RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 FKRPQ9H9S5 495 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 COL4A5P29400 1685 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 ELOA3CA0A087WX78 387 aaPredicted RBP14.43□□□□□ -0.1
NPHP3-201ENST00000337331 ZFP92A6NM28 416 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 COLCA2A8K830 154 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 HSF1Q00613 529 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 RAB31Q13636 194 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 IQCJQ1A5X6 159 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 OR4N2Q8NGD1 307 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 OR5L1Q8NGL2 311 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 GPR119Q8TDV5 335 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 ABHD5Q8WTS1 349 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 MED29Q9NX70 200 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 PIKFYVEQ9Y2I7 2098 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 GPANK1O95872 356 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 CRHP06850 196 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 RAB32Q13637 225 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 SHHQ15465 462 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 PHLDA2Q53GA4 152 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 LILRA6Q6PI73 481 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 FJX1Q86VR8 437 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 MORN4Q8NDC4 146 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 OR2G3Q8NGZ4 309 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 STT3BQ8TCJ2 826 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 CBLN4Q9NTU7 201 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 TMEM100Q9NV29 134 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 RPLP1P05386 114 aaKnown RBP14.43□□□□□ -0.1
NPHP3-201ENST00000337331 PMS2P11Q13670 270 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 ZNF66Q6ZN08 573 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 RNF165Q6ZSG1 346 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 C17orf78Q8N4C9 275 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 LFNGQ8NES3 379 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 OR8U1Q8NH10 309 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 OR51E1Q8TCB6 317 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 EDAQ92838 391 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 SARGQ9BW04 601 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 GPR87Q9BY21 358 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 GPR173Q9NS66 373 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 A0A1W2PNR3 127 aa14.42□□□□□ -0.1
NPHP3-201ENST00000337331 C9orf170A2RU37 121 aa14.42□□□□□ -0.1
NPHP3-201ENST00000337331 H2AFB1P0C5Y9 115 aa14.42□□□□□ -0.1
NPHP3-201ENST00000337331 ALOX5APP20292 161 aa14.42□□□□□ -0.1
NPHP3-201ENST00000337331 PYY3Q5JQD4 70 aa14.42□□□□□ -0.1
NPHP3-201ENST00000337331 ZNF429Q86V71 674 aa14.42□□□□□ -0.1
NPHP3-201ENST00000337331 EXTL1Q92935 676 aa14.42□□□□□ -0.1
NPHP3-201ENST00000337331 OBP2BQ9NPH6 170 aa14.42□□□□□ -0.1
NPHP3-201ENST00000337331 PRR13Q9NZ81 148 aa14.42□□□□□ -0.1
NPHP3-201ENST00000337331 SSC5DA1L4H1 1573 aa14.42□□□□□ -0.1
NPHP3-201ENST00000337331 HIST1H1BP16401 226 aaKnown RBP14.42□□□□□ -0.1
NPHP3-201ENST00000337331 GFERP55789 205 aa14.42□□□□□ -0.1
NPHP3-201ENST00000337331 MLF2Q15773 248 aaPredicted RBP14.42□□□□□ -0.1
NPHP3-201ENST00000337331 EMC4Q5J8M3 183 aa14.42□□□□□ -0.1
NPHP3-201ENST00000337331 SUMF1Q8NBK3 374 aa14.42□□□□□ -0.1
NPHP3-201ENST00000337331 LIPHQ8WWY8 451 aa14.42□□□□□ -0.1
NPHP3-201ENST00000337331 LIN37Q96GY3 246 aaPredicted RBP14.42□□□□□ -0.1
NPHP3-201ENST00000337331 SERGEFQ9UGK8 458 aa14.42□□□□□ -0.1
NPHP3-201ENST00000337331 LAMP3Q9UQV4 416 aa14.42□□□□□ -0.1
NPHP3-201ENST00000337331 SLC17A4Q9Y2C5 497 aa14.42□□□□□ -0.1
NPHP3-201ENST00000337331 PHF1O43189 567 aaPredicted RBP14.42□□□□□ -0.1
NPHP3-201ENST00000337331 MST1P26927 711 aa14.42□□□□□ -0.1
NPHP3-201ENST00000337331 MRPS34P82930 218 aaKnown RBP14.42□□□□□ -0.1
NPHP3-201ENST00000337331 SPNS3Q6ZMD2 512 aa14.42□□□□□ -0.1
NPHP3-201ENST00000337331 FGF14Q92915 247 aa14.42□□□□□ -0.1
NPHP3-201ENST00000337331 SLAMF6Q96DU3 332 aa14.42□□□□□ -0.1
NPHP3-201ENST00000337331 ZNF576Q9H609 170 aa14.42□□□□□ -0.1
NPHP3-201ENST00000337331 MBD1Q9UIS9 605 aaPredicted RBP14.42□□□□□ -0.1
NPHP3-201ENST00000337331 RAB27BO00194 218 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 ACKR3P25106 362 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 CARD18P57730 90 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 TLE4Q04727 773 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 AADACL3Q5VUY0 350 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 RPS19BP1Q86WX3 136 aaKnown RBP14.41□□□□□ -0.1
NPHP3-201ENST00000337331 PRSS35Q8N3Z0 413 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 LINC01555Q8NAE3 123 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 RBMXL1Q96E39 390 aaKnown RBP14.41□□□□□ -0.1
NPHP3-201ENST00000337331 SCN4AP35499 1836 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 KIAA1217Q5T5P2 1943 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 A0A1B0GTH9 108 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 CEBPZOSA8MTT3 80 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 CST4P01036 141 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 RCC1P18754 421 aaPredicted RBP14.41□□□□□ -0.1
NPHP3-201ENST00000337331 DHODHQ02127 395 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 ZNF85Q03923 595 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 DBX2Q6ZNG2 339 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 ZFP62Q8NB50 900 aaPredicted RBP14.41□□□□□ -0.1
NPHP3-201ENST00000337331 DMRTA2Q96SC8 542 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 TRAPPC2LQ9UL33 140 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 SIAH2O43255 324 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 CTAG2O75638 210 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 SNRPCP09234 159 aaKnown RBP14.41□□□□□ -0.1
NPHP3-201ENST00000337331 APOBEC1P41238 236 aaKnown RBP14.41□□□□□ -0.1
NPHP3-201ENST00000337331 MAML2Q8IZL2 1156 aaPredicted RBP14.41□□□□□ -0.1
NPHP3-201ENST00000337331 ADGRL4Q9HBW9 690 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 C19orf12Q9NSK7 152 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 LHX6Q9UPM6 363 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 SIGLEC7Q9Y286 467 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 LOC102724200A0A096LPH7 203 aaPredicted RBP14.41□□□□□ -0.1
NPHP3-201ENST00000337331 A0A1W2PPV4 95 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 PLRG1O43660 514 aaKnown RBP14.41□□□□□ -0.1
NPHP3-201ENST00000337331 IGHV3-9P01782 118 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms