RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 NOX4Q9NPH5 578 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 MUC1P15941 1255 aaPredicted RBP13.66□□□□□ -0.22
PTPRK-208ENST00000392449 BPIFB3P59826 476 aa13.66□□□□□ -0.22
PTPRK-208ENST00000392449 PDCD1Q15116 288 aa13.66□□□□□ -0.22
PTPRK-208ENST00000392449 STUMQ69YW2 141 aa13.66□□□□□ -0.22
PTPRK-208ENST00000392449 TREML4Q6UXN2 200 aa13.66□□□□□ -0.22
PTPRK-208ENST00000392449 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.66□□□□□ -0.22
PTPRK-208ENST00000392449 SCCPDHQ8NBX0 429 aa13.66□□□□□ -0.22
PTPRK-208ENST00000392449 CSNK2A3Q8NEV1 391 aa13.66□□□□□ -0.22
PTPRK-208ENST00000392449 WFDC12Q8WWY7 111 aa13.66□□□□□ -0.22
PTPRK-208ENST00000392449 PIGCQ92535 297 aa13.66□□□□□ -0.22
PTPRK-208ENST00000392449 PKP2Q99959 881 aa13.66□□□□□ -0.22
PTPRK-208ENST00000392449 MICU1Q9BPX6 476 aa13.66□□□□□ -0.22
PTPRK-208ENST00000392449 TTTY10Q9BZA0 68 aa13.66□□□□□ -0.22
PTPRK-208ENST00000392449 CNTD2Q9H8S5 307 aa13.66□□□□□ -0.22
PTPRK-208ENST00000392449 SP140LQ9H930 580 aa13.66□□□□□ -0.22
PTPRK-208ENST00000392449 SIRT7Q9NRC8 400 aa13.66□□□□□ -0.22
PTPRK-208ENST00000392449 LRP12Q9Y561 859 aa13.66□□□□□ -0.22
PTPRK-208ENST00000392449 A0A1W2PRD5 423 aa13.65□□□□□ -0.22
PTPRK-208ENST00000392449 A0A1W2PRF3 423 aa13.65□□□□□ -0.22
PTPRK-208ENST00000392449 A0A1W2PRM7 423 aa13.65□□□□□ -0.22
PTPRK-208ENST00000392449 PRR32B1ATL7 298 aa13.65□□□□□ -0.22
PTPRK-208ENST00000392449 AKR7A2O43488 359 aa13.65□□□□□ -0.22
PTPRK-208ENST00000392449 E2F6O75461 281 aa13.65□□□□□ -0.22
PTPRK-208ENST00000392449 TIPRLO75663 272 aa13.65□□□□□ -0.22
PTPRK-208ENST00000392449 KNG1P01042 644 aa13.65□□□□□ -0.22
PTPRK-208ENST00000392449 APOC1P02654 83 aa13.65□□□□□ -0.22
PTPRK-208ENST00000392449 CRYBA1P05813 215 aa13.65□□□□□ -0.22
PTPRK-208ENST00000392449 OSMP13725 252 aa13.65□□□□□ -0.22
PTPRK-208ENST00000392449 SLC2A5P22732 501 aa13.65□□□□□ -0.22
PTPRK-208ENST00000392449 CFL1P23528 166 aaKnown RBP13.65□□□□□ -0.22
PTPRK-208ENST00000392449 RPS7P62081 194 aaKnown RBP13.65□□□□□ -0.22
PTPRK-208ENST00000392449 CDK5Q00535 292 aa13.65□□□□□ -0.22
PTPRK-208ENST00000392449 KLRD1Q13241 179 aa13.65□□□□□ -0.22
PTPRK-208ENST00000392449 CDONQ4KMG0 1287 aa13.65□□□□□ -0.22
PTPRK-208ENST00000392449 KCTD8Q6ZWB6 473 aa13.65□□□□□ -0.22
PTPRK-208ENST00000392449 GALNT4Q8N4A0 578 aa13.65□□□□□ -0.22
PTPRK-208ENST00000392449 LY6G5BQ8NDX9 201 aa13.65□□□□□ -0.22
PTPRK-208ENST00000392449 OR5P3Q8WZ94 311 aa13.65□□□□□ -0.22
PTPRK-208ENST00000392449 RTL8AQ9BWD3 113 aa13.65□□□□□ -0.22
PTPRK-208ENST00000392449 SLITRK2Q9H156 845 aa13.65□□□□□ -0.22
PTPRK-208ENST00000392449 ANXA2P2A6NMY6 339 aa13.64□□□□□ -0.23
PTPRK-208ENST00000392449 ECDO95905 644 aaPredicted RBP13.64□□□□□ -0.23
PTPRK-208ENST00000392449 MRPL3P09001 348 aaKnown RBP13.64□□□□□ -0.23
PTPRK-208ENST00000392449 KRTAP10-3P60369 221 aa13.64□□□□□ -0.23
PTPRK-208ENST00000392449 PSMA6P60900 246 aaKnown RBP13.64□□□□□ -0.23
PTPRK-208ENST00000392449 IL5RAQ01344 420 aa13.64□□□□□ -0.23
PTPRK-208ENST00000392449 RHOUQ7L0Q8 258 aa13.64□□□□□ -0.23
PTPRK-208ENST00000392449 SLC36A1Q7Z2H8 476 aa13.64□□□□□ -0.23
PTPRK-208ENST00000392449 PNKDQ8N490 385 aa13.64□□□□□ -0.23
PTPRK-208ENST00000392449 SSMEM1Q8WWF3 244 aa13.64□□□□□ -0.23
PTPRK-208ENST00000392449 H1FXQ92522 213 aaKnown RBP13.64□□□□□ -0.23
PTPRK-208ENST00000392449 RNF170Q96K19 258 aa13.64□□□□□ -0.23
PTPRK-208ENST00000392449 FAM71F1Q96KD3 344 aaPredicted RBP13.64□□□□□ -0.23
PTPRK-208ENST00000392449 RGCCQ9H4X1 137 aa13.64□□□□□ -0.23
PTPRK-208ENST00000392449 HAO2Q9NYQ3 351 aa13.64□□□□□ -0.23
PTPRK-208ENST00000392449 ZNF391Q9UJN7 358 aa13.64□□□□□ -0.23
PTPRK-208ENST00000392449 MMP24Q9Y5R2 645 aa13.64□□□□□ -0.23
PTPRK-208ENST00000392449 AQP12BA6NM10 295 aa13.63□□□□□ -0.23
PTPRK-208ENST00000392449 PRODHO43272 600 aa13.63□□□□□ -0.23
PTPRK-208ENST00000392449 NDUFB3O43676 98 aa13.63□□□□□ -0.23
PTPRK-208ENST00000392449 GPR137BO60478 399 aa13.63□□□□□ -0.23
PTPRK-208ENST00000392449 RHBDL1O75783 438 aa13.63□□□□□ -0.23
PTPRK-208ENST00000392449 GPM6AP51674 278 aa13.63□□□□□ -0.23
PTPRK-208ENST00000392449 APOFQ13790 326 aa13.63□□□□□ -0.23
PTPRK-208ENST00000392449 GK3PQ14409 553 aa13.63□□□□□ -0.23
PTPRK-208ENST00000392449 DGUOKQ16854 277 aa13.63□□□□□ -0.23
PTPRK-208ENST00000392449 CEP78Q5JTW2 689 aa13.63□□□□□ -0.23
PTPRK-208ENST00000392449 SPATA24Q86W54 205 aa13.63□□□□□ -0.23
PTPRK-208ENST00000392449 AQP12AQ8IXF9 295 aa13.63□□□□□ -0.23
PTPRK-208ENST00000392449 TMEM86BQ8N661 226 aa13.63□□□□□ -0.23
PTPRK-208ENST00000392449 Q8N7P7 452 aa13.63□□□□□ -0.23
PTPRK-208ENST00000392449 ZNF454Q8N9F8 522 aa13.63□□□□□ -0.23
PTPRK-208ENST00000392449 OR4F5Q8NH21 305 aa13.63□□□□□ -0.23
PTPRK-208ENST00000392449 GAFA1Q96PS6 74 aa13.63□□□□□ -0.23
PTPRK-208ENST00000392449 RAB3IPQ96QF0 476 aaPredicted RBP13.63□□□□□ -0.23
PTPRK-208ENST00000392449 C1orf21Q9H246 121 aa13.63□□□□□ -0.23
PTPRK-208ENST00000392449 ZNF556Q9HAH1 456 aa13.63□□□□□ -0.23
PTPRK-208ENST00000392449 ELL3Q9HB65 397 aaPredicted RBP13.63□□□□□ -0.23
PTPRK-208ENST00000392449 BEX1Q9HBH7 125 aa13.63□□□□□ -0.23
PTPRK-208ENST00000392449 LAMP5Q9UJQ1 280 aa13.63□□□□□ -0.23
PTPRK-208ENST00000392449 MPC1Q9Y5U8 109 aa13.63□□□□□ -0.23
PTPRK-208ENST00000392449 KPTNQ9Y664 436 aa13.63□□□□□ -0.23
PTPRK-208ENST00000392449 POMT1Q9Y6A1 747 aa13.63□□□□□ -0.23
PTPRK-208ENST00000392449 VWFP04275 2813 aa13.63□□□□□ -0.23
PTPRK-208ENST00000392449 RNASEK-C17orf49H0YIS7 233 aa13.62□□□□□ -0.23
PTPRK-208ENST00000392449 M0R129 80 aa13.62□□□□□ -0.23
PTPRK-208ENST00000392449 CST4P01036 141 aa13.62□□□□□ -0.23
PTPRK-208ENST00000392449 ALOX5APP20292 161 aa13.62□□□□□ -0.23
PTPRK-208ENST00000392449 DCTDP32321 178 aa13.62□□□□□ -0.23
PTPRK-208ENST00000392449 IER3P46695 156 aa13.62□□□□□ -0.23
PTPRK-208ENST00000392449 TGM4P49221 684 aa13.62□□□□□ -0.23
PTPRK-208ENST00000392449 CBX1P83916 185 aa13.62□□□□□ -0.23
PTPRK-208ENST00000392449 OLFML2AQ68BL7 652 aa13.62□□□□□ -0.23
PTPRK-208ENST00000392449 KRT77Q7Z794 578 aa13.62□□□□□ -0.23
PTPRK-208ENST00000392449 FTMTQ8N4E7 242 aa13.62□□□□□ -0.23
PTPRK-208ENST00000392449 PPP1R14AQ96A00 147 aa13.62□□□□□ -0.23
PTPRK-208ENST00000392449 C12orf43Q96C57 262 aaKnown RBP13.62□□□□□ -0.23
PTPRK-208ENST00000392449 DCTN5Q9BTE1 182 aa13.62□□□□□ -0.23
PTPRK-208ENST00000392449 A0A1B0GVI7 797 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms