RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 DEC1Q9P2X7 70 aa3.01□□□□□ -1.93
HMGB3P6-201ENST00000444896 NPIPA1Q9UND3 350 aa3.01□□□□□ -1.93
HMGB3P6-201ENST00000444896 ANGPT4Q9Y264 503 aa3.01□□□□□ -1.93
HMGB3P6-201ENST00000444896 GMEB1Q9Y692 573 aa3.01□□□□□ -1.93
HMGB3P6-201ENST00000444896 PTPRSQ13332 1948 aa3.01□□□□□ -1.93
HMGB3P6-201ENST00000444896 MYOFQ9NZM1 2061 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 PRRC2BQ5JSZ5 2229 aaKnown RBP3□□□□□ -1.93
HMGB3P6-201ENST00000444896 ZNF99A8MXY4 864 aaPredicted RBP3□□□□□ -1.93
HMGB3P6-201ENST00000444896 GPR89AB7ZAQ6 455 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 C5orf58C9J3I9 102 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 C5orf67F2Z3F1 127 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 hCG_2039718K7EN88 272 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 TNFRSF11BO00300 401 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 SLC22A1O15245 554 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 PFDN1O60925 122 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 SCN2BO60939 215 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 SEMA3DO95025 777 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 C6orf47O95873 294 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 CISD3P0C7P0 127 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 GPR89BP0CG08 455 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 C1GALT1C1LP0DN25 315 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 HLA-EP13747 358 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 ANXA8P13928 327 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 ADRB3P13945 408 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 RRM2P31350 389 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 CCR8P51685 355 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 HNRNPA3P51991 378 aaKnown RBP3□□□□□ -1.93
HMGB3P6-201ENST00000444896 APOC4P55056 127 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 C21orf59P57076 290 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 SPIBQ01892 262 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 TLE4Q04727 773 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 C2orf80Q0P641 193 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 ARHGAP19Q14CB8 494 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 C16orf72Q14CZ0 275 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 RGNQ15493 299 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 MOGQ16653 247 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 DGUOKQ16854 277 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 ZNF630Q2M218 657 aaPredicted RBP3□□□□□ -1.93
HMGB3P6-201ENST00000444896 TP53I3Q53FA7 332 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 TCEAL5Q5H9L2 206 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 TMEM215Q68D42 235 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 ANKRD26P1Q6NSI1 321 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 TMIGD1Q6UXZ0 262 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 ACOT7LQ6ZUV0 252 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 GET4Q7L5D6 327 aaPredicted RBP3□□□□□ -1.93
HMGB3P6-201ENST00000444896 COMMD6Q7Z4G1 85 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 CYP4Z1Q86W10 505 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 CLECL1Q8IZS7 167 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 HS3ST5Q8IZT8 346 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 RNF175Q8N4F7 328 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 TBC1D19Q8N5T2 526 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 TTC29Q8NA56 475 aaPredicted RBP3□□□□□ -1.93
HMGB3P6-201ENST00000444896 ZNF540Q8NDQ6 660 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 BPIFB6Q8NFQ5 453 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 VN1R2Q8NFZ6 395 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 TTLQ8NG68 377 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 OR10G2Q8NGC3 310 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 FAM81AQ8TBF8 368 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 ZFP90Q8TF47 636 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 C16orf78Q8WTQ4 265 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 RASSF5Q8WWW0 418 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 S100ZQ8WXG8 99 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 ING5Q8WYH8 240 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 CHCHD10Q8WYQ3 142 aaPredicted RBP3□□□□□ -1.93
HMGB3P6-201ENST00000444896 SMARCD2Q92925 531 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 PPP1R14BQ96C90 147 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 PELI1Q96FA3 418 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 SH3YL1Q96HL8 342 aaPredicted RBP3□□□□□ -1.93
HMGB3P6-201ENST00000444896 OR4K3Q96R72 315 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 TBX15Q96SF7 602 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 PITX2Q99697 317 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 AIF1LQ9BQI0 150 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 SLC35A5Q9BS91 424 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 DOHHQ9BU89 302 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 ALG12Q9BV10 488 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 GABARAPL3Q9BY60 117 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 RAB33BQ9H082 229 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 LINC00597Q9H2U6 94 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 TMEM38AQ9H6F2 299 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 ZDHHC11Q9H8X9 412 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 HMG20AQ9NP66 347 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 EXD2Q9NVH0 621 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 ENPP5Q9UJA9 477 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 PSME2Q9UL46 239 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 RASD1Q9Y272 281 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 ASF1AQ9Y294 204 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 POFUT2Q9Y2G5 429 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 IFT52Q9Y366 437 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 FAM32AQ9Y421 112 aaKnown RBP3□□□□□ -1.93
HMGB3P6-201ENST00000444896 UGT2A1Q9Y4X1 527 aa3□□□□□ -1.93
HMGB3P6-201ENST00000444896 PDE4DIPQ5VU43 2346 aa2.99□□□□□ -1.93
HMGB3P6-201ENST00000444896 DOCK6Q96HP0 2047 aa2.99□□□□□ -1.93
HMGB3P6-201ENST00000444896 KIAA1549LQ6ZVL6 1849 aa2.99□□□□□ -1.93
HMGB3P6-201ENST00000444896 PSMB11A5LHX3 300 aa2.99□□□□□ -1.93
HMGB3P6-201ENST00000444896 ARRDC5A6NEK1 342 aa2.99□□□□□ -1.93
HMGB3P6-201ENST00000444896 GABRR3A8MPY1 467 aa2.99□□□□□ -1.93
HMGB3P6-201ENST00000444896 M0QX08 132 aa2.99□□□□□ -1.93
HMGB3P6-201ENST00000444896 M0R3G1 203 aa2.99□□□□□ -1.93
HMGB3P6-201ENST00000444896 KPNA4O00629 521 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P6-201ENST00000444896 KMOO15229 486 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms