RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 TDGF1P3P51864 188 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 DLX6P56179 175 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 VBP1P61758 197 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 REEP5Q00765 189 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 SMARCB1Q12824 385 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 GUCA2BQ16661 112 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 RFX4Q33E94 735 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 TTLL9Q3SXZ7 439 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 STEAP4Q687X5 459 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 PPP1R2P3Q6NXS1 205 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 FAAP20Q6NZ36 180 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 FAM173BQ6P4H8 233 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 Q6ZTC4 211 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 STRADAQ7RTN6 431 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 C10orf107Q8IVU9 208 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 SLC34A3Q8N130 599 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 NEIL3Q8TAT5 605 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 ACTL9Q8TC94 416 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 RNF138Q8WVD3 245 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 FAM151AQ8WW52 585 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 NTAN1Q96AB6 310 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 OTUB2Q96DC9 234 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 MRAP2Q96G30 205 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 NRIP2Q9BQI9 281 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 TRIM45Q9H8W5 580 aaPredicted RBP3.63□□□□□ -1.83
LSM5-205ENST00000409952 EDA2RQ9HAV5 297 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 EXOSC4Q9NPD3 245 aaKnown RBP3.63□□□□□ -1.83
LSM5-205ENST00000409952 TAS2R9Q9NYW1 312 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 DNAJC27Q9NZQ0 273 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 UVRAGQ9P2Y5 699 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 CLEC4EQ9ULY5 219 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 RLFQ13129 1914 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 F5H768 121 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 J3QT63 122 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 TCAPO15273 167 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 UGT2B11O75310 529 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 THY1P04216 161 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 IFNA6P05013 189 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 CD3GP09693 182 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 CELP19835 753 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 F8A1P23610 371 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 PAX6P26367 422 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 TTPAP49638 278 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 DIO3P55073 304 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 CLDN12P56749 244 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 SLC7A9P82251 487 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 MRPS25P82663 173 aaKnown RBP3.62□□□□□ -1.83
LSM5-205ENST00000409952 CKAP4Q07065 602 aaKnown RBP3.62□□□□□ -1.83
LSM5-205ENST00000409952 MGAT3Q09327 533 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 MLLT11Q13015 90 aaPredicted RBP3.62□□□□□ -1.83
LSM5-205ENST00000409952 RGNQ15493 299 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 PRSS8Q16651 343 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 TBC1D28Q2M2D7 210 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 DNAL1Q4LDG9 190 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 AVPI1Q5T686 147 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 OGFRL1Q5TC84 451 aaPredicted RBP3.62□□□□□ -1.83
LSM5-205ENST00000409952 LPCAT4Q643R3 524 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 TTC33Q6PID6 262 aaPredicted RBP3.62□□□□□ -1.83
LSM5-205ENST00000409952 TMEM179BQ7Z7N9 219 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 BLIDQ8IZY5 108 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 STPG2Q8N412 459 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 COX18Q8N8Q8 333 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 GPR26Q8NDV2 337 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 CCDC54Q8NEL0 328 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 OR8K1Q8NGG5 319 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 OR5D18Q8NGL1 313 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 OR6N1Q8NGY5 312 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 NELFBQ8WX92 580 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 PTH2Q96A98 100 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 DDIT4LQ96D03 193 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 Q96MT0 163 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 SLC25A2Q9BXI2 301 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 C12orf4Q9NQ89 552 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 FAM49BQ9NUQ9 324 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 CD84Q9UIB8 345 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 ATPIF1Q9UII2 106 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 RAB22AQ9UL26 194 aa3.62□□□□□ -1.83
LSM5-205ENST00000409952 NDRG2Q9UN36 371 aaKnown RBP3.62□□□□□ -1.83
LSM5-205ENST00000409952 A0A0J9YXV3 536 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 PRR23AA6NEV1 266 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 HAT1O14929 419 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 BIRC5O15392 142 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 ZNF354AO60765 605 aaPredicted RBP3.61□□□□□ -1.83
LSM5-205ENST00000409952 TNFSF13O75888 250 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 VAMP5O95183 116 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 NSA2O95478 260 aaKnown RBP3.61□□□□□ -1.83
LSM5-205ENST00000409952 SLC25A27O95847 323 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 IGKV1D-16P01601 117 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 FABP3P05413 133 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 GIPP09681 153 aaPredicted RBP3.61□□□□□ -1.83
LSM5-205ENST00000409952 C8orf88P0DMB2 117 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 ZNF30P17039 623 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 PSMB1P20618 241 aaKnown RBP3.61□□□□□ -1.83
LSM5-205ENST00000409952 FUT3P21217 361 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 CXCR1P25024 350 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 CD70P32970 193 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 CDKN2BP42772 138 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 TAS2R46P59540 309 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms