RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 TSPO2Q5TGU0 170 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 TRAPPC6BQ86SZ2 158 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 NICN1Q9BSH3 213 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 TMEM59Q9BXS4 323 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 GON7Q9BXV9 100 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 LINC00470Q9BZP3 86 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 SELENOIQ9C0D9 397 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 OR2H1Q9GZK4 316 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 TINAGL1Q9GZM7 467 aaPredicted RBP15.85■□□□□ 0.13
SMPD3-211ENST00000568373 DLL4Q9NR61 685 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 MCTS1Q9ULC4 181 aaKnown RBP15.85■□□□□ 0.13
SMPD3-211ENST00000568373 DHRS7CA6NNS2 312 aa15.84■□□□□ 0.13
SMPD3-211ENST00000568373 M0QYG6 137 aa15.84■□□□□ 0.13
SMPD3-211ENST00000568373 RLN1P04808 185 aa15.84■□□□□ 0.13
SMPD3-211ENST00000568373 CD46P15529 392 aa15.84■□□□□ 0.13
SMPD3-211ENST00000568373 GNB3P16520 340 aa15.84■□□□□ 0.13
SMPD3-211ENST00000568373 PPIAP62937 165 aaKnown RBP15.84■□□□□ 0.13
SMPD3-211ENST00000568373 NDUFA5Q16718 116 aa15.84■□□□□ 0.13
SMPD3-211ENST00000568373 NRN1LQ496H8 165 aa15.84■□□□□ 0.13
SMPD3-211ENST00000568373 DMRTC1Q5HYR2 192 aa15.84■□□□□ 0.13
SMPD3-211ENST00000568373 CRIP3Q6Q6R5 217 aa15.84■□□□□ 0.13
SMPD3-211ENST00000568373 PLXDC2Q6UX71 529 aa15.84■□□□□ 0.13
SMPD3-211ENST00000568373 CHMP1BQ7LBR1 199 aa15.84■□□□□ 0.13
SMPD3-211ENST00000568373 SKA3Q8IX90 412 aa15.84■□□□□ 0.13
SMPD3-211ENST00000568373 C9orf62Q8N4C0 152 aa15.84■□□□□ 0.13
SMPD3-211ENST00000568373 WNT5BQ9H1J7 359 aa15.84■□□□□ 0.13
SMPD3-211ENST00000568373 PARPBPQ9NWS1 579 aa15.84■□□□□ 0.13
SMPD3-211ENST00000568373 HSPB11Q9Y547 144 aa15.84■□□□□ 0.13
SMPD3-211ENST00000568373 A0A0A6YYD4 124 aa15.83■□□□□ 0.13
SMPD3-211ENST00000568373 LRP3O75074 770 aa15.83■□□□□ 0.13
SMPD3-211ENST00000568373 IGHV3-9P01782 118 aa15.83■□□□□ 0.13
SMPD3-211ENST00000568373 AMY2AP04746 511 aa15.83■□□□□ 0.13
SMPD3-211ENST00000568373 ITGB2P05107 769 aa15.83■□□□□ 0.13
SMPD3-211ENST00000568373 PTGFRP43088 359 aa15.83■□□□□ 0.13
SMPD3-211ENST00000568373 ALDH3B1P43353 468 aa15.83■□□□□ 0.13
SMPD3-211ENST00000568373 FAM189A2Q15884 450 aa15.83■□□□□ 0.13
SMPD3-211ENST00000568373 SPICQ8N5J4 248 aa15.83■□□□□ 0.13
SMPD3-211ENST00000568373 ZFP62Q8NB50 900 aaPredicted RBP15.83■□□□□ 0.13
SMPD3-211ENST00000568373 FGFBP3Q8TAT2 258 aa15.83■□□□□ 0.13
SMPD3-211ENST00000568373 FNDC9Q8TBE3 224 aa15.83■□□□□ 0.13
SMPD3-211ENST00000568373 NPRL2Q8WTW4 380 aa15.83■□□□□ 0.13
SMPD3-211ENST00000568373 NUDCD2Q8WVJ2 157 aa15.83■□□□□ 0.13
SMPD3-211ENST00000568373 BANF2Q9H503 90 aa15.83■□□□□ 0.13
SMPD3-211ENST00000568373 GHRLQ9UBU3 117 aa15.83■□□□□ 0.13
SMPD3-211ENST00000568373 SCP2D1Q9UJQ7 156 aa15.83■□□□□ 0.13
SMPD3-211ENST00000568373 AKR7A2O43488 359 aa15.83■□□□□ 0.12
SMPD3-211ENST00000568373 FARS2O95363 451 aaKnown RBP15.83■□□□□ 0.12
SMPD3-211ENST00000568373 ZNF735P0CB33 412 aa15.83■□□□□ 0.12
SMPD3-211ENST00000568373 NBL1P41271 181 aa15.83■□□□□ 0.12
SMPD3-211ENST00000568373 IDO2Q6ZQW0 420 aa15.83■□□□□ 0.12
SMPD3-211ENST00000568373 TUSC5Q8IXB3 177 aa15.83■□□□□ 0.12
SMPD3-211ENST00000568373 SEMA6DQ8NFY4 1073 aa15.83■□□□□ 0.12
SMPD3-211ENST00000568373 OR4S1Q8NGB4 309 aa15.83■□□□□ 0.12
SMPD3-211ENST00000568373 OR2AE1Q8NHA4 323 aa15.83■□□□□ 0.12
SMPD3-211ENST00000568373 REEP6Q96HR9 211 aa15.83■□□□□ 0.12
SMPD3-211ENST00000568373 SLC25A21Q9BQT8 299 aaPredicted RBP15.83■□□□□ 0.12
SMPD3-211ENST00000568373 EXO5Q9H790 373 aa15.83■□□□□ 0.12
SMPD3-211ENST00000568373 SLC7A10Q9NS82 523 aa15.83■□□□□ 0.12
SMPD3-211ENST00000568373 MGAT4CQ9UBM8 478 aa15.83■□□□□ 0.12
SMPD3-211ENST00000568373 UPB1Q9UBR1 384 aa15.83■□□□□ 0.12
SMPD3-211ENST00000568373 MGAT4AQ9UM21 535 aa15.83■□□□□ 0.12
SMPD3-211ENST00000568373 FREM1Q5H8C1 2179 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 A0A1W2PP11 408 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 CRTAPO75718 401 aaPredicted RBP15.82■□□□□ 0.12
SMPD3-211ENST00000568373 LCATP04180 440 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 MMP7P09237 267 aaPredicted RBP15.82■□□□□ 0.12
SMPD3-211ENST00000568373 NAT2P11245 290 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 RRADP55042 308 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 SOX8P57073 446 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 SNRPD2P62316 118 aaKnown RBP15.82■□□□□ 0.12
SMPD3-211ENST00000568373 MEF2DQ14814 521 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 SLC22A6Q4U2R8 563 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 OR11H4Q8NGC9 324 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 OR52B4Q8NGK2 314 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 OR5D18Q8NGL1 313 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 ZNF431Q8TF32 576 aaPredicted RBP15.82■□□□□ 0.12
SMPD3-211ENST00000568373 HAS2Q92819 552 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 PRRX2Q99811 253 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 CST11Q9H112 138 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 ACKR4Q9NPB9 350 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 GSTP1P09211 210 aaKnown RBP15.82■□□□□ 0.12
SMPD3-211ENST00000568373 ACKR3P25106 362 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 ARG2P78540 354 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 TMEM53Q6P2H8 277 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 NLRC3Q7RTR2 1065 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.82■□□□□ 0.12
SMPD3-211ENST00000568373 RTN4RL2Q86UN3 420 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 SLC7A5P1Q8MH63 180 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 FAM109AQ8N4B1 249 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 BPIFB2Q8N4F0 458 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 GVQW1Q8N7I0 195 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 RAB3CQ96E17 227 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 URM1Q9BTM9 101 aaKnown RBP15.82■□□□□ 0.12
SMPD3-211ENST00000568373 PRRG4Q9BZD6 226 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 RNF122Q9H9V4 155 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 CALHM2Q9HA72 323 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 BCO1Q9HAY6 547 aa15.82■□□□□ 0.12
SMPD3-211ENST00000568373 UBE2QL1A1L167 161 aa15.81■□□□□ 0.12
SMPD3-211ENST00000568373 OR6C65A6NJZ3 312 aa15.81■□□□□ 0.12
SMPD3-211ENST00000568373 ZNF724A8MTY0 619 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms