RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 TMEM38BQ9NVV0 291 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 ATPIF1Q9UII2 106 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 TRAPPC2LQ9UL33 140 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 CHCHD2Q9Y6H1 151 aaPredicted RBP4.89□□□□□ -1.63
CHD2-227ENST00000637572 ASCC3Q8N3C0 2202 aaKnown RBP4.89□□□□□ -1.63
CHD2-227ENST00000637572 BRCA2P51587 3418 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 TRAV6A0A075B6T7 132 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 DEGS1O15121 323 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 OGG1O15527 345 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 OIP5O43482 229 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 HPNP05981 417 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 GABRA2P47869 451 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 PNLIPRP3Q17RR3 467 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 SMIM21Q3B7S5 101 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 BHLHA15Q7RTS1 189 aaPredicted RBP4.89□□□□□ -1.63
CHD2-227ENST00000637572 SSX6Q7RTT6 188 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 CDH26Q8IXH8 852 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 ZNF441Q8N8Z8 693 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 ASCC1Q8N9N2 400 aaKnown RBP4.89□□□□□ -1.63
CHD2-227ENST00000637572 ACBD4Q8NC06 268 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 C1orf162Q8NEQ5 155 aaPredicted RBP4.89□□□□□ -1.63
CHD2-227ENST00000637572 OR4K15Q8NH41 348 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 OR51F2Q8NH61 342 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 CASTOR1Q8WTX7 329 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 HSD17B8Q92506 261 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 PIGTQ969N2 578 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 NKX3-1Q99801 234 aaPredicted RBP4.89□□□□□ -1.63
CHD2-227ENST00000637572 NAA50Q9GZZ1 169 aaKnown RBP4.89□□□□□ -1.63
CHD2-227ENST00000637572 KCNE5Q9UJ90 142 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 PCDHGA9Q9Y5G4 932 aaKnown RBP4.89□□□□□ -1.63
CHD2-227ENST00000637572 MRPS18BQ9Y676 258 aaKnown RBP4.89□□□□□ -1.63
CHD2-227ENST00000637572 LOC100509620A0A075B734 347 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 CENPVL1A0A0U1RR11 272 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 SERPINE3A8MV23 424 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 CYB5BO43169 146 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 IL7P13232 177 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 CD34P28906 385 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 CDAP32320 146 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 SNRPD2P62316 118 aaKnown RBP4.89□□□□□ -1.63
CHD2-227ENST00000637572 FABP5Q01469 135 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 FMODQ06828 376 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 NRN1LQ496H8 165 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 C1QL3Q5VWW1 255 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 TFAP2EQ6VUC0 442 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 KCTD9Q7L273 389 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 TUSC5Q8IXB3 177 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 ELMOD2Q8IZ81 293 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 FBXL14Q8N1E6 418 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 AKR7LQ8NHP1 331 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 DYNC2LI1Q8TCX1 351 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 FN3KRPQ9HA64 309 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 RBFOX1Q9NWB1 397 aaKnown RBP4.89□□□□□ -1.63
CHD2-227ENST00000637572 PTTG3PQ9NZH4 202 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 NLKQ9UBE8 527 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 HELZ2Q9BYK8 2649 aaKnown RBP4.89□□□□□ -1.63
CHD2-227ENST00000637572 TDRD6O60522 2096 aaKnown RBP4.88□□□□□ -1.63
CHD2-227ENST00000637572 TICRRQ7Z2Z1 1910 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 BORCS7-ASMTA0A0B4J1R7 106 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 KLF7O75840 302 aaPredicted RBP4.88□□□□□ -1.63
CHD2-227ENST00000637572 ACTL6BO94805 426 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 IFNA7P01567 189 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 ALDOBP05062 364 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 BMP5P22003 454 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 HCCSP53701 268 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 RPP30P78346 268 aaKnown RBP4.88□□□□□ -1.63
CHD2-227ENST00000637572 TGIF1Q15583 401 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 PAN3Q58A45 887 aaKnown RBP4.88□□□□□ -1.63
CHD2-227ENST00000637572 C6orf183Q5T699 404 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 ZNF468Q5VIY5 522 aaPredicted RBP4.88□□□□□ -1.63
CHD2-227ENST00000637572 CD163Q86VB7 1156 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 C17orf78Q8N4C9 275 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 BPIFB2Q8N4F0 458 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 BMPERQ8N8U9 685 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 FADS6Q8N9I5 356 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 GALNT11Q8NCW6 608 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 DNAAF1Q8NEP3 725 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 SLC26A10Q8NG04 563 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 APH1BQ8WW43 257 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 PTP4A1Q93096 173 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 SLAMF9Q96A28 289 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 KIRREL1Q96J84 757 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 OR2M2Q96R28 347 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 AIFM2Q9BRQ8 373 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 SFXN3Q9BWM7 321 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 CHST6Q9GZX3 395 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 GPR173Q9NS66 373 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 OR14J1Q9UGF5 321 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 CACFD1Q9UGQ2 172 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 C13orf42A0A1B0GVH6 325 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 C16orf97H3BN30 126 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 CDX4O14627 284 aaPredicted RBP4.88□□□□□ -1.63
CHD2-227ENST00000637572 CYTIPO60759 359 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 SC5DO75845 299 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 CNOT4O95628 575 aaKnown RBP4.88□□□□□ -1.63
CHD2-227ENST00000637572 CELA2AP08217 269 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 COX5BP10606 129 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 FPR2P25090 351 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 GDNFP39905 211 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 AKR1C2P52895 323 aa4.88□□□□□ -1.63
CHD2-227ENST00000637572 SEC61A1P61619 476 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms