RNA–Protein interactions for RNA: ENST00000514183.5

RACK1-231, Transcript of receptor for activated C kinase 1, human

TSL 2

Gene RACK1, Length 1,439 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-231	ENST00000514183	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	LRRTM1	Q86UE6	522 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	LYSMD2	Q8IV50	215 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	OR8H2	Q8N162	312 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	CENPS	Q8N2Z9	138 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	ZNF433	Q8N7K0	673 aa	Predicted RBP	5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	SAMD12	Q8N8I0	201 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	CNEP1R1	Q8N9A8	125 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	FNDC9	Q8TBE3	224 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	TRMT10A	Q8TBZ6	339 aa	Known RBP	5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	CHPT1	Q8WUD6	406 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	THRSP	Q92748	146 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	TMEM106A	Q96A25	262 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	ALKBH3	Q96Q83	286 aa	Predicted RBP	5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	SDHC	Q99643	169 aa	Predicted RBP	5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	GFI1	Q99684	422 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	SH3GL3	Q99963	347 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	CCDC32	Q9BV29	185 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	TMPRSS13	Q9BYE2	586 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	PRRG4	Q9BZD6	226 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	SRR	Q9GZT4	340 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	PBOV1	Q9GZY1	135 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	ZCCHC4	Q9H5U6	513 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	NIPAL2	Q9H841	368 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	CRLF2	Q9HC73	371 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	GPR35	Q9HC97	309 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	PNRC2	Q9NPJ4	139 aa	Known RBP	5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	EMC3	Q9P0I2	261 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	CLCF1	Q9UBD9	225 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	MALT1	Q9UDY8	824 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	CLEC4A	Q9UMR7	237 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	DHDH	Q9UQ10	334 aa		5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	NOSIP	Q9Y314	301 aa	Known RBP	5.8	□□□□□ -1.48
RACK1-231	ENST00000514183	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	5.79	□□□□□ -1.48	3e-12	■■■■□ 20.9
RACK1-231	ENST00000514183	TRAV8-7	A0A075B6U6	113 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	ARPC4-TTLL3	A0A0A6YYG9	625 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	ISPD	A4D126	451 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	ANXA2P2	A6NMY6	339 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	AIP	O00170	330 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	MRPL33	O75394	65 aa	Known RBP	5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	TNFSF13	O75888	250 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	KRT33A	O76009	404 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	ISG15	P05161	165 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	EIF4E	P06730	217 aa	Known RBP	5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	ANXA2	P07355	339 aa	Known RBP	5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	UBC	P0CG48	685 aa	Known RBP	5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	B4GALT1	P15291	398 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	ADRA2C	P18825	462 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	ELK1	P19419	428 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	NPR2	P20594	1047 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	CX3CR1	P49238	355 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	EVX1	P49640	407 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	PRKX	P51817	358 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	GRB2	P62993	217 aa	Known RBP	5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	HIST1H3A	P68431	136 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	FAM27E3	Q08E93	113 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	FOXF2	Q12947	444 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	RNPS1	Q15287	305 aa	Known RBP	5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	ZNF79	Q15937	498 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	CEACAM16	Q2WEN9	425 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	TRIM16L	Q309B1	348 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	CCDC92	Q53HC0	331 aa	Predicted RBP	5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	HIST2H3PS2	Q5TEC6	136 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	TSPO2	Q5TGU0	170 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	FAM27B	Q5VT28	67 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	TMEM244	Q5VVB8	128 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	STAC2	Q6ZMT1	411 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183		Q6ZNX1	250 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	DCDC5	Q6ZRR9	648 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	HIST2H3A	Q71DI3	136 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	RHOU	Q7L0Q8	258 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	TUSC5	Q8IXB3	177 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	ELMOD2	Q8IZ81	293 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	LRRC18	Q8N456	261 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	ZNF283	Q8N7M2	679 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	DNAAF1	Q8NEP3	725 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	GJC3	Q8NFK1	279 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	OR13C3	Q8NGS6	347 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	OR5H6	Q8NGV6	325 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	ZNF671	Q8TAW3	534 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	FBXW5	Q969U6	566 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	STARD4	Q96DR4	205 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	SOST	Q9BQB4	213 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	SHARPIN	Q9H0F6	387 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	ESRP2	Q9H6T0	727 aa	Known RBP	5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	MOB1A	Q9H8S9	216 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	BCO1	Q9HAY6	547 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	GLRX2	Q9NS18	164 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	DDX28	Q9NUL7	540 aa	Known RBP	5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	TMEM38B	Q9NVV0	291 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	C14orf119	Q9NWQ9	140 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	TAS2R4	Q9NYW5	299 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	ABRACL	Q9P1F3	81 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	EXTL2	Q9UBQ6	330 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	NUFIP1	Q9UHK0	495 aa	Known RBP	5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	HHLA2	Q9UM44	414 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	PROCR	Q9UNN8	238 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	ZNF175	Q9Y473	711 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183	N6AMT1	Q9Y5N5	214 aa		5.79	□□□□□ -1.48
RACK1-231	ENST00000514183		V9GY05	133 aa		5.79	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms