RNA–Protein interactions for RNA: ENST00000396595.7

LIMCH1-203, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-203ENST00000396595 DECR2Q9NUI1 292 aa9.26□□□□□ -0.93
LIMCH1-203ENST00000396595 A0A0A6YYD5 115 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 FRG2CA6NGY1 282 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 RPS23P62266 143 aaKnown RBP9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 RDH5Q92781 318 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 GPR87Q9BY21 358 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 MED29Q9NX70 200 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 MRPS2Q9Y399 296 aaKnown RBP9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 OR51B4Q9Y5P0 310 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 CRYABP02511 175 aaKnown RBP9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 CT45A10P0DMU9 189 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 IGFBP6P24592 240 aaPredicted RBP9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 SUMO3P55854 103 aaPredicted RBP9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 BTG2P78543 158 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 CDONQ4KMG0 1287 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 Q6ZNB5 142 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 TMEM37Q8WXS4 190 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 RBM38Q9H0Z9 239 aaKnown RBP9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 C12orf49Q9H741 205 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 SIRT5Q9NXA8 310 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 MMP17Q9ULZ9 603 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 A0A1B0GUL6 1792 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 H0Y8X5 98 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 IGHV3-9P01782 118 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 DEFA4P12838 97 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 CLN3Q13286 438 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 CDC20BQ86Y33 519 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 SPNS2Q8IVW8 549 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 NT5CQ8TCD5 201 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 OR8B4Q96RC9 309 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 CHRDL1Q9BU40 450 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 CD99P14209 185 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 FZD2Q14332 565 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 YRDCQ86U90 279 aaKnown RBP9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 ZDHHC22Q8N966 263 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 PATE1Q8WXA2 126 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 CMBLQ96DG6 245 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 MYEOVQ96EZ4 313 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 GINS3Q9BRX5 216 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 EGLN1Q9GZT9 426 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 C6orf106Q9H6K1 298 aaPredicted RBP9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 SLC17A4Q9Y2C5 497 aa9.25□□□□□ -0.93
LIMCH1-203ENST00000396595 NRG2O14511 850 aaPredicted RBP9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 GPR12P47775 334 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 FAM209AQ5JX71 171 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 BTLAQ7Z6A9 289 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 ZNF429Q86V71 674 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 ANKRD10Q9NXR5 420 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 SLC23A1Q9UHI7 598 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 MEIKINA0A087WXM9 373 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 DBX1A6NMT0 343 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 CAPZBP47756 277 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 CCR5P51681 352 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 DMWDQ09019 674 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 VWA2Q5GFL6 755 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 ELFN2Q5R3F8 820 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 OR5AS1Q8N127 324 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 BATF2Q8N1L9 274 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 OR4A4PQ8NGN8 299 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 HGDQ93099 445 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 FAM131CQ96AQ9 280 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 OR10C1Q96KK4 312 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 MRPL13Q9BYD1 178 aaKnown RBP9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 TWSG1Q9GZX9 223 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 SIT1Q9Y3P8 196 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 DNPH1O43598 174 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 RRASP10301 218 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 ATF1P18846 271 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 CRYBB2P43320 205 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 SLC25A1P53007 311 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 LGALS4P56470 323 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 UBE3DQ7Z6J8 389 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 FBXL6Q8N531 539 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 SCCPDHQ8NBX0 429 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 SLC39A7Q92504 469 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 ORAI1Q96D31 301 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 BOD1Q96IK1 185 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 PSENENQ9NZ42 101 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 HDGFL3Q9Y3E1 203 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 NUP205Q92621 2012 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 RAB27BO00194 218 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 PLRG1O43660 514 aaKnown RBP9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 THBS4P35443 961 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 CSN1S1P47710 185 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 NOVA1P51513 510 aaKnown RBP9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 TCTAP57738 103 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 PP6455Q8WZ26 134 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 SIRT7Q9NRC8 400 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 SLC6A13Q9NSD5 602 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 FBXO34Q9NWN3 711 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 A0A087WUJ7 227 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 FAM221AA4D161 298 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 DHHO43323 396 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 B4GALNT1Q00973 533 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 KCNAB1Q14722 419 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 MAMSTRQ6ZN01 415 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 MSRB3Q8IXL7 192 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 OTOSQ8NHW6 89 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 CXorf58Q96LI9 332 aa9.24□□□□□ -0.93
LIMCH1-203ENST00000396595 AKAP11Q9UKA4 1901 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms