RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 UTS2O95399 124 aa11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 ZNF708P17019 499 aa11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 MPZP25189 248 aa11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 CRABP1P29762 137 aa11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 RBP2P50120 134 aa11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 SNU13P55769 128 aaKnown RBP11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 UBE2KP61086 200 aa11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 Q7L0L9 218 aa11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 ZNF610Q8N9Z0 462 aa11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 SLC25A43Q8WUT9 341 aaPredicted RBP11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 MARS2Q96GW9 593 aaKnown RBP11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 CCNL2Q96S94 520 aaPredicted RBP11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 S1PR5Q9H228 398 aa11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 SPAG17Q6Q759 2223 aa11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 RTTNQ86VV8 2226 aa11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 CDC14CA4D256 554 aa11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 PRAMEF26H0Y7S4 382 aa11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 PPIHO43447 177 aaKnown RBP11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 XRCC2O43543 280 aa11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 CHRM2P08172 466 aa11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 GP1BBP13224 206 aa11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 C5AR1P21730 350 aa11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 FMODQ06828 376 aa11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 TMEM182Q6ZP80 229 aaPredicted RBP11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 C12orf76Q8N812 135 aaPredicted RBP11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 OR5D18Q8NGL1 313 aa11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 MR1Q95460 341 aa11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 C8orf44Q96CB5 159 aa11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 ASB16Q96NS5 453 aa11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 KLHDC3Q9BQ90 382 aa11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.42□□□□□ -0.58
SFSWAP-209ENST00000540469 TRAV36DV7A0A075B6V5 113 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 A0A087X0M5 115 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 A0A1B0GX30 115 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 ZNF587BE7ETH6 402 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 HSD11B1P28845 292 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 SUPT4H1P63272 117 aaKnown RBP11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 SLC35A1P78382 337 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 TMEM268Q5VZI3 342 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 SGPP2Q8IWX5 399 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 CCDC54Q8NEL0 328 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 BAHD1Q8TBE0 780 aaPredicted RBP11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 GTF3AQ92664 365 aaKnown RBP11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 ADAT3Q96EY9 351 aaPredicted RBP11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 C14orf144Q96I85 54 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 ARHGAP5-AS1Q96IT6 56 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 TGM7Q96PF1 710 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 TMEM106CQ9BVX2 250 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 PARPBPQ9NWS1 579 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 PRODH2Q9UF12 536 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 SLC5A6Q9Y289 635 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 C17orf51A8MQB3 221 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 DIRAS3O95661 229 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 ADH1BP00325 375 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 GLI4P10075 376 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 FABP4P15090 132 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 RPS23P62266 143 aaKnown RBP11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 GKN2Q86XP6 184 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 SULF2Q8IWU5 870 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 COMMD1Q8N668 190 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 NPRL2Q8WTW4 380 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 URM1Q9BTM9 101 aaKnown RBP11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 GPR61Q9BZJ8 451 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 NUP210LQ5VU65 1888 aa11.41□□□□□ -0.58
SFSWAP-209ENST00000540469 A0A1W2PP11 408 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 BTBD17A6NE02 478 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 ZNF726A6NNF4 738 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 FAM157AC9JC47 383 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 AHSA1O95433 338 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 CTSBP07858 339 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 HIST1H1DP16402 221 aaKnown RBP11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 IL12BP29460 328 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 PMELP40967 661 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 PPP1CAP62136 330 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 GAMTQ14353 236 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 AKR1C8PQ5T2L2 129 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 OR51T1Q8NGJ9 327 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 OR13G1Q8NGZ3 307 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 PHOSPHO2Q8TCD6 241 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 ERGIC1Q969X5 290 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 FAM71F1Q96KD3 344 aaPredicted RBP11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 ATG101Q9BSB4 218 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 TBL1XR1Q9BZK7 514 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 FOXQ1Q9C009 403 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 LMAN1LQ9HAT1 526 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 PLA2G2EQ9NZK7 142 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 THAP10Q9P2Z0 257 aaPredicted RBP11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 STARD10Q9Y365 291 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 NPIPA5E9PKD4 350 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 HCRTR1O43613 425 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 SLC2A1P11166 492 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 CTNNB1P35222 781 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 AFF3P51826 1226 aaKnown RBP11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 FAM3AP98173 230 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 CHAF1BQ13112 559 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 SURF2Q15527 256 aaPredicted RBP11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 DNM1P34Q6PK57 102 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 DPPA2Q7Z7J5 298 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 CHST5Q9GZS9 411 aa11.4□□□□□ -0.58
SFSWAP-209ENST00000540469 SLC2A4RGQ9NR83 387 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms