RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 CD40P25942 277 aa13.71□□□□□ -0.22
XRCC1-202ENST00000543982 MPV17P39210 176 aa13.71□□□□□ -0.22
XRCC1-202ENST00000543982 PPP1CBP62140 327 aa13.71□□□□□ -0.22
XRCC1-202ENST00000543982 SRSF1Q07955 248 aaKnown RBP eCLIP13.71□□□□□ -0.22
XRCC1-202ENST00000543982 ZNF79Q15937 498 aa13.71□□□□□ -0.22
XRCC1-202ENST00000543982 ZNF181Q2M3W8 571 aa13.71□□□□□ -0.22
XRCC1-202ENST00000543982 ZNF529Q6P280 563 aa13.71□□□□□ -0.22
XRCC1-202ENST00000543982 CNIH2Q6PI25 160 aa13.71□□□□□ -0.22
XRCC1-202ENST00000543982 XKRXQ6PP77 449 aa13.71□□□□□ -0.22
XRCC1-202ENST00000543982 SAMD12Q8N8I0 201 aa13.71□□□□□ -0.22
XRCC1-202ENST00000543982 SLC25A40Q8TBP6 338 aa13.71□□□□□ -0.22
XRCC1-202ENST00000543982 SOSTQ9BQB4 213 aa13.71□□□□□ -0.22
XRCC1-202ENST00000543982 MRI1Q9BV20 369 aa13.71□□□□□ -0.22
XRCC1-202ENST00000543982 CCDC32Q9BV29 185 aa13.71□□□□□ -0.22
XRCC1-202ENST00000543982 SPATA2Q9UM82 520 aa13.71□□□□□ -0.22
XRCC1-202ENST00000543982 USP9XQ93008 2570 aaPredicted RBP13.7□□□□□ -0.22
XRCC1-202ENST00000543982 SPTBN1Q01082 2364 aaKnown RBP13.7□□□□□ -0.22
XRCC1-202ENST00000543982 ATP6V1G2-DDX39BF2Z307 99 aa13.7□□□□□ -0.22
XRCC1-202ENST00000543982 C19orf84I3L1E1 186 aa13.7□□□□□ -0.22
XRCC1-202ENST00000543982 SIAH2O43255 324 aa13.7□□□□□ -0.22
XRCC1-202ENST00000543982 XRCC2O43543 280 aa13.7□□□□□ -0.22
XRCC1-202ENST00000543982 SNRPBP14678 240 aaKnown RBP13.7□□□□□ -0.22
XRCC1-202ENST00000543982 ELK1P19419 428 aa13.7□□□□□ -0.22
XRCC1-202ENST00000543982 DDOSTP39656 456 aa13.7□□□□□ -0.22
XRCC1-202ENST00000543982 OR8B8Q15620 311 aa13.7□□□□□ -0.22
XRCC1-202ENST00000543982 UBE2V2Q15819 145 aa13.7□□□□□ -0.22
XRCC1-202ENST00000543982 HES5Q5TA89 166 aa13.7□□□□□ -0.22
XRCC1-202ENST00000543982 SERPINA12Q8IW75 414 aa13.7□□□□□ -0.22
XRCC1-202ENST00000543982 OR5AS1Q8N127 324 aa13.7□□□□□ -0.22
XRCC1-202ENST00000543982 OR56B2PQ8NGI1 322 aa13.7□□□□□ -0.22
XRCC1-202ENST00000543982 OR1J1Q8NGS3 322 aa13.7□□□□□ -0.22
XRCC1-202ENST00000543982 ZNF671Q8TAW3 534 aa13.7□□□□□ -0.22
XRCC1-202ENST00000543982 CMBLQ96DG6 245 aa13.7□□□□□ -0.22
XRCC1-202ENST00000543982 SDHCQ99643 169 aaPredicted RBP13.7□□□□□ -0.22
XRCC1-202ENST00000543982 SRRQ9GZT4 340 aa13.7□□□□□ -0.22
XRCC1-202ENST00000543982 OR10A4Q9H209 315 aa13.7□□□□□ -0.22
XRCC1-202ENST00000543982 CYSLTR2Q9NS75 346 aa13.7□□□□□ -0.22
XRCC1-202ENST00000543982 RHBDD3Q9Y3P4 386 aa13.7□□□□□ -0.22
XRCC1-202ENST00000543982 LOC390937A0A1W2PQ73 354 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 FAM25AB3EWG3 89 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 FAM25CB3EWG5 89 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 FAM25GB3EWG6 89 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 ZNF12P17014 697 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 PTBP1P26599 531 aaKnown RBP eCLIP13.69□□□□□ -0.222e-7■■■■□ 22
XRCC1-202ENST00000543982 CFPP27918 469 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 GNALP38405 381 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 OR2T2Q6IF00 324 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 CRIP3Q6Q6R5 217 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 SEMA6DQ8NFY4 1073 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 OR13C9Q8NGT0 318 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 MARS2Q96GW9 593 aaKnown RBP13.69□□□□□ -0.22
XRCC1-202ENST00000543982 SPACA5Q96QH8 159 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 FGF23Q9GZV9 251 aaPredicted RBP13.69□□□□□ -0.22
XRCC1-202ENST00000543982 OCEL1Q9H607 264 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 SP140LQ9H930 580 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 ABCB10Q9NRK6 738 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 EIF3KQ9UBQ5 218 aaKnown RBP13.69□□□□□ -0.22
XRCC1-202ENST00000543982 COL12A1Q99715 3063 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 MEGF11A6BM72 1044 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 RGS21Q2M5E4 152 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 C3orf36Q3SXR2 165 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 MTFR2Q6P444 385 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 PGAP1Q75T13 922 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 LYPD6Q86Y78 171 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 GDPD1Q8N9F7 314 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 BHLHE23Q8NDY6 225 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 OR5H6Q8NGV6 325 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 AKAP1Q92667 903 aaKnown RBP eCLIP13.69□□□□□ -0.22
XRCC1-202ENST00000543982 CMTM3Q96MX0 182 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 RGCCQ9H4X1 137 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 LIN7BQ9HAP6 207 aa13.69□□□□□ -0.22
XRCC1-202ENST00000543982 MYO18BQ8IUG5 2567 aa13.68□□□□□ -0.22
XRCC1-202ENST00000543982 ISPDA4D126 451 aa13.68□□□□□ -0.22
XRCC1-202ENST00000543982 CLDN14O95500 239 aa13.68□□□□□ -0.22
XRCC1-202ENST00000543982 APOA1P02647 267 aa13.68□□□□□ -0.22
XRCC1-202ENST00000543982 EIF4EP06730 217 aaKnown RBP13.68□□□□□ -0.22
XRCC1-202ENST00000543982 CALCBP10092 127 aa13.68□□□□□ -0.22
XRCC1-202ENST00000543982 TALDO1P37837 337 aa13.68□□□□□ -0.22
XRCC1-202ENST00000543982 BSPH1Q075Z2 132 aa13.68□□□□□ -0.22
XRCC1-202ENST00000543982 PSG7Q13046 419 aa13.68□□□□□ -0.22
XRCC1-202ENST00000543982 MRPL21Q7Z2W9 205 aaKnown RBP13.68□□□□□ -0.22
XRCC1-202ENST00000543982 LRP11Q86VZ4 500 aa13.68□□□□□ -0.22
XRCC1-202ENST00000543982 LYSMD2Q8IV50 215 aa13.68□□□□□ -0.22
XRCC1-202ENST00000543982 OR52N4Q8NGI2 321 aa13.68□□□□□ -0.22
XRCC1-202ENST00000543982 OR5D14Q8NGL3 314 aa13.68□□□□□ -0.22
XRCC1-202ENST00000543982 KLF14Q8TD94 323 aaPredicted RBP13.68□□□□□ -0.22
XRCC1-202ENST00000543982 NPRL2Q8WTW4 380 aa13.68□□□□□ -0.22
XRCC1-202ENST00000543982 GPR173Q9NS66 373 aa13.68□□□□□ -0.22
XRCC1-202ENST00000543982 CGGBP1Q9UFW8 167 aaPredicted RBP13.68□□□□□ -0.22
XRCC1-202ENST00000543982 FAM208BQ5VWN6 2430 aa13.68□□□□□ -0.22
XRCC1-202ENST00000543982 CD300LBA8K4G0 201 aa13.67□□□□□ -0.22
XRCC1-202ENST00000543982 GMDSO60547 372 aa13.67□□□□□ -0.22
XRCC1-202ENST00000543982 CD37P11049 281 aa13.67□□□□□ -0.22
XRCC1-202ENST00000543982 ZNF20P17024 532 aa13.67□□□□□ -0.22
XRCC1-202ENST00000543982 CLDN12P56749 244 aa13.67□□□□□ -0.22
XRCC1-202ENST00000543982 NKX6-1P78426 367 aaPredicted RBP13.67□□□□□ -0.22
XRCC1-202ENST00000543982 MALLQ13021 153 aa13.67□□□□□ -0.22
XRCC1-202ENST00000543982 RIN1Q13671 783 aa13.67□□□□□ -0.22
XRCC1-202ENST00000543982 STEAP3Q658P3 488 aa13.67□□□□□ -0.22
XRCC1-202ENST00000543982 FBXW12Q6X9E4 464 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms