RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 TRAPPC6BQ86SZ2 158 aa16.4■□□□□ 0.22
SEMA3D-202ENST00000444867 FAM89BQ8N5H3 189 aa16.4■□□□□ 0.22
SEMA3D-202ENST00000444867 TMEM104Q8NE00 496 aa16.4■□□□□ 0.22
SEMA3D-202ENST00000444867 DACT3Q96B18 629 aaPredicted RBP16.4■□□□□ 0.22
SEMA3D-202ENST00000444867 GINS4Q9BRT9 223 aa16.4■□□□□ 0.22
SEMA3D-202ENST00000444867 ZMAT3Q9HA38 289 aaKnown RBP16.4■□□□□ 0.22
SEMA3D-202ENST00000444867 NPDC1Q9NQX5 325 aaPredicted RBP16.4■□□□□ 0.22
SEMA3D-202ENST00000444867 GPR173Q9NS66 373 aa16.4■□□□□ 0.22
SEMA3D-202ENST00000444867 ING4Q9UNL4 249 aa16.4■□□□□ 0.22
SEMA3D-202ENST00000444867 A0A096LPE4 126 aa16.39■□□□□ 0.21
SEMA3D-202ENST00000444867 A0A0A6YYD4 124 aa16.39■□□□□ 0.21
SEMA3D-202ENST00000444867 A0A1W2PPZ6 126 aa16.39■□□□□ 0.21
SEMA3D-202ENST00000444867 SNRPGP15A8MWD9 76 aa16.39■□□□□ 0.21
SEMA3D-202ENST00000444867 ZNF736B4DX44 427 aaPredicted RBP16.39■□□□□ 0.21
SEMA3D-202ENST00000444867 SULT1A3P0DMM9 295 aa16.39■□□□□ 0.21
SEMA3D-202ENST00000444867 SULT1A4P0DMN0 295 aa16.39■□□□□ 0.21
SEMA3D-202ENST00000444867 SDHBP21912 280 aa16.39■□□□□ 0.21
SEMA3D-202ENST00000444867 C9orf135Q5VTT2 229 aa16.39■□□□□ 0.21
SEMA3D-202ENST00000444867 LHFPL2Q6ZUX7 228 aa16.39■□□□□ 0.21
SEMA3D-202ENST00000444867 OR4D10Q8NGI6 311 aa16.39■□□□□ 0.21
SEMA3D-202ENST00000444867 OR51S1Q8NGJ8 323 aa16.39■□□□□ 0.21
SEMA3D-202ENST00000444867 NPRL2Q8WTW4 380 aa16.39■□□□□ 0.21
SEMA3D-202ENST00000444867 PIGTQ969N2 578 aa16.39■□□□□ 0.21
SEMA3D-202ENST00000444867 CMBLQ96DG6 245 aa16.39■□□□□ 0.21
SEMA3D-202ENST00000444867 RAB3CQ96E17 227 aa16.39■□□□□ 0.21
SEMA3D-202ENST00000444867 SELENOIQ9C0D9 397 aa16.39■□□□□ 0.21
SEMA3D-202ENST00000444867 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.39■□□□□ 0.21
SEMA3D-202ENST00000444867 CLCF1Q9UBD9 225 aa16.39■□□□□ 0.21
SEMA3D-202ENST00000444867 SSNA1O43805 119 aa16.38■□□□□ 0.21
SEMA3D-202ENST00000444867 HLA-HP01893 362 aa16.38■□□□□ 0.21
SEMA3D-202ENST00000444867 ANXA3P12429 323 aa16.38■□□□□ 0.21
SEMA3D-202ENST00000444867 EDN3P14138 238 aa16.38■□□□□ 0.21
SEMA3D-202ENST00000444867 HIST1H1DP16402 221 aaKnown RBP16.38■□□□□ 0.21
SEMA3D-202ENST00000444867 TBPP20226 339 aa16.38■□□□□ 0.21
SEMA3D-202ENST00000444867 GZMKP49863 264 aa16.38■□□□□ 0.21
SEMA3D-202ENST00000444867 FOXG1P55316 489 aaPredicted RBP16.38■□□□□ 0.21
SEMA3D-202ENST00000444867 ZNF92Q03936 586 aa16.38■□□□□ 0.21
SEMA3D-202ENST00000444867 PLP2Q04941 152 aa16.38■□□□□ 0.21
SEMA3D-202ENST00000444867 TNK1Q13470 666 aa16.38■□□□□ 0.21
SEMA3D-202ENST00000444867 ARL6IP1Q15041 203 aa16.38■□□□□ 0.21
SEMA3D-202ENST00000444867 ZMYND11Q15326 602 aa16.38■□□□□ 0.21
SEMA3D-202ENST00000444867 SLC22A6Q4U2R8 563 aa16.38■□□□□ 0.21
SEMA3D-202ENST00000444867 ZADH2Q8N4Q0 377 aa16.38■□□□□ 0.21
SEMA3D-202ENST00000444867 OR11H7Q8NGC8 314 aa16.38■□□□□ 0.21
SEMA3D-202ENST00000444867 OR1K1Q8NGR3 316 aa16.38■□□□□ 0.21
SEMA3D-202ENST00000444867 OR8S1Q8NH09 359 aa16.38■□□□□ 0.21
SEMA3D-202ENST00000444867 NANOS1Q8WY41 292 aaKnown RBP16.38■□□□□ 0.21
SEMA3D-202ENST00000444867 SLC25A21Q9BQT8 299 aaPredicted RBP16.38■□□□□ 0.21
SEMA3D-202ENST00000444867 NICN1Q9BSH3 213 aa16.38■□□□□ 0.21
SEMA3D-202ENST00000444867 TM2D1Q9BX74 207 aa16.38■□□□□ 0.21
SEMA3D-202ENST00000444867 BANF2Q9H503 90 aa16.38■□□□□ 0.21
SEMA3D-202ENST00000444867 PRSS50Q9UI38 385 aa16.38■□□□□ 0.21
SEMA3D-202ENST00000444867 ELF5Q9UKW6 265 aaPredicted RBP16.38■□□□□ 0.21
SEMA3D-202ENST00000444867 LOC100509620A0A075B734 347 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 ZNF816-ZNF321PA0A0X1KG74 233 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 DISC1C4P0D8 188 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 SERPINA5P05154 406 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 GNB3P16520 340 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 MPZP25189 248 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 MTCP1P56278 107 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 GNG2P59768 71 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 ZP1P60852 638 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 RAB1AP62820 205 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 IGFL3Q6UXB1 125 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 DVL3Q92997 716 aaPredicted RBP16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 SARAFQ96BY9 339 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 IFT46Q9NQC8 304 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 KCNN3Q9UGI6 736 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 SCP2D1Q9UJQ7 156 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 ANAPC10Q9UM13 185 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 FREM2Q5SZK8 3169 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 MYO7BQ6PIF6 2116 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 CNOT1A5YKK6 2376 aaKnown RBP16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 MEIKINA0A087WXM9 373 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 PYCARD-AS1I3L0S3 204 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 NRASP01111 189 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 HPXP02790 462 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 CD79AP11912 226 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 MGMTP16455 207 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 RAD52P43351 418 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 CBX5P45973 191 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 RBP2P50120 134 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 BEST4Q8NFU0 473 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 OR51T1Q8NGJ9 327 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 OR5D18Q8NGL1 313 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 BCL2L2Q92843 193 aaPredicted RBP16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 APOBEC3DQ96AK3 386 aaPredicted RBP16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 BORCS8Q96FH0 119 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 OPA3Q9H6K4 179 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 C12orf49Q9H741 205 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 BEX1Q9HBH7 125 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 PLSCR2Q9NRY7 297 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 SLC2A8Q9NY64 477 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 PTTG3PQ9NZH4 202 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 SLC7A11Q9UPY5 501 aa16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 TNRC6AQ8NDV7 1962 aaKnown RBP16.37■□□□□ 0.21
SEMA3D-202ENST00000444867 RTTNQ86VV8 2226 aa16.36■□□□□ 0.21
SEMA3D-202ENST00000444867 FOXI3A8MTJ6 420 aaPredicted RBP16.36■□□□□ 0.21
SEMA3D-202ENST00000444867 MFNGO00587 321 aa16.36■□□□□ 0.21
SEMA3D-202ENST00000444867 SOCS1O15524 211 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms