RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 KCNIP1Q9NZI2 227 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 RABL2AQ9UBK7 228 aaPredicted RBP3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 KIF25Q9UIL4 384 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 OR51B4Q9Y5P0 310 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 MMP24Q9Y5R2 645 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 IGHV3OR16-13A0A075B7E8 117 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 HAT1O14929 419 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 OR7A10O76100 309 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 SNAPINO95295 136 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 CST1P01037 141 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 PABPC4LP0CB38 370 aaKnown RBP3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 COX6A1P12074 109 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 KPNA2P52292 529 aaKnown RBP3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 ZNF136P52737 540 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 ZNF544Q6NX49 715 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 TMIGD1Q6UXZ0 262 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 Q6ZR54 194 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 SHISA6Q6ZSJ9 500 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 ERI1Q8IV48 349 aaKnown RBP3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 C6orf223Q8N319 242 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 C14orf178Q8N769 122 aaPredicted RBP3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 FNDC5Q8NAU1 212 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 BBS1Q8NFJ9 593 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 RAB3IL1Q8TBN0 382 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 FANK1Q8TC84 345 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 BRSK1Q8TDC3 778 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 PYROXD1Q8WU10 500 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 DCUN1D4Q92564 292 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 RPUSD4Q96CM3 377 aaKnown RBP3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 HIST1H4GQ99525 98 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 ARHGDIGQ99819 225 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 MED18Q9BUE0 208 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 TM6SF2Q9BZW4 377 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 SELENOIQ9C0D9 397 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 WDR54Q9H977 334 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 AIG1Q9NVV5 245 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 PSMC3IPQ9P2W1 217 aaPredicted RBP3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 SLC17A4Q9Y2C5 497 aa3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 CSDC2Q9Y534 153 aaKnown RBP3.46□□□□□ -1.86
SSX2IP-208ENST00000490476 A0A0J9YXY3 114 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 A0A1W2PPE3 182 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 A0A1W2PPV9 198 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 F5H5T6 163 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 PPP1R2P9O14990 202 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 TMEM50AO95807 157 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 GABRA1P14867 456 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 KITLGP21583 273 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 PRTN3P24158 256 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 COX7A1P24310 79 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 VDAC2P45880 294 aaPredicted RBP3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 APOC4P55056 127 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 KCNJ2P63252 427 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 PDIA2Q13087 525 aaKnown RBP3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 PYCR3Q53H96 274 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 C1orf94Q6P1W5 598 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 NDUFAF7Q7L592 441 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 PRR22Q8IZ63 422 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 C11orf42Q8N5U0 333 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 CEP112Q8N8E3 955 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 SPATA4Q8NEY3 305 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 OR9G1Q8NH87 305 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 ANKRD36BP1Q96IX9 119 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 WFIKKN1Q96NZ8 548 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 MS4A4EQ96PG1 132 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 TECTBQ96PL2 329 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 DEFB127Q9H1M4 99 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 NIPAL2Q9H841 368 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 PLSCR3Q9NRY6 295 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 GIN1Q9NXP7 522 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 ASF1AQ9Y294 204 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 WIF1Q9Y5W5 379 aa3.45□□□□□ -1.86
SSX2IP-208ENST00000490476 ARFGEF3Q5TH69 2177 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 A0A1W2PP18 115 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 WI2-2373I1.2A0A1W2PRP0 233 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 GOLGA6L4A6NEF3 574 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 OR2AG2A6NM03 316 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 ANKRD63C9JTQ0 380 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 ZNF780AO75290 641 aaPredicted RBP3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 SRSF10O75494 262 aaKnown RBP3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 IGKV3-15P01624 115 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 TNNC2P02585 160 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 CSF3P09919 207 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 OMGP23515 440 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 IFNA8P32881 189 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 GLP1RP43220 463 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 CRYBB2P43320 205 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 PRRX1P54821 245 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 XKR7Q5GH72 579 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 PAGE3Q5JUK9 113 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 CARD17Q5XLA6 110 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 LUZP2Q86TE4 346 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 ZNF546Q86UE3 836 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 BLIDQ8IZY5 108 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 C12orf29Q8N999 325 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 CCDC71LQ8N9Z2 235 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 TMIGD2Q96BF3 282 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 ITCHQ96J02 903 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 HSFY1Q96LI6 401 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 MBOAT4Q96T53 435 aa3.44□□□□□ -1.86
SSX2IP-208ENST00000490476 GBA3Q9H227 469 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms