RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 MMP26Q9NRE1 261 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 PIN1P1O15428 100 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 CST4P01036 141 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 CD46P15529 392 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 ARG2P78540 354 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 MRPS34P82930 218 aaKnown RBP14.83□□□□□ -0.04
TCOF1-206ENST00000445265 RAB31Q13636 194 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 RHBDD2Q6NTF9 364 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 PRSS54Q6PEW0 395 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 RBMS3Q6XE24 437 aaKnown RBP14.83□□□□□ -0.04
TCOF1-206ENST00000445265 C16orf47Q6ZP98 133 aaPredicted RBP14.83□□□□□ -0.04
TCOF1-206ENST00000445265 SFTPA2Q8IWL1 248 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 AICDAQ9GZX7 198 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 ZFP64Q9NPA5 681 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 DNAJB11Q9UBS4 358 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 ST3GAL6Q9Y274 331 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 TRIM77I1YAP6 450 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 CXCL13O43927 109 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 HPNP05981 417 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 AADACP22760 399 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 DMRTC1Q5HYR2 192 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 PRRX2Q99811 253 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 CACNA1IQ9P0X4 2223 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 IGHV3-15A0A0B4J1V0 119 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 ADRA2AP08913 450 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 MZT1Q08AG7 82 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 TMEM268Q5VZI3 342 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 OSR2Q8N2R0 312 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 RNF133Q8WVZ7 376 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 MALSU1Q96EH3 234 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 PRMT8Q9NR22 394 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-206ENST00000445265 SLCO1B1Q9Y6L6 691 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 UPK3AO75631 287 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 ZIC2O95409 532 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-206ENST00000445265 OR13C7P0DN81 318 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 TRIM61Q5EBN2 209 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 FAM209AQ5JX71 171 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 ADAM5Q6NVV9 412 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 DRAM2Q6UX65 266 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 TMEM182Q6ZP80 229 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-206ENST00000445265 FAM185AQ8N0U4 392 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 OR6X1Q8NH79 312 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 APH1AQ96BI3 265 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 ALPK2Q86TB3 2170 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 OR6C65A6NJZ3 312 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 IFNA4P05014 189 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 ATOH1Q92858 354 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-206ENST00000445265 FBXW5Q969U6 566 aa14.82□□□□□ -0.04
TCOF1-206ENST00000445265 FAM221AA4D161 298 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 LIPT2A6NK58 231 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 UMAD1C9J7I0 102 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 IGHV4-34P06331 123 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 INPP5JQ15735 1006 aaPredicted RBP14.81□□□□□ -0.04
TCOF1-206ENST00000445265 RPUSD3Q6P087 351 aaKnown RBP14.81□□□□□ -0.04
TCOF1-206ENST00000445265 STPG2Q8N412 459 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 SLC26A10Q8NG04 563 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 SFT2D1Q8WV19 159 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 HINT2Q9BX68 163 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 OBP2BQ9NPH6 170 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 CEBPZOSA8MTT3 80 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 CRHP06850 196 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 OR3A4PP47883 348 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 MGAT2Q10469 447 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 LRRTM1Q86UE6 522 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 TDHQ8IZJ6 230 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 D2HGDHQ8N465 521 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 COMMD1Q8N668 190 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 OR6S1Q8NH40 331 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 PLEKHF2Q9H8W4 249 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 DCTN6O00399 190 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 IGHV3-9P01782 118 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 TAGLN2P37802 199 aaKnown RBP14.81□□□□□ -0.04
TCOF1-206ENST00000445265 PRELID3BQ9Y3B1 194 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 VSIG10L2P0DP72 767 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 CXCL2P19875 107 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 FUT6P51993 359 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 SHEQ5VZ18 495 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 OR11H4Q8NGC9 324 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 OR10J5Q8NHC4 309 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 ZNF75AQ96N20 296 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 TECTBQ96PL2 329 aa14.81□□□□□ -0.04
TCOF1-206ENST00000445265 PURGQ9UJV8 347 aaKnown RBP14.81□□□□□ -0.04
TCOF1-206ENST00000445265 DXOO77932 396 aaKnown RBP14.8□□□□□ -0.04
TCOF1-206ENST00000445265 FSTP19883 344 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 ZNF658BQ4V348 819 aaPredicted RBP14.8□□□□□ -0.04
TCOF1-206ENST00000445265 C9orf40Q8IXQ3 194 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 PLXNA3P51805 1871 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 ZNF816-ZNF321PA0A0X1KG74 233 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 RNASEK-C17orf49H0YIS7 233 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 HSD17B6O14756 317 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 ANGPTL7O43827 346 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 CCL7P80098 99 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 RAB32Q13637 225 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 RAB35Q15286 201 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 OR5AP2Q8NGF4 316 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 OR56B2PQ8NGI1 322 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 ZNF721Q8TF20 911 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 SLC39A9Q9NUM3 307 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 ZNF391Q9UJN7 358 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 A0A0B4J293 547 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms