RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 PYY3Q5JQD4 70 aa12.99□□□□□ -0.33
COL6A2-201ENST00000300527 PLXDC2Q6UX71 529 aa12.99□□□□□ -0.33
COL6A2-201ENST00000300527 SSX9Q7RTT3 188 aa12.99□□□□□ -0.33
COL6A2-201ENST00000300527 NUP54Q7Z3B4 507 aa12.99□□□□□ -0.33
COL6A2-201ENST00000300527 WDFY1Q8IWB7 410 aa12.99□□□□□ -0.33
COL6A2-201ENST00000300527 SUMF2Q8NBJ7 301 aa12.99□□□□□ -0.33
COL6A2-201ENST00000300527 ZNF296Q8WUU4 475 aaPredicted RBP12.99□□□□□ -0.33
COL6A2-201ENST00000300527 ZNF107Q9UII5 783 aaPredicted RBP12.99□□□□□ -0.33
COL6A2-201ENST00000300527 WDR87Q6ZQQ6 2873 aa12.99□□□□□ -0.33
COL6A2-201ENST00000300527 JTBO76095 146 aa12.99□□□□□ -0.33
COL6A2-201ENST00000300527 CCL5P13501 91 aa12.99□□□□□ -0.33
COL6A2-201ENST00000300527 PTGER4P35408 488 aa12.99□□□□□ -0.33
COL6A2-201ENST00000300527 RAP1AP62834 184 aa12.99□□□□□ -0.33
COL6A2-201ENST00000300527 HAGHQ16775 308 aa12.99□□□□□ -0.33
COL6A2-201ENST00000300527 CAPNS2Q96L46 248 aa12.99□□□□□ -0.33
COL6A2-201ENST00000300527 HDHD3Q9BSH5 251 aaPredicted RBP12.99□□□□□ -0.33
COL6A2-201ENST00000300527 KLF8O95600 359 aaPredicted RBP12.98□□□□□ -0.33
COL6A2-201ENST00000300527 PGCP20142 388 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 TMEM50BP56557 158 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 CPEB2Q7Z5Q1 589 aaKnown RBP12.98□□□□□ -0.33
COL6A2-201ENST00000300527 SULF2Q8IWU5 870 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 C19orf47Q8N9M1 422 aaKnown RBP12.98□□□□□ -0.33
COL6A2-201ENST00000300527 ZNF519Q8TB69 540 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 C11orf40Q8WZ69 217 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 ZNF2Q9BSG1 426 aaPredicted RBP12.98□□□□□ -0.33
COL6A2-201ENST00000300527 LUZP4Q9P127 313 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 KLK2P20151 261 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 FPR2P25090 351 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 GPX4P36969 197 aaPredicted RBP12.98□□□□□ -0.33
COL6A2-201ENST00000300527 SLC6A9P48067 706 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 SPEM2Q0P670 501 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 PHLDA2Q53GA4 152 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 SCGB3A2Q96PL1 93 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 C19orf12Q9NSK7 152 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 CDRT15L2A8MXV6 281 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 CDC14BO60729 498 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 RAMP1O60894 148 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 IL33O95760 270 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 SNCAP37840 140 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 ZNF84P51523 738 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 SLC26A5P58743 744 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 FUT7Q11130 342 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 GFI1BQ5VTD9 330 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 GGNBP1Q5YKI7 109 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 SUMF1Q8NBK3 374 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 OR13H1Q8NG92 308 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 OR1J1Q8NGS3 322 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 OR14K1Q8NGZ2 314 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 S100A13Q99584 98 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 GPR84Q9NQS5 396 aa12.98□□□□□ -0.33
COL6A2-201ENST00000300527 FAM221AA4D161 298 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 PLPP3O14495 311 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 GATCO43716 136 aaKnown RBP12.97□□□□□ -0.33
COL6A2-201ENST00000300527 BIDP55957 195 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 PRSS12P56730 875 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 FAM57BQ71RH2 274 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 ARRDC1Q8N5I2 433 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 ADAMTS18Q8TE60 1221 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 LIN37Q96GY3 246 aaPredicted RBP12.97□□□□□ -0.33
COL6A2-201ENST00000300527 SUCNR1Q9BXA5 334 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 BORCS7-ASMTA0A0B4J1R7 106 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 TAAR5O14804 337 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 NXPH3O95157 252 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 OPRM1P35372 400 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 TLE3Q04726 772 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 USF2Q15853 346 aaPredicted RBP12.97□□□□□ -0.33
COL6A2-201ENST00000300527 NSUN5P2Q63ZY6 315 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 SGPP2Q8IWX5 399 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 LIPHQ8WWY8 451 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 HOXB13Q92826 284 aaPredicted RBP12.97□□□□□ -0.33
COL6A2-201ENST00000300527 MR1Q95460 341 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 TGM7Q96PF1 710 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 DNAJB11Q9UBS4 358 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 IGHV2-5P01817 119 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 TAGLN2P37802 199 aaKnown RBP12.97□□□□□ -0.33
COL6A2-201ENST00000300527 RSU1Q15404 277 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 FNDC7Q5VTL7 733 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 Q7L0L9 218 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 C17orf78Q8N4C9 275 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 ZNF283Q8N7M2 679 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 URM1Q9BTM9 101 aaKnown RBP12.97□□□□□ -0.33
COL6A2-201ENST00000300527 C1orf123Q9NWV4 160 aa12.97□□□□□ -0.33
COL6A2-201ENST00000300527 GAR1Q9NY12 217 aaKnown RBP12.97□□□□□ -0.33
COL6A2-201ENST00000300527 PCNX3Q9H6A9 2034 aa12.96□□□□□ -0.33
COL6A2-201ENST00000300527 TMEM150CB9EJG8 249 aa12.96□□□□□ -0.33
COL6A2-201ENST00000300527 CD63P08962 238 aa12.96□□□□□ -0.33
COL6A2-201ENST00000300527 MDKP21741 143 aaPredicted RBP12.96□□□□□ -0.33
COL6A2-201ENST00000300527 CSNK1EP49674 416 aaKnown RBP12.96□□□□□ -0.33
COL6A2-201ENST00000300527 NHLH2Q02577 135 aa12.96□□□□□ -0.33
COL6A2-201ENST00000300527 HMGN3Q15651 99 aa12.96□□□□□ -0.33
COL6A2-201ENST00000300527 TMEM268Q5VZI3 342 aa12.96□□□□□ -0.33
COL6A2-201ENST00000300527 DNM1P34Q6PK57 102 aa12.96□□□□□ -0.33
COL6A2-201ENST00000300527 BRICD5Q6PL45 260 aa12.96□□□□□ -0.33
COL6A2-201ENST00000300527 ZFP62Q8NB50 900 aaPredicted RBP12.96□□□□□ -0.33
COL6A2-201ENST00000300527 OR56B1Q8NGI3 324 aa12.96□□□□□ -0.33
COL6A2-201ENST00000300527 KCNG3Q8TAE7 436 aa12.96□□□□□ -0.33
COL6A2-201ENST00000300527 DAZLQ92904 295 aaKnown RBP12.96□□□□□ -0.33
COL6A2-201ENST00000300527 INTS12Q96CB8 462 aaKnown RBP12.96□□□□□ -0.33
COL6A2-201ENST00000300527 NELFAQ9H3P2 528 aa12.96□□□□□ -0.33
COL6A2-201ENST00000300527 DOK5Q9P104 306 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms