RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 CYB5AP00167 134 aa16.45■□□□□ 0.22
USP39-202ENST00000409025 FCER2P06734 321 aa16.45■□□□□ 0.22
USP39-202ENST00000409025 PRSS12P56730 875 aa16.45■□□□□ 0.22
USP39-202ENST00000409025 CBX3Q13185 183 aa16.45■□□□□ 0.22
USP39-202ENST00000409025 HIKESHIQ53FT3 197 aa16.45■□□□□ 0.22
USP39-202ENST00000409025 FAM214BQ7L5A3 538 aa16.45■□□□□ 0.22
USP39-202ENST00000409025 C1QL2Q7Z5L3 287 aa16.45■□□□□ 0.22
USP39-202ENST00000409025 FJX1Q86VR8 437 aa16.45■□□□□ 0.22
USP39-202ENST00000409025 OR56B1Q8NGI3 324 aa16.45■□□□□ 0.22
USP39-202ENST00000409025 APOBEC3DQ96AK3 386 aaPredicted RBP16.45■□□□□ 0.22
USP39-202ENST00000409025 DACT3Q96B18 629 aaPredicted RBP16.45■□□□□ 0.22
USP39-202ENST00000409025 DMRTB1Q96MA1 342 aa16.45■□□□□ 0.22
USP39-202ENST00000409025 ING3Q9NXR8 418 aa16.45■□□□□ 0.22
USP39-202ENST00000409025 FLVCR2Q9UPI3 526 aa16.45■□□□□ 0.22
USP39-202ENST00000409025 FAM186AA6NE01 2351 aa16.45■□□□□ 0.22
USP39-202ENST00000409025 MED12LQ86YW9 2145 aa16.44■□□□□ 0.22
USP39-202ENST00000409025 A0A0A6YYD4 124 aa16.44■□□□□ 0.22
USP39-202ENST00000409025 ZNF816-ZNF321PA0A0X1KG74 233 aa16.44■□□□□ 0.22
USP39-202ENST00000409025 A0A1W2PP11 408 aa16.44■□□□□ 0.22
USP39-202ENST00000409025 ARPC1BO15143 372 aaKnown RBP16.44■□□□□ 0.22
USP39-202ENST00000409025 CCL2P13500 99 aa16.44■□□□□ 0.22
USP39-202ENST00000409025 GNB3P16520 340 aa16.44■□□□□ 0.22
USP39-202ENST00000409025 ZBTB37Q5TC79 503 aa16.44■□□□□ 0.22
USP39-202ENST00000409025 TFAP2EQ6VUC0 442 aa16.44■□□□□ 0.22
USP39-202ENST00000409025 Q6ZS92 163 aa16.44■□□□□ 0.22
USP39-202ENST00000409025 LHFPL2Q6ZUX7 228 aa16.44■□□□□ 0.22
USP39-202ENST00000409025 TRAPPC6BQ86SZ2 158 aa16.44■□□□□ 0.22
USP39-202ENST00000409025 ZNF584Q8IVC4 421 aa16.44■□□□□ 0.22
USP39-202ENST00000409025 GCNT2Q8N0V5 402 aa16.44■□□□□ 0.22
USP39-202ENST00000409025 OR4D10Q8NGI6 311 aa16.44■□□□□ 0.22
USP39-202ENST00000409025 DVL3Q92997 716 aaPredicted RBP16.44■□□□□ 0.22
USP39-202ENST00000409025 WNT2BQ93097 391 aa16.44■□□□□ 0.22
USP39-202ENST00000409025 POM121L2Q96KW2 1035 aa16.44■□□□□ 0.22
USP39-202ENST00000409025 FYTTD1Q96QD9 318 aaKnown RBP16.44■□□□□ 0.22
USP39-202ENST00000409025 KCNN3Q9UGI6 736 aa16.44■□□□□ 0.22
USP39-202ENST00000409025 POU2F3Q9UKI9 436 aa16.44■□□□□ 0.22
USP39-202ENST00000409025 FAM230AA0A1W2PPH8 454 aa16.43■□□□□ 0.22
USP39-202ENST00000409025 SDHBP21912 280 aa16.43■□□□□ 0.22
USP39-202ENST00000409025 APLNRP35414 380 aa16.43■□□□□ 0.22
USP39-202ENST00000409025 NKX2-5P52952 324 aaPredicted RBP16.43■□□□□ 0.22
USP39-202ENST00000409025 RPS27AP62979 156 aaKnown RBP16.43■□□□□ 0.22
USP39-202ENST00000409025 MALLQ13021 153 aa16.43■□□□□ 0.22
USP39-202ENST00000409025 RBMS2Q15434 407 aaKnown RBP16.43■□□□□ 0.22
USP39-202ENST00000409025 STEAP2Q8NFT2 490 aa16.43■□□□□ 0.22
USP39-202ENST00000409025 OR51T1Q8NGJ9 327 aa16.43■□□□□ 0.22
USP39-202ENST00000409025 RAB3CQ96E17 227 aa16.43■□□□□ 0.22
USP39-202ENST00000409025 BORCS8Q96FH0 119 aa16.43■□□□□ 0.22
USP39-202ENST00000409025 TECTBQ96PL2 329 aa16.43■□□□□ 0.22
USP39-202ENST00000409025 ELL3Q9HB65 397 aaPredicted RBP16.43■□□□□ 0.22
USP39-202ENST00000409025 SLC7A11Q9UPY5 501 aa16.43■□□□□ 0.22
USP39-202ENST00000409025 AHRRA9YTQ3 701 aa16.43■□□□□ 0.22
USP39-202ENST00000409025 ZNF736B4DX44 427 aaPredicted RBP16.43■□□□□ 0.22
USP39-202ENST00000409025 SOCS1O15524 211 aa16.43■□□□□ 0.22
USP39-202ENST00000409025 ICMTO60725 284 aa16.43■□□□□ 0.22
USP39-202ENST00000409025 RAB3DO95716 219 aa16.43■□□□□ 0.22
USP39-202ENST00000409025 GSTP1P09211 210 aaKnown RBP16.43■□□□□ 0.22
USP39-202ENST00000409025 TMEM225BP0DP42 221 aa16.43■□□□□ 0.22
USP39-202ENST00000409025 MGMTP16455 207 aa16.43■□□□□ 0.22
USP39-202ENST00000409025 SPINK2P20155 84 aa16.43■□□□□ 0.22
USP39-202ENST00000409025 SERPINA2P20848 420 aa16.43■□□□□ 0.22
USP39-202ENST00000409025 EIF2S3P41091 472 aaKnown RBP16.43■□□□□ 0.22
USP39-202ENST00000409025 RBP2P50120 134 aa16.43■□□□□ 0.22
USP39-202ENST00000409025 TGFBR3Q03167 851 aa16.43■□□□□ 0.22
USP39-202ENST00000409025 TCTE3Q8IZS6 198 aa16.43■□□□□ 0.22
USP39-202ENST00000409025 BEX1Q9HBH7 125 aa16.43■□□□□ 0.22
USP39-202ENST00000409025 MOV10Q9HCE1 1003 aaKnown RBP16.43■□□□□ 0.22
USP39-202ENST00000409025 OR14I1A6ND48 311 aa16.42■□□□□ 0.22
USP39-202ENST00000409025 SERPINA5P05154 406 aa16.42■□□□□ 0.22
USP39-202ENST00000409025 ZP1P60852 638 aa16.42■□□□□ 0.22
USP39-202ENST00000409025 GUSBP1Q15486 140 aa16.42■□□□□ 0.22
USP39-202ENST00000409025 CD276Q5ZPR3 534 aa16.42■□□□□ 0.22
USP39-202ENST00000409025 OR2A2Q6IF42 318 aa16.42■□□□□ 0.22
USP39-202ENST00000409025 MOB3CQ70IA8 216 aa16.42■□□□□ 0.22
USP39-202ENST00000409025 OR51S1Q8NGJ8 323 aa16.42■□□□□ 0.22
USP39-202ENST00000409025 PIGCQ92535 297 aa16.42■□□□□ 0.22
USP39-202ENST00000409025 GINS4Q9BRT9 223 aa16.42■□□□□ 0.22
USP39-202ENST00000409025 REPIN1Q9BWE0 567 aaKnown RBP16.42■□□□□ 0.22
USP39-202ENST00000409025 A0A1B0GUH1 482 aa16.41■□□□□ 0.22
USP39-202ENST00000409025 HIST1H1DP16402 221 aaKnown RBP16.41■□□□□ 0.22
USP39-202ENST00000409025 FUT6P51993 359 aa16.41■□□□□ 0.22
USP39-202ENST00000409025 GNG2P59768 71 aa16.41■□□□□ 0.22
USP39-202ENST00000409025 FCN2Q15485 313 aa16.41■□□□□ 0.22
USP39-202ENST00000409025 KCNJ8Q15842 424 aa16.41■□□□□ 0.22
USP39-202ENST00000409025 ST3GAL2Q16842 350 aa16.41■□□□□ 0.22
USP39-202ENST00000409025 METTL11BQ5VVY1 283 aa16.41■□□□□ 0.22
USP39-202ENST00000409025 PLCXD3Q63HM9 321 aa16.41■□□□□ 0.22
USP39-202ENST00000409025 MRPL21Q7Z2W9 205 aaKnown RBP16.41■□□□□ 0.22
USP39-202ENST00000409025 FAM89BQ8N5H3 189 aa16.41■□□□□ 0.22
USP39-202ENST00000409025 CNEP1R1Q8N9A8 125 aa16.41■□□□□ 0.22
USP39-202ENST00000409025 C9orf106Q8NAJ2 232 aa16.41■□□□□ 0.22
USP39-202ENST00000409025 ZBTB8BQ8NAP8 495 aaPredicted RBP16.41■□□□□ 0.22
USP39-202ENST00000409025 OR10K1Q8NGX5 313 aa16.41■□□□□ 0.22
USP39-202ENST00000409025 NUDCD2Q8WVJ2 157 aa16.41■□□□□ 0.22
USP39-202ENST00000409025 METTL9Q9H1A3 318 aa16.41■□□□□ 0.22
USP39-202ENST00000409025 IFT46Q9NQC8 304 aa16.41■□□□□ 0.22
USP39-202ENST00000409025 CEP250Q9BV73 2442 aa16.41■□□□□ 0.22
USP39-202ENST00000409025 PDGFAP04085 211 aa16.41■□□□□ 0.22
USP39-202ENST00000409025 CD74P04233 296 aa16.41■□□□□ 0.22
USP39-202ENST00000409025 ATP1B3P54709 279 aa16.41■□□□□ 0.22
USP39-202ENST00000409025 NHLH1Q02575 133 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms