RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 OR2G2Q8NGZ5 317 aa9.41□□□□□ -0.9
APTX-230ENST00000494649 ZNF184Q99676 751 aaPredicted RBP9.41□□□□□ -0.9
APTX-230ENST00000494649 GSX1Q9H4S2 264 aaPredicted RBP9.41□□□□□ -0.9
APTX-230ENST00000494649 RGCCQ9H4X1 137 aa9.41□□□□□ -0.9
APTX-230ENST00000494649 OPA3Q9H6K4 179 aa9.41□□□□□ -0.9
APTX-230ENST00000494649 GCM1Q9NP62 436 aa9.41□□□□□ -0.9
APTX-230ENST00000494649 FGF20Q9NP95 211 aaPredicted RBP9.41□□□□□ -0.9
APTX-230ENST00000494649 MRPL15Q9P015 296 aaKnown RBP9.41□□□□□ -0.9
APTX-230ENST00000494649 IL19Q9UHD0 177 aa9.41□□□□□ -0.9
APTX-230ENST00000494649 PSORS1C1Q9UIG5 152 aa9.41□□□□□ -0.9
APTX-230ENST00000494649 PPP1R3CQ9UQK1 317 aa9.41□□□□□ -0.9
APTX-230ENST00000494649 A0A0U1RQV5 110 aa9.4□□□□□ -0.9
APTX-230ENST00000494649 A0A1B0GTI1 187 aa9.4□□□□□ -0.9
APTX-230ENST00000494649 LOC107986453A0A1B0GWG9 222 aa9.4□□□□□ -0.9
APTX-230ENST00000494649 A6NLC8 198 aa9.4□□□□□ -0.9
APTX-230ENST00000494649 SYT7O43581 403 aa9.4□□□□□ -0.9
APTX-230ENST00000494649 LALBAP00709 142 aa9.4□□□□□ -0.9
APTX-230ENST00000494649 ACHEP22303 614 aa9.4□□□□□ -0.9
APTX-230ENST00000494649 CFL1P23528 166 aaKnown RBP9.4□□□□□ -0.9
APTX-230ENST00000494649 IL2RGP31785 369 aa9.4□□□□□ -0.9
APTX-230ENST00000494649 GNALP38405 381 aa9.4□□□□□ -0.9
APTX-230ENST00000494649 NR4A2P43354 598 aa9.4□□□□□ -0.9
APTX-230ENST00000494649 GPR6P46095 362 aaPredicted RBP9.4□□□□□ -0.9
APTX-230ENST00000494649 GMFBP60983 142 aa9.4□□□□□ -0.9
APTX-230ENST00000494649 PRDX4Q13162 271 aa9.4□□□□□ -0.9
APTX-230ENST00000494649 RIN1Q13671 783 aa9.4□□□□□ -0.9
APTX-230ENST00000494649 SNCBQ16143 134 aa9.4□□□□□ -0.9
APTX-230ENST00000494649 KCTD8Q6ZWB6 473 aa9.4□□□□□ -0.9
APTX-230ENST00000494649 MED13LQ71F56 2210 aa9.4□□□□□ -0.9
APTX-230ENST00000494649 BOLLQ8N9W6 283 aaKnown RBP9.4□□□□□ -0.9
APTX-230ENST00000494649 SEMA6DQ8NFY4 1073 aa9.4□□□□□ -0.9
APTX-230ENST00000494649 NPRL2Q8WTW4 380 aa9.4□□□□□ -0.9
APTX-230ENST00000494649 PDCD1LG2Q9BQ51 273 aa9.4□□□□□ -0.9
APTX-230ENST00000494649 MOB1AQ9H8S9 216 aa9.4□□□□□ -0.9
APTX-230ENST00000494649 CHODLQ9H9P2 273 aa9.4□□□□□ -0.9
APTX-230ENST00000494649 NKIRAS2Q9NYR9 191 aa9.4□□□□□ -0.9
APTX-230ENST00000494649 DIMT1Q9UNQ2 313 aaKnown RBP9.4□□□□□ -0.9
APTX-230ENST00000494649 A0A1B0GVI7 797 aa9.4□□□□□ -0.91
APTX-230ENST00000494649 DHRS3O75911 302 aa9.4□□□□□ -0.91
APTX-230ENST00000494649 CD55P08174 381 aa9.4□□□□□ -0.91
APTX-230ENST00000494649 TNFRSF1AP19438 455 aa9.4□□□□□ -0.91
APTX-230ENST00000494649 HSPA13P48723 471 aa9.4□□□□□ -0.91
APTX-230ENST00000494649 CSNK2BP67870 215 aa9.4□□□□□ -0.91
APTX-230ENST00000494649 WDR86Q86TI4 376 aa9.4□□□□□ -0.91
APTX-230ENST00000494649 C18orf12Q96KH6 178 aa9.4□□□□□ -0.91
APTX-230ENST00000494649 DIRC2Q96SL1 478 aa9.4□□□□□ -0.91
APTX-230ENST00000494649 TMUB1Q9BVT8 246 aa9.4□□□□□ -0.91
APTX-230ENST00000494649 FGF23Q9GZV9 251 aaPredicted RBP9.4□□□□□ -0.91
APTX-230ENST00000494649 METTL17Q9H7H0 456 aaPredicted RBP9.4□□□□□ -0.91
APTX-230ENST00000494649 PLEKHA1Q9HB21 404 aa9.4□□□□□ -0.91
APTX-230ENST00000494649 INPP5EQ9NRR6 644 aa9.4□□□□□ -0.91
APTX-230ENST00000494649 GPR173Q9NS66 373 aa9.4□□□□□ -0.91
APTX-230ENST00000494649 CHCHD3Q9NX63 227 aaKnown RBP9.4□□□□□ -0.91
APTX-230ENST00000494649 UBAP1Q9NZ09 502 aa9.4□□□□□ -0.91
APTX-230ENST00000494649 ERVK-18Q9QC07 812 aa9.4□□□□□ -0.91
APTX-230ENST00000494649 DYSFO75923 2080 aa9.39□□□□□ -0.91
APTX-230ENST00000494649 CSPG4Q6UVK1 2322 aa9.39□□□□□ -0.91
APTX-230ENST00000494649 hCG_1807616A0A1W2PRN6 198 aa9.39□□□□□ -0.91
APTX-230ENST00000494649 EFCAB10A6NFE3 127 aa9.39□□□□□ -0.91
APTX-230ENST00000494649 IGLV3-1P01715 115 aa9.39□□□□□ -0.91
APTX-230ENST00000494649 ADH4P08319 380 aa9.39□□□□□ -0.91
APTX-230ENST00000494649 INHBBP09529 407 aa9.39□□□□□ -0.91
APTX-230ENST00000494649 THBS2P35442 1172 aa9.39□□□□□ -0.91
APTX-230ENST00000494649 DDOSTP39656 456 aa9.39□□□□□ -0.91
APTX-230ENST00000494649 PMELP40967 661 aa9.39□□□□□ -0.91
APTX-230ENST00000494649 MAP2K3P46734 347 aa9.39□□□□□ -0.91
APTX-230ENST00000494649 SRP9P49458 86 aaKnown RBP9.39□□□□□ -0.91
APTX-230ENST00000494649 GPM6AP51674 278 aa9.39□□□□□ -0.91
APTX-230ENST00000494649 RIPPLY1Q0D2K3 151 aa9.39□□□□□ -0.91
APTX-230ENST00000494649 ALKBH1Q13686 389 aaKnown RBP9.39□□□□□ -0.91
APTX-230ENST00000494649 MOB3CQ70IA8 216 aa9.39□□□□□ -0.91
APTX-230ENST00000494649 KCTD20Q7Z5Y7 419 aa9.39□□□□□ -0.91
APTX-230ENST00000494649 BATF2Q8N1L9 274 aa9.39□□□□□ -0.91
APTX-230ENST00000494649 KLHL36Q8N4N3 616 aa9.39□□□□□ -0.91
APTX-230ENST00000494649 ZNF676Q8N7Q3 588 aa9.39□□□□□ -0.91
APTX-230ENST00000494649 OR14K1Q8NGZ2 314 aa9.39□□□□□ -0.91
APTX-230ENST00000494649 TRMT10AQ8TBZ6 339 aaKnown RBP9.39□□□□□ -0.91
APTX-230ENST00000494649 HPSE2Q8WWQ2 592 aa9.39□□□□□ -0.91
APTX-230ENST00000494649 CCDC90BQ9GZT6 254 aa9.39□□□□□ -0.91
APTX-230ENST00000494649 TMEM106BQ9NUM4 274 aa9.39□□□□□ -0.91
APTX-230ENST00000494649 RAB26Q9ULW5 256 aa9.39□□□□□ -0.91
APTX-230ENST00000494649 WIPI2Q9Y4P8 454 aa9.39□□□□□ -0.91
APTX-230ENST00000494649 SIRT4Q9Y6E7 314 aaPredicted RBP9.39□□□□□ -0.91
APTX-230ENST00000494649 A0A096LNT2 108 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 TRBV2A0A0J9YWF9 115 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 ZNF816-ZNF321PA0A0X1KG74 233 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 ACOD1A6NK06 481 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 ANXA2P2A6NMY6 339 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 VWC2LB2RUY7 222 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 CLDN25C9JDP6 229 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 GMDSO60547 372 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 ZFPL1O95159 310 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 CSF3P09919 207 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 USF1P22415 310 aaPredicted RBP9.38□□□□□ -0.91
APTX-230ENST00000494649 GBX2P52951 348 aaPredicted RBP9.38□□□□□ -0.91
APTX-230ENST00000494649 DSCR9P59020 149 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 PLCXD3Q63HM9 321 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 SFRP4Q6FHJ7 346 aaPredicted RBP9.38□□□□□ -0.91
APTX-230ENST00000494649 DOK3Q7L591 496 aa9.38□□□□□ -0.91
APTX-230ENST00000494649 SYS1Q8N2H4 156 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms