa17.11■□□□□ 0.33
SDC1-205ENST00000447124 METTL11BQ5VVY1 283 aa17.11■□□□□ 0.33
SDC1-205ENST00000447124 STUMQ69YW2 141 aa17.11■□□□□ 0.33
SDC1-205ENST00000447124 FTMTQ8N4E7 242 aa17.11■□□□□ 0.33
SDC1-205ENST00000447124 C12orf43Q96C57 262 aaKnown RBP17.11■□□□□ 0.33
SDC1-205ENST00000447124 TTTY10Q9BZA0 68 aa17.11■□□□□ 0.33
SDC1-205ENST00000447124 PBOV1Q9GZY1 135 aa17.11■□□□□ 0.33
SDC1-205ENST00000447124 UNKLQ9H9P5 680 aaKnown RBP17.11■□□□□ 0.33
SDC1-205ENST00000447124 NOX4Q9NPH5 578 aa17.11■□□□□ 0.33
SDC1-205ENST00000447124 TNFRSF19Q9NS68 423 aa17.11■□□□□ 0.33
SDC1-205ENST00000447124 KIF17Q9P2E2 1029 aa17.11■□□□□ 0.33
SDC1-205ENST00000447124 ZNF391Q9UJN7 358 aa17.11■□□□□ 0.33
SDC1-205ENST00000447124 IGHV1-69DA0A0B4J2H0 117 aa17.1■□□□□ 0.33
SDC1-205ENST00000447124 A0A0U1RQV5 110 aa17.1■□□□□ 0.33
SDC1-205ENST00000447124 MAGEB4O15481 346 aaPredicted RBP17.1■□□□□ 0.33
SDC1-205ENST00000447124 SPRY1O43609 319 aaPredicted RBP17.1■□□□□ 0.33
SDC1-205ENST00000447124 RHBDL1O75783 438 aa17.1■□□□□ 0.33
SDC1-205ENST00000447124 IGHV1-69P01742 117 aa17.1■□□□□ 0.33
SDC1-205ENST00000447124 MELTFP08582 738 aa17.1■□□□□ 0.33
SDC1-205ENST00000447124 MAP2K3P46734 347 aa17.1■□□□□ 0.33
SDC1-205ENST00000447124 IKZF1Q13422 519 aa17.1■□□□□ 0.33
SDC1-205ENST00000447124 PDCD1Q15116 288 aa17.1■□□□□ 0.33
SDC1-205ENST00000447124 ATP6AP1Q15904 470 aa17.1■□□□□ 0.33
SDC1-205ENST00000447124 KCTD18Q6PI47 426 aaPredicted RBP17.1■□□□□ 0.33
SDC1-205ENST00000447124 KCTD8Q6ZWB6 473 aa17.1■□□□□ 0.33
SDC1-205ENST00000447124 MEPCEQ7L2J0 689 aaKnown RBP17.1■□□□□ 0.33
SDC1-205ENST00000447124 SLC36A1Q7Z2H8 476 aa17.1■□□□□ 0.33
SDC1-205ENST00000447124 ZDHHC23Q8IYP9 409 aa17.1■□□□□ 0.33
SDC1-205ENST00000447124 ZNF679Q8IYX0 411 aa17.1■□□□□ 0.33
SDC1-205ENST00000447124 TCEANCQ8N8B7 351 aa17.1■□□□□ 0.33
SDC1-205ENST00000447124 MROQ9BYG7 248 aa17.1■□□□□ 0.33
SDC1-205ENST00000447124 OR51I2Q9H344 312 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms