RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 A0A1W2PPK0 400 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 A8MVM7 634 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 H3BRB1 525 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 H7BYZ3 331 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 J3QR06 171 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 M0QYG6 137 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 M0QZQ0 153 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 DVL2O14641 736 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 HSD17B6O14756 317 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 GEMIN2O14893 280 aaKnown RBP5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 LDLRAD4O15165 306 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 BPNT1O95861 308 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 HLA-HP01893 362 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 LCATP04180 440 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 SMIM10L2AP0DMW4 78 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 SMIM10L2BP0DMW5 78 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 CD99P14209 185 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 CSNK2A2P19784 350 aaPredicted RBP5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 CD22P20273 847 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 SERPINA2P20848 420 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 AK4P27144 223 aaPredicted RBP5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 SFTPDP35247 375 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 WNT5AP41221 380 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 DNASE1L1P49184 302 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 CNN1P51911 297 aaKnown RBP5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 NCBP2P52298 156 aaKnown RBP eCLIP5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 CRYBB1P53674 252 aaPredicted RBP5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 BIDP55957 195 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 CLDN18P56856 261 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 SLC37A1P57057 533 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 RPL23AP62750 156 aaKnown RBP5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 SUMO1P63165 101 aaKnown RBP5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 EIF3IQ13347 325 aaKnown RBP5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 RAB32Q13637 225 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 TGIF1Q15583 401 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 NSDHLQ15738 373 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 PSG3Q16557 428 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 IAH1Q2TAA2 248 aaPredicted RBP5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 C2orf76Q3KRA6 126 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 COX19Q49B96 90 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 FCRL6Q6DN72 434 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 CDPF1Q6NVV7 123 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 KCTD18Q6PI47 426 aaPredicted RBP5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 FBXO46Q6PJ61 603 aaPredicted RBP5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 C16orf54Q6UWD8 224 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 UNQ6494/PRO21346Q6UXR6 183 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF66Q6ZN08 573 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 TEX43Q6ZNM6 134 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 C20orf204Q6ZNR8 217 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 C8orf86Q6ZUL3 223 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 AMIGO3Q86WK7 504 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 PNPLA1Q8N8W4 532 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 DCAF4L2Q8NA75 395 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF248Q8NDW4 579 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR51D1Q8NGF3 324 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR5H2Q8NGV7 314 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR5K2Q8NHB8 316 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF563Q8TA94 476 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 FAM213BQ8TBF2 198 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZCCHC10Q8TBK6 192 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 CPT1CQ8TCG5 803 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 RNF128Q8TEB7 428 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 WFIKKN2Q8TEU8 576 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 TMEM255BQ8WV15 326 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 TMEM40Q8WWA1 233 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 TSLPQ969D9 159 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 IGSF8Q969P0 613 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF514Q96K75 400 aaPredicted RBP5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR10C1Q96KK4 312 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 AMDHD1Q96NU7 426 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 HIST1H2AAQ96QV6 131 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 RNF2Q99496 336 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 SLC6A7Q99884 636 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 PDCD1LG2Q9BQ51 273 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 PYGO2Q9BRQ0 406 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 AGMATQ9BSE5 352 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 NMNAT2Q9BZQ4 307 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 GPR84Q9NQS5 396 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 PRDM6Q9NQX0 595 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 PNO1Q9NRX1 252 aaKnown RBP5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF701Q9NV72 531 aaPredicted RBP5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 AURKAIP1Q9NWT8 199 aaPredicted RBP5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF586Q9NXT0 402 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 FBLN5Q9UBX5 448 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 SERGEFQ9UGK8 458 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 IL19Q9UHD0 177 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 NAT8Q9UHE5 227 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 FBXO4Q9UKT5 387 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 SLC45A2Q9UMX9 530 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 SIGLEC7Q9Y286 467 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 GPR55Q9Y2T6 319 aaPredicted RBP5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 MRPS23Q9Y3D9 190 aaKnown RBP5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 WDR45Q9Y484 360 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 ENTPD2Q9Y5L3 495 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 COX11Q9Y6N1 276 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF780BQ9Y6R6 833 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 WDR90Q96KV7 1748 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 KIAA1671Q9BY89 1806 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 IGHV2-70DA0A0C4DH43 119 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 169.6 ms