RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 TEX29Q8N6K0 151 aa16.12■□□□□ 0.17
SYNE4-202ENST00000340477 CCDC54Q8NEL0 328 aa16.12■□□□□ 0.17
SYNE4-202ENST00000340477 OR4M2Q8NGB6 313 aa16.12■□□□□ 0.17
SYNE4-202ENST00000340477 ITPKCQ96DU7 683 aa16.12■□□□□ 0.17
SYNE4-202ENST00000340477 INPP5EQ9NRR6 644 aa16.12■□□□□ 0.17
SYNE4-202ENST00000340477 ACOXLQ9NUZ1 547 aa16.12■□□□□ 0.17
SYNE4-202ENST00000340477 MIOXQ9UGB7 285 aa16.12■□□□□ 0.17
SYNE4-202ENST00000340477 EXOGQ9Y2C4 368 aaKnown RBP16.12■□□□□ 0.17
SYNE4-202ENST00000340477 CEACAM18A8MTB9 384 aa16.11■□□□□ 0.17
SYNE4-202ENST00000340477 P2RY10O00398 339 aa16.11■□□□□ 0.17
SYNE4-202ENST00000340477 IGLV3-1P01715 115 aa16.11■□□□□ 0.17
SYNE4-202ENST00000340477 UBCP0CG48 685 aaKnown RBP16.11■□□□□ 0.17
SYNE4-202ENST00000340477 PMELP40967 661 aa16.11■□□□□ 0.17
SYNE4-202ENST00000340477 ZNF404Q494X3 552 aa16.11■□□□□ 0.17
SYNE4-202ENST00000340477 CDONQ4KMG0 1287 aa16.11■□□□□ 0.17
SYNE4-202ENST00000340477 ZNF684Q5T5D7 378 aa16.11■□□□□ 0.17
SYNE4-202ENST00000340477 PLCXD3Q63HM9 321 aa16.11■□□□□ 0.17
SYNE4-202ENST00000340477 CATSPERDQ86XM0 798 aa16.11■□□□□ 0.17
SYNE4-202ENST00000340477 OR1M1Q8NGA1 313 aa16.11■□□□□ 0.17
SYNE4-202ENST00000340477 OR8B3Q8NGG8 313 aa16.11■□□□□ 0.17
SYNE4-202ENST00000340477 OR5P3Q8WZ94 311 aa16.11■□□□□ 0.17
SYNE4-202ENST00000340477 RNF170Q96K19 258 aa16.11■□□□□ 0.17
SYNE4-202ENST00000340477 OR8B2Q96RD0 313 aa16.11■□□□□ 0.17
SYNE4-202ENST00000340477 LRCH1Q9Y2L9 728 aa16.11■□□□□ 0.17
SYNE4-202ENST00000340477 TRAV38-1A0A0B4J264 116 aa16.1■□□□□ 0.17
SYNE4-202ENST00000340477 DHRS7CA6NNS2 312 aa16.1■□□□□ 0.17
SYNE4-202ENST00000340477 J3QRE1 110 aa16.1■□□□□ 0.17
SYNE4-202ENST00000340477 LGALS8O00214 317 aa16.1■□□□□ 0.17
SYNE4-202ENST00000340477 DLGAP1O14490 977 aa16.1■□□□□ 0.17
SYNE4-202ENST00000340477 SYT7O43581 403 aa16.1■□□□□ 0.17
SYNE4-202ENST00000340477 PLPP2O43688 288 aa16.1■□□□□ 0.17
SYNE4-202ENST00000340477 IFNA2P01563 188 aa16.1■□□□□ 0.17
SYNE4-202ENST00000340477 HTR1AP08908 422 aa16.1■□□□□ 0.17
SYNE4-202ENST00000340477 FAHP16930 419 aa16.1■□□□□ 0.17
SYNE4-202ENST00000340477 ZNF12P17014 697 aa16.1■□□□□ 0.17
SYNE4-202ENST00000340477 SRD5A1P18405 259 aa16.1■□□□□ 0.17
SYNE4-202ENST00000340477 SRP14P37108 136 aaKnown RBP16.1■□□□□ 0.17
SYNE4-202ENST00000340477 SLC34A1Q06495 639 aa16.1■□□□□ 0.17
SYNE4-202ENST00000340477 ODF4Q2M2E3 257 aa16.1■□□□□ 0.17
SYNE4-202ENST00000340477 DCDC5Q6ZRR9 648 aa16.1■□□□□ 0.17
SYNE4-202ENST00000340477 RORBQ92753 470 aa16.1■□□□□ 0.17
SYNE4-202ENST00000340477 PPP1R14AQ96A00 147 aa16.1■□□□□ 0.17
SYNE4-202ENST00000340477 NEIL1Q96FI4 390 aaPredicted RBP16.1■□□□□ 0.17
SYNE4-202ENST00000340477 TMEM246Q9BRR3 403 aa16.1■□□□□ 0.17
SYNE4-202ENST00000340477 ALG8Q9BVK2 526 aa16.1■□□□□ 0.17
SYNE4-202ENST00000340477 RNPEPL1Q9HAU8 725 aa16.1■□□□□ 0.17
SYNE4-202ENST00000340477 TMEM165Q9HC07 324 aa16.1■□□□□ 0.17
SYNE4-202ENST00000340477 AMBNQ9NP70 447 aa16.1■□□□□ 0.17
SYNE4-202ENST00000340477 OR5V1Q9UGF6 321 aa16.1■□□□□ 0.17
SYNE4-202ENST00000340477 SLC22A13Q9Y226 551 aa16.1■□□□□ 0.17
SYNE4-202ENST00000340477 OR5B21A6NL26 309 aa16.09■□□□□ 0.17
SYNE4-202ENST00000340477 FAM157CP0CG43 387 aa16.09■□□□□ 0.17
SYNE4-202ENST00000340477 GATA3P23771 443 aa16.09■□□□□ 0.17
SYNE4-202ENST00000340477 CD80P33681 288 aa16.09■□□□□ 0.17
SYNE4-202ENST00000340477 CAPGP40121 348 aa16.09■□□□□ 0.17
SYNE4-202ENST00000340477 GNG3P63215 75 aa16.09■□□□□ 0.17
SYNE4-202ENST00000340477 LCN2P80188 198 aa16.09■□□□□ 0.17
SYNE4-202ENST00000340477 ZNF154Q13106 437 aa16.09■□□□□ 0.17
SYNE4-202ENST00000340477 GALEQ14376 348 aa16.09■□□□□ 0.17
SYNE4-202ENST00000340477 CEACAM21Q3KPI0 293 aa16.09■□□□□ 0.17
SYNE4-202ENST00000340477 CEP78Q5JTW2 689 aa16.09■□□□□ 0.17
SYNE4-202ENST00000340477 FAM201AQ5SY85 155 aa16.09■□□□□ 0.17
SYNE4-202ENST00000340477 CLVS2Q5SYC1 327 aa16.09■□□□□ 0.17
SYNE4-202ENST00000340477 DCAF12L2Q5VW00 463 aa16.09■□□□□ 0.17
SYNE4-202ENST00000340477 FAHD2BQ6P2I3 314 aaPredicted RBP16.09■□□□□ 0.17
SYNE4-202ENST00000340477 ZNF826PQ6ZT77 177 aa16.09■□□□□ 0.17
SYNE4-202ENST00000340477 MOB3CQ70IA8 216 aa16.09■□□□□ 0.17
SYNE4-202ENST00000340477 C8orf59Q8N0T1 100 aaPredicted RBP16.09■□□□□ 0.17
SYNE4-202ENST00000340477 DEFB108BQ8NET1 73 aa16.09■□□□□ 0.17
SYNE4-202ENST00000340477 LRRC29Q8WV35 223 aa16.09■□□□□ 0.17
SYNE4-202ENST00000340477 APH1BQ8WW43 257 aa16.09■□□□□ 0.17
SYNE4-202ENST00000340477 FAHD2AQ96GK7 314 aa16.09■□□□□ 0.17
SYNE4-202ENST00000340477 HSPE1-MOB4S4R3N1 261 aa16.09■□□□□ 0.17
SYNE4-202ENST00000340477 OOEPA6NGQ2 149 aa16.08■□□□□ 0.16
SYNE4-202ENST00000340477 F5H0A9 414 aaPredicted RBP16.08■□□□□ 0.16
SYNE4-202ENST00000340477 C3orf80F5H4A9 247 aa16.08■□□□□ 0.16
SYNE4-202ENST00000340477 H0YAE9 185 aa16.08■□□□□ 0.16
SYNE4-202ENST00000340477 J3QLI3 93 aa16.08■□□□□ 0.16
SYNE4-202ENST00000340477 J3QLW9 94 aa16.08■□□□□ 0.16
SYNE4-202ENST00000340477 NDUFA2O43678 99 aa16.08■□□□□ 0.16
SYNE4-202ENST00000340477 CLIC3O95833 236 aa16.08■□□□□ 0.16
SYNE4-202ENST00000340477 NRASP01111 189 aa16.08■□□□□ 0.16
SYNE4-202ENST00000340477 ZNF19P17023 458 aa16.08■□□□□ 0.16
SYNE4-202ENST00000340477 RBMXP38159 391 aaKnown RBP16.08■□□□□ 0.16
SYNE4-202ENST00000340477 PSMB10P40306 273 aa16.08■□□□□ 0.16
SYNE4-202ENST00000340477 GPM6AP51674 278 aa16.08■□□□□ 0.16
SYNE4-202ENST00000340477 ISL1P61371 349 aa16.08■□□□□ 0.16
SYNE4-202ENST00000340477 GNB2P62879 340 aa16.08■□□□□ 0.16
SYNE4-202ENST00000340477 CSNK2BP67870 215 aa16.08■□□□□ 0.16
SYNE4-202ENST00000340477 MRPL28Q13084 256 aaKnown RBP16.08■□□□□ 0.16
SYNE4-202ENST00000340477 SCGB2A2Q13296 93 aa16.08■□□□□ 0.16
SYNE4-202ENST00000340477 MED21Q13503 144 aa16.08■□□□□ 0.16
SYNE4-202ENST00000340477 WDR38Q5JTN6 314 aa16.08■□□□□ 0.16
SYNE4-202ENST00000340477 WDR86Q86TI4 376 aa16.08■□□□□ 0.16
SYNE4-202ENST00000340477 EGFL6Q8IUX8 553 aa16.08■□□□□ 0.16
SYNE4-202ENST00000340477 OR5A2Q8NGI9 324 aa16.08■□□□□ 0.16
SYNE4-202ENST00000340477 HAVCR2Q8TDQ0 301 aa16.08■□□□□ 0.16
SYNE4-202ENST00000340477 C4orf36Q96KX1 117 aa16.08■□□□□ 0.16
SYNE4-202ENST00000340477 SSBP3Q9BWW4 388 aaPredicted RBP16.08■□□□□ 0.16
SYNE4-202ENST00000340477 VCX3BQ9H321 246 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms