RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 MALLQ13021 153 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 OR8B8Q15620 311 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 UBE2V2Q15819 145 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 ZNF718Q3SXZ3 478 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 BEX5Q5H9J7 111 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 FAM76BQ5HYJ3 339 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 SPATA46Q5T0L3 261 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 C22orf42Q6IC83 251 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 OR2T2Q6IF00 324 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 ADAM5Q6NVV9 412 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 ZNF544Q6NX49 715 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 MEX3BQ6ZN04 569 aaKnown RBP5.09□□□□□ -1.59
USP39-213ENST00000467885 Q6ZR03 302 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 RFPL4BQ6ZWI9 263 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 PGAP1Q75T13 922 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 LRRTM1Q86UE6 522 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 NR2C2APQ86WQ0 139 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 ZNF295-AS1Q8N0V1 137 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 CCDC54Q8NEL0 328 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 SEMA6DQ8NFY4 1073 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 OR5D14Q8NGL3 314 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 AKAP1Q92667 903 aaKnown RBP eCLIP5.09□□□□□ -1.59
USP39-213ENST00000467885 C10orf35Q96D05 121 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 FAM71F1Q96KD3 344 aaPredicted RBP5.09□□□□□ -1.59
USP39-213ENST00000467885 DERL3Q96Q80 235 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 OR14A2Q96R54 314 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 GFI1Q99684 422 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 KCNS3Q9BQ31 491 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 COMMD4Q9H0A8 199 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 MOB1AQ9H8S9 216 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 CA10Q9NS85 328 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 PURGQ9UJV8 347 aaKnown RBP5.09□□□□□ -1.59
USP39-213ENST00000467885 FZR1Q9UM11 496 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 GTF2A1LQ9UNN4 478 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 SPEF1Q9Y4P9 236 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 A0A1B0GVI7 797 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 LOC107986453A0A1B0GWG9 222 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 GGT3PA6NGU5 568 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 DHRS7CA6NNS2 312 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 IQCF6A8MYZ5 107 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 H0YL77 283 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 RGS9O75916 674 aaPredicted RBP5.08□□□□□ -1.6
USP39-213ENST00000467885 CD8AP01732 235 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 ALDOBP05062 364 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 CD3EP07766 207 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 CLEC2LP0C7M8 214 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 ZNF12P17014 697 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 ATF1P18846 271 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 CFL1P23528 166 aaKnown RBP5.08□□□□□ -1.6
USP39-213ENST00000467885 APOBEC3AP31941 199 aaPredicted RBP5.08□□□□□ -1.6
USP39-213ENST00000467885 SDC2P34741 201 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 SERPINF1P36955 418 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 EVX1P49640 407 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 MMP15P51511 669 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 NCS1P62166 190 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 SNTB2Q13425 540 aaKnown RBP5.08□□□□□ -1.6
USP39-213ENST00000467885 SPCS2Q15005 226 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 ADIPOQQ15848 244 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 DMRTC1Q5HYR2 192 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 ZBTB37Q5TC79 503 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 SLC22A25Q6T423 547 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 PAMR1Q6UXH9 720 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 UNQ6126/PRO20091Q6UXV3 157 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 UTS2BQ765I0 119 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 C11orf53Q8IXP5 236 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 OR5AS1Q8N127 324 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 OR8G5Q8NG78 346 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 OR13C3Q8NGS6 347 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 ZNF420Q8TAQ5 688 aaPredicted RBP5.08□□□□□ -1.6
USP39-213ENST00000467885 SYNPRQ8TBG9 265 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 PIGCQ92535 297 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 PIGTQ969N2 578 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 TMEM106AQ96A25 262 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 C12orf43Q96C57 262 aaKnown RBP5.08□□□□□ -1.6
USP39-213ENST00000467885 ISOC1Q96CN7 298 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 PIK3IP1Q96FE7 263 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 BCL7BQ9BQE9 202 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 MRPL37Q9BZE1 423 aaKnown RBP5.08□□□□□ -1.6
USP39-213ENST00000467885 FGF23Q9GZV9 251 aaPredicted RBP5.08□□□□□ -1.6
USP39-213ENST00000467885 ZNF442Q9H7R0 627 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 SNTG1Q9NSN8 517 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 CISD1Q9NZ45 108 aaKnown RBP5.08□□□□□ -1.6
USP39-213ENST00000467885 MYEF2Q9P2K5 600 aaKnown RBP5.08□□□□□ -1.6
USP39-213ENST00000467885 KCNN3Q9UGI6 736 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 DUSP13Q9UII6 198 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 FOXJ3Q9UPW0 622 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 DHDHQ9UQ10 334 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 PIGLQ9Y2B2 252 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 GSTK1Q9Y2Q3 226 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 CMAHPQ9Y471 501 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 ATP23Q9Y6H3 246 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 HIVEP3Q5T1R4 2406 aa5.08□□□□□ -1.6
USP39-213ENST00000467885 A0A0G2JK05 382 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 LOC100506127A0A0U1RQW1 187 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 LOC100289279A0A1B0GTE1 492 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 MEGF11A6BM72 1044 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 A6NNC1 897 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 ZNF850A8MQ14 1090 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 VSTM5A8MXK1 200 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 PRSS44E7EML9 344 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms