RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 SHROOM3Q8TF72 1996 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 DUS4LO95620 317 aaKnown RBP11.89□□□□□ -0.51
COL1A1-201ENST00000225964 FBP1P09467 338 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 SPNS3Q6ZMD2 512 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 GLCCI1Q86VQ1 547 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 OR4F17Q8NGA8 305 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 EXTL1Q92935 676 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 ADGRG7Q96K78 797 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 CHRDL1Q9BU40 450 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 CACFD1Q9UGQ2 172 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 H3BMH7 237 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 NME1P15531 152 aaKnown RBP11.89□□□□□ -0.51
COL1A1-201ENST00000225964 SRSF5Q13243 272 aaKnown RBP11.89□□□□□ -0.51
COL1A1-201ENST00000225964 FAM26EQ8N5C1 309 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 WNT16Q9UBV4 365 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 LRP12Q9Y561 859 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 IL5P05113 134 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 KLF3P57682 345 aaPredicted RBP11.89□□□□□ -0.51
COL1A1-201ENST00000225964 ACOT7LQ6ZUV0 252 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 OCIAD1Q9NX40 245 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 LSM2Q9Y333 95 aaKnown RBP11.89□□□□□ -0.51
COL1A1-201ENST00000225964 MTCH2Q9Y6C9 303 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 ZAR1LA6NP61 321 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 MS4A18H0YCH9 400 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 FCGR3BO75015 233 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 ENDOGQ14249 297 aaKnown RBP11.89□□□□□ -0.51
COL1A1-201ENST00000225964 MS4A18Q3C1V0 323 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 ABI3BPQ7Z7G0 1075 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 LRRTM1Q86UE6 522 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 ORAI1Q96D31 301 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 TAF1P21675 1872 aa11.89□□□□□ -0.51
COL1A1-201ENST00000225964 CCL2P13500 99 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 SOX8P57073 446 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 ERVFC1-1P60608 527 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 PPP1CAP62136 330 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 FABP9Q0Z7S8 132 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 BHLHA15Q7RTS1 189 aaPredicted RBP11.88□□□□□ -0.51
COL1A1-201ENST00000225964 BLNKQ8WV28 456 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 BCL2L2Q92843 193 aaPredicted RBP11.88□□□□□ -0.51
COL1A1-201ENST00000225964 VN1R1Q9GZP7 353 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 YBX2Q9Y2T7 364 aaKnown RBP11.88□□□□□ -0.51
COL1A1-201ENST00000225964 CD3DP04234 171 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 BTG1P62324 171 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 GNG3P63215 75 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 OR2F1Q13607 317 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 ZNF425Q6IV72 752 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 OR5AP2Q8NGF4 316 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 GRAMD2BQ96HH9 432 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 GPR87Q9BY21 358 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 SRRQ9GZT4 340 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 TCRBV5S1A1TA0A578 114 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 ZNF354AO60765 605 aaPredicted RBP11.88□□□□□ -0.51
COL1A1-201ENST00000225964 NGFP01138 241 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 CD3EP07766 207 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 OR4E1P0C645 316 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 PSMB6P28072 239 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 MPGP29372 298 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 TFF2Q03403 129 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 CTU2Q2VPK5 515 aaKnown RBP11.88□□□□□ -0.51
COL1A1-201ENST00000225964 OR2A1Q8NGT9 310 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 C2orf50Q96LR7 162 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 GABARAPL3Q9BY60 117 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 GABARAPL1Q9H0R8 117 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 TMPRSS5Q9H3S3 457 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 SLC25A37Q9NYZ2 338 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 IGHV3-43A0A0B4J1X8 118 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 GPANK1O95872 356 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 IGHV3-43DP0DP04 118 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 METAP1P53582 386 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 PPP1CBP62140 327 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 ZXDAP98168 799 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 FZD5Q13467 585 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 SPINK9Q5DT21 86 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 DHRS7BQ6IAN0 325 aaPredicted RBP11.88□□□□□ -0.51
COL1A1-201ENST00000225964 TP53I13Q8NBR0 393 aaPredicted RBP11.88□□□□□ -0.51
COL1A1-201ENST00000225964 CT55Q8WUE5 264 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 SLC25A19Q9HC21 320 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 BOLA1Q9Y3E2 137 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 IGHV5-51A0A0C4DH38 117 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 C3orf80F5H4A9 247 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 SLC25A5P05141 298 aaKnown RBP11.88□□□□□ -0.51
COL1A1-201ENST00000225964 FAM122BQ7Z309 247 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 Q8IYB0 196 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 OR5M8Q8NGP6 311 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 ZNF416Q9BWM5 594 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 PIGMQ9H3S5 423 aa11.88□□□□□ -0.51
COL1A1-201ENST00000225964 ZNF716A6NP11 495 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 H3BP45 60 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 CRXO43186 299 aaPredicted RBP11.87□□□□□ -0.51
COL1A1-201ENST00000225964 SULT1A3P0DMM9 295 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 SULT1A4P0DMN0 295 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 CDK5R1Q15078 307 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 LRRC29Q8WV35 223 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 TMED6Q8WW62 240 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 SMIM7Q9BQ49 75 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 ADGRL4Q9HBW9 690 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 FAM157AC9JC47 383 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 MBTPS2O43462 519 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 PCBP4P57723 403 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms