RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 GALNTL5Q7Z4T8 443 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 TMED4Q7Z7H5 227 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 PIP4P1Q86T03 277 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 SKA3Q8IX90 412 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 FAM109AQ8N4B1 249 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 UXS1Q8NBZ7 420 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 MDS2Q8NDY4 140 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 STEAP2Q8NFT2 490 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 OR2AK2Q8NG84 335 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 OR51T1Q8NGJ9 327 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 OR5D18Q8NGL1 313 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 CHST6Q9GZX3 395 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 WNT5BQ9H1J7 359 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 SLC23A1Q9UHI7 598 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 A0A1W2PP11 408 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 OR14I1A6ND48 311 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 OR6C65A6NJZ3 312 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 G3V3Q6 166 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 SSX5O60225 188 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 SNAPC5O75971 98 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 OR4E1P0C645 316 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 NAT2P11245 290 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 TSPAN5P62079 268 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 RIPPLY1Q0D2K3 151 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 LGALSLQ3ZCW2 172 aaPredicted RBP11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 PLAC9Q5JTB6 97 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 TSPO2Q5TGU0 170 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 CRIP3Q6Q6R5 217 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 DTX1Q86Y01 620 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 OR2AE1Q8NHA4 323 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 SNAPC3Q92966 411 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 PIGTQ969N2 578 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 CPNE2Q96FN4 548 aaPredicted RBP11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 PRRG4Q9BZD6 226 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 RGCCQ9H4X1 137 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 MED13Q9UHV7 2174 aa11.29□□□□□ -0.6
SPTLC1-201ENST00000262554 H3BUI4 141 aa11.28□□□□□ -0.6
SPTLC1-201ENST00000262554 GOSR2O14653 212 aa11.28□□□□□ -0.6
SPTLC1-201ENST00000262554 IGHV3-9P01782 118 aa11.28□□□□□ -0.6
SPTLC1-201ENST00000262554 IFNA6P05013 189 aa11.28□□□□□ -0.6
SPTLC1-201ENST00000262554 MGMTP16455 207 aa11.28□□□□□ -0.6
SPTLC1-201ENST00000262554 HRH1P35367 487 aa11.28□□□□□ -0.6
SPTLC1-201ENST00000262554 ZNF81P51508 661 aa11.28□□□□□ -0.6
SPTLC1-201ENST00000262554 PER3P56645 1201 aa11.28□□□□□ -0.6
SPTLC1-201ENST00000262554 PPIAP62937 165 aaKnown RBP11.28□□□□□ -0.6
SPTLC1-201ENST00000262554 HGFACQ04756 655 aa11.28□□□□□ -0.6
SPTLC1-201ENST00000262554 CNN3Q15417 329 aaKnown RBP11.28□□□□□ -0.6
SPTLC1-201ENST00000262554 MPPED2Q15777 294 aa11.28□□□□□ -0.6
SPTLC1-201ENST00000262554 STK11Q15831 433 aa11.28□□□□□ -0.6
SPTLC1-201ENST00000262554 RSPO4Q2I0M5 234 aaPredicted RBP11.28□□□□□ -0.6
SPTLC1-201ENST00000262554 ATPAF1Q5TC12 328 aaPredicted RBP11.28□□□□□ -0.6
SPTLC1-201ENST00000262554 TUSC5Q8IXB3 177 aa11.28□□□□□ -0.6
SPTLC1-201ENST00000262554 FTMTQ8N4E7 242 aa11.28□□□□□ -0.6
SPTLC1-201ENST00000262554 FAM89BQ8N5H3 189 aa11.28□□□□□ -0.6
SPTLC1-201ENST00000262554 OR8H1Q8NGG4 311 aa11.28□□□□□ -0.6
SPTLC1-201ENST00000262554 OR13C8Q8NGS7 320 aa11.28□□□□□ -0.6
SPTLC1-201ENST00000262554 ASB13Q8WXK3 278 aa11.28□□□□□ -0.6
SPTLC1-201ENST00000262554 SPSB1Q96BD6 273 aa11.28□□□□□ -0.6
SPTLC1-201ENST00000262554 GPR173Q9NS66 373 aa11.28□□□□□ -0.6
SPTLC1-201ENST00000262554 MYO7BQ6PIF6 2116 aa11.28□□□□□ -0.6
SPTLC1-201ENST00000262554 ZNF724A8MTY0 619 aa11.27□□□□□ -0.6
SPTLC1-201ENST00000262554 ZNF587BE7ETH6 402 aa11.27□□□□□ -0.6
SPTLC1-201ENST00000262554 F5H5P2 479 aa11.27□□□□□ -0.6
SPTLC1-201ENST00000262554 SERPINA2P20848 420 aa11.27□□□□□ -0.6
SPTLC1-201ENST00000262554 C4BPBP20851 252 aa11.27□□□□□ -0.6
SPTLC1-201ENST00000262554 PRKACBP22694 351 aa11.27□□□□□ -0.6
SPTLC1-201ENST00000262554 ACKR3P25106 362 aa11.27□□□□□ -0.6
SPTLC1-201ENST00000262554 HTR2BP41595 481 aa11.27□□□□□ -0.6
SPTLC1-201ENST00000262554 CBX5P45973 191 aa11.27□□□□□ -0.6
SPTLC1-201ENST00000262554 TMEM50BP56557 158 aa11.27□□□□□ -0.6
SPTLC1-201ENST00000262554 UBE2MP61081 183 aaKnown RBP11.27□□□□□ -0.6
SPTLC1-201ENST00000262554 ARFRP1Q13795 201 aa11.27□□□□□ -0.6
SPTLC1-201ENST00000262554 ACTBL2Q562R1 376 aa11.27□□□□□ -0.6
SPTLC1-201ENST00000262554 C11orf88Q6PI97 169 aa11.27□□□□□ -0.6
SPTLC1-201ENST00000262554 C1QL2Q7Z5L3 287 aa11.27□□□□□ -0.6
SPTLC1-201ENST00000262554 ZDHHC22Q8N966 263 aa11.27□□□□□ -0.6
SPTLC1-201ENST00000262554 OR4K15Q8NH41 348 aa11.27□□□□□ -0.6
SPTLC1-201ENST00000262554 FGFBP3Q8TAT2 258 aa11.27□□□□□ -0.6
SPTLC1-201ENST00000262554 ARHGAP5-AS1Q96IT6 56 aa11.27□□□□□ -0.6
SPTLC1-201ENST00000262554 RNF122Q9H9V4 155 aa11.27□□□□□ -0.6
SPTLC1-201ENST00000262554 CALHM2Q9HA72 323 aa11.27□□□□□ -0.6
SPTLC1-201ENST00000262554 ELL3Q9HB65 397 aaPredicted RBP11.27□□□□□ -0.6
SPTLC1-201ENST00000262554 TMEM165Q9HC07 324 aa11.27□□□□□ -0.6
SPTLC1-201ENST00000262554 SLC7A10Q9NS82 523 aa11.27□□□□□ -0.6
SPTLC1-201ENST00000262554 ARGFXA6NJG6 315 aa11.27□□□□□ -0.61
SPTLC1-201ENST00000262554 RPL36A-HNRNPH2H7BZ11 118 aa11.27□□□□□ -0.61
SPTLC1-201ENST00000262554 MFNGO00587 321 aa11.27□□□□□ -0.61
SPTLC1-201ENST00000262554 ACTL6AO96019 429 aa11.27□□□□□ -0.61
SPTLC1-201ENST00000262554 MMP7P09237 267 aaPredicted RBP11.27□□□□□ -0.61
SPTLC1-201ENST00000262554 NAT1P18440 290 aa11.27□□□□□ -0.61
SPTLC1-201ENST00000262554 RRADP55042 308 aa11.27□□□□□ -0.61
SPTLC1-201ENST00000262554 MTCP1P56278 107 aa11.27□□□□□ -0.61
SPTLC1-201ENST00000262554 ARF1P84077 181 aaKnown RBP11.27□□□□□ -0.61
SPTLC1-201ENST00000262554 DHODHQ02127 395 aa11.27□□□□□ -0.61
SPTLC1-201ENST00000262554 SLC10A1Q14973 349 aa11.27□□□□□ -0.61
SPTLC1-201ENST00000262554 ARL6IP1Q15041 203 aa11.27□□□□□ -0.61
SPTLC1-201ENST00000262554 PABPC1L2AQ5JQF8 200 aa11.27□□□□□ -0.61
SPTLC1-201ENST00000262554 ATP1A1-AS1Q5TC04 95 aa11.27□□□□□ -0.61
SPTLC1-201ENST00000262554 RTN4RL2Q86UN3 420 aa11.27□□□□□ -0.61
SPTLC1-201ENST00000262554 C12orf45Q8N5I9 185 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms