RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 ATP1B3P54709 279 aa20.88■□□□□ 0.93
PABPN1-202ENST00000397276 GRB2P62993 217 aaKnown RBP20.88■□□□□ 0.93
PABPN1-202ENST00000397276 ENDOGQ14249 297 aaKnown RBP20.88■□□□□ 0.93
PABPN1-202ENST00000397276 RHOUQ7L0Q8 258 aa20.88■□□□□ 0.93
PABPN1-202ENST00000397276 DOK3Q7L591 496 aa20.88■□□□□ 0.93
PABPN1-202ENST00000397276 LDLRAD3Q86YD5 345 aa20.88■□□□□ 0.93
PABPN1-202ENST00000397276 MRGPRFQ96AM1 343 aa20.88■□□□□ 0.93
PABPN1-202ENST00000397276 PDCD10Q9BUL8 212 aa20.88■□□□□ 0.93
PABPN1-202ENST00000397276 EIF1BO60739 113 aaKnown RBP20.87■□□□□ 0.93
PABPN1-202ENST00000397276 ATG12O94817 140 aa20.87■□□□□ 0.93
PABPN1-202ENST00000397276 PPIAP62937 165 aaKnown RBP20.87■□□□□ 0.93
PABPN1-202ENST00000397276 SRSF3P84103 164 aaKnown RBP20.87■□□□□ 0.93
PABPN1-202ENST00000397276 PLAC9Q5JTB6 97 aa20.87■□□□□ 0.93
PABPN1-202ENST00000397276 PGAP1Q75T13 922 aa20.87■□□□□ 0.93
PABPN1-202ENST00000397276 TSNAXQ99598 290 aaKnown RBP20.87■□□□□ 0.93
PABPN1-202ENST00000397276 ESRP2Q9H6T0 727 aaKnown RBP20.87■□□□□ 0.93
PABPN1-202ENST00000397276 TMEM17Q86X19 198 aa20.87■□□□□ 0.93
PABPN1-202ENST00000397276 KCNRGQ8N5I3 272 aa20.87■□□□□ 0.93
PABPN1-202ENST00000397276 GJC3Q8NFK1 279 aa20.87■□□□□ 0.93
PABPN1-202ENST00000397276 OR14K1Q8NGZ2 314 aa20.87■□□□□ 0.93
PABPN1-202ENST00000397276 ULBP2Q9BZM5 246 aa20.87■□□□□ 0.93
PABPN1-202ENST00000397276 SH2D2AQ9NP31 389 aa20.87■□□□□ 0.93
PABPN1-202ENST00000397276 ASF1BQ9NVP2 202 aa20.87■□□□□ 0.93
PABPN1-202ENST00000397276 PLEK2Q9NYT0 353 aa20.87■□□□□ 0.93
PABPN1-202ENST00000397276 TNFSF18Q9UNG2 199 aa20.87■□□□□ 0.93
PABPN1-202ENST00000397276 KLF2Q9Y5W3 355 aaPredicted RBP20.87■□□□□ 0.93
PABPN1-202ENST00000397276 H7C2Y5 167 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 DHHO43323 396 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 CDC14BO60729 498 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 CBR3O75828 277 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 MELTFP08582 738 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 PRSS12P56730 875 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 Q0VFX4 171 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 MEF2DQ14814 521 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 C1QL2Q7Z5L3 287 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 ZIC4Q8N9L1 334 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 OR14L1PQ8NHC6 308 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 C1orf147Q96MC9 270 aaPredicted RBP20.86■□□□□ 0.93
PABPN1-202ENST00000397276 PRRT1Q99946 306 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 NAA11Q9BSU3 229 aaPredicted RBP20.86■□□□□ 0.93
PABPN1-202ENST00000397276 FAM117AQ9C073 453 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 CST11Q9H112 138 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 MLXQ9UH92 298 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 PLEKHA6Q9Y2H5 1048 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 FAM25EA8MYX2 175 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 LINC01387J3KSC0 135 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 FAHP16930 419 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 CD34P28906 385 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 CSNK2A1P68400 391 aaPredicted RBP20.86■□□□□ 0.93
PABPN1-202ENST00000397276 ZXDAP98168 799 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 PEAR1Q5VY43 1037 aaPredicted RBP20.86■□□□□ 0.93
PABPN1-202ENST00000397276 CASTOR1Q8WTX7 329 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 PPP1R1CQ8WVI7 109 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 NABP1Q96AH0 204 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 RAB3CQ96E17 227 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 C12orf57Q99622 126 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 USB1Q9BQ65 265 aaKnown RBP20.86■□□□□ 0.93
PABPN1-202ENST00000397276 EDEM2Q9BV94 578 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 TMEM59Q9BXS4 323 aa20.86■□□□□ 0.93
PABPN1-202ENST00000397276 A0A0D9SG52 128 aa20.85■□□□□ 0.93
PABPN1-202ENST00000397276 OR2AT4A6NND4 320 aa20.85■□□□□ 0.93
PABPN1-202ENST00000397276 IFNA6P05013 189 aa20.85■□□□□ 0.93
PABPN1-202ENST00000397276 RFPL3SP0C7P2 107 aa20.85■□□□□ 0.93
PABPN1-202ENST00000397276 AKR1C4P17516 323 aa20.85■□□□□ 0.93
PABPN1-202ENST00000397276 LSM6P62312 80 aaKnown RBP20.85■□□□□ 0.93
PABPN1-202ENST00000397276 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.85■□□□□ 0.93
PABPN1-202ENST00000397276 TMEM123Q8N131 208 aa20.85■□□□□ 0.93
PABPN1-202ENST00000397276 RHBDD1Q8TEB9 315 aa20.85■□□□□ 0.93
PABPN1-202ENST00000397276 TMEM54Q969K7 222 aa20.85■□□□□ 0.93
PABPN1-202ENST00000397276 MICU1Q9BPX6 476 aa20.85■□□□□ 0.93
PABPN1-202ENST00000397276 PIGQQ9BRB3 760 aa20.85■□□□□ 0.93
PABPN1-202ENST00000397276 TRAPPC6AO75865 159 aa20.85■□□□□ 0.93
PABPN1-202ENST00000397276 TMEM50BP56557 158 aa20.85■□□□□ 0.93
PABPN1-202ENST00000397276 RAC1P63000 192 aa20.85■□□□□ 0.93
PABPN1-202ENST00000397276 PPP1R1AQ13522 171 aa20.85■□□□□ 0.93
PABPN1-202ENST00000397276 RSPO1Q2MKA7 263 aaPredicted RBP20.85■□□□□ 0.93
PABPN1-202ENST00000397276 HFEQ30201 348 aa20.85■□□□□ 0.93
PABPN1-202ENST00000397276 C11orf87Q6NUJ2 197 aa20.85■□□□□ 0.93
PABPN1-202ENST00000397276 ADAD2Q8NCV1 583 aaKnown RBP20.85■□□□□ 0.93
PABPN1-202ENST00000397276 PADI1Q9ULC6 663 aa20.85■□□□□ 0.93
PABPN1-202ENST00000397276 P04436 131 aa20.85■□□□□ 0.93
PABPN1-202ENST00000397276 VAMP1P23763 118 aa20.85■□□□□ 0.93
PABPN1-202ENST00000397276 DLSTP36957 453 aa20.85■□□□□ 0.93
PABPN1-202ENST00000397276 CASRP41180 1078 aa20.85■□□□□ 0.93
PABPN1-202ENST00000397276 B2MP61769 119 aa20.85■□□□□ 0.93
PABPN1-202ENST00000397276 OR5M8Q8NGP6 311 aa20.85■□□□□ 0.93
PABPN1-202ENST00000397276 KCNG3Q8TAE7 436 aa20.85■□□□□ 0.93
PABPN1-202ENST00000397276 NTF4P34130 210 aa20.84■□□□□ 0.93
PABPN1-202ENST00000397276 SNTB1Q13884 538 aaKnown RBP20.84■□□□□ 0.93
PABPN1-202ENST00000397276 DCAF12Q5T6F0 453 aa20.84■□□□□ 0.93
PABPN1-202ENST00000397276 OR4K15Q8NH41 348 aa20.84■□□□□ 0.93
PABPN1-202ENST00000397276 ROBO4Q8WZ75 1007 aa20.84■□□□□ 0.93
PABPN1-202ENST00000397276 FBXO17Q96EF6 278 aa20.84■□□□□ 0.93
PABPN1-202ENST00000397276 ARHGAP5-AS1Q96IT6 56 aa20.84■□□□□ 0.93
PABPN1-202ENST00000397276 ZNF107Q9UII5 783 aaPredicted RBP20.84■□□□□ 0.93
PABPN1-202ENST00000397276 TCFL5Q9UL49 500 aa20.84■□□□□ 0.93
PABPN1-202ENST00000397276 ARID1AO14497 2285 aa20.84■□□□□ 0.93
PABPN1-202ENST00000397276 STMND1H3BQB6 276 aa20.84■□□□□ 0.93
PABPN1-202ENST00000397276 BCL2L11O43521 198 aa20.84■□□□□ 0.93
PABPN1-202ENST00000397276 RAD51DO75771 328 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms