RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 APH1AQ96BI3 265 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 THOC3Q96J01 351 aaKnown RBP10.86□□□□□ -0.67
UBR4-205ENST00000417040 LAT2Q9GZY6 243 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 C9orf170A2RU37 121 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 YBX1P67809 324 aaKnown RBP10.85□□□□□ -0.67
UBR4-205ENST00000417040 UQCC3Q6UW78 93 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 OR10V1Q8NGI7 309 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 B9D1Q9UPM9 204 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 ABLIM3O94929 683 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 ST6GAL1P15907 406 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 PPP1CBP62140 327 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 HIST1H3AP68431 136 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 SLC25A26Q70HW3 274 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 S100A7AQ86SG5 101 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 CXorf67Q86X51 503 aaPredicted RBP10.85□□□□□ -0.67
UBR4-205ENST00000417040 ROBO4Q8WZ75 1007 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 LOC102723971A0A1B0GUV8 181 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 DBX1A6NMT0 343 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 OR5I1Q13606 314 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 TCTN1Q2MV58 587 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 FAM26DQ5JW98 314 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 PARM1Q6UWI2 310 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 MSRB3Q8IXL7 192 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 VN1R2Q8NFZ6 395 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 ZBP1Q9H171 429 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 ADAM20O43506 726 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 B4GALT1P15291 398 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 CD96P40200 585 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 TMEM128Q5BJH2 165 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 ACSM6Q6P461 480 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 C17orf47Q8NEP4 570 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 OR11H7Q8NGC8 314 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 DPF1Q92782 380 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 TRMT61AQ96FX7 289 aaKnown RBP10.85□□□□□ -0.67
UBR4-205ENST00000417040 ARHGAP5-AS1Q96IT6 56 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 KIAA1324LA8MWY0 1029 aaPredicted RBP10.85□□□□□ -0.67
UBR4-205ENST00000417040 GYPAP02724 150 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 COX5AP20674 150 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 CACNA1SQ13698 1873 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 TIGITQ495A1 244 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 LSMEM1Q8N8F7 131 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 ADGRG7Q96K78 797 aa10.85□□□□□ -0.67
UBR4-205ENST00000417040 CD63P08962 238 aa10.84□□□□□ -0.67
UBR4-205ENST00000417040 OR10X1Q8NGY0 326 aa10.84□□□□□ -0.67
UBR4-205ENST00000417040 KCND3Q9UK17 655 aa10.84□□□□□ -0.67
UBR4-205ENST00000417040 TIMM10BQ9Y5J6 103 aa10.84□□□□□ -0.67
UBR4-205ENST00000417040 A0A0A6YYD5 115 aa10.84□□□□□ -0.67
UBR4-205ENST00000417040 A0A1W2PR80 420 aa10.84□□□□□ -0.67
UBR4-205ENST00000417040 NOVA1P51513 510 aaKnown RBP10.84□□□□□ -0.67
UBR4-205ENST00000417040 DHRS2Q13268 280 aa10.84□□□□□ -0.67
UBR4-205ENST00000417040 WDR38Q5JTN6 314 aa10.84□□□□□ -0.67
UBR4-205ENST00000417040 LIN7CQ9NUP9 197 aaKnown RBP10.84□□□□□ -0.67
UBR4-205ENST00000417040 IL5P05113 134 aa10.84□□□□□ -0.67
UBR4-205ENST00000417040 EN2P19622 333 aaPredicted RBP10.84□□□□□ -0.67
UBR4-205ENST00000417040 CHRNA7P36544 502 aa10.84□□□□□ -0.67
UBR4-205ENST00000417040 METAP1P53582 386 aa10.84□□□□□ -0.67
UBR4-205ENST00000417040 PRSS12P56730 875 aa10.84□□□□□ -0.67
UBR4-205ENST00000417040 OSR2Q8N2R0 312 aa10.84□□□□□ -0.67
UBR4-205ENST00000417040 TXNIPQ9H3M7 391 aa10.84□□□□□ -0.67
UBR4-205ENST00000417040 FAM24AA6NFZ4 105 aa10.84□□□□□ -0.67
UBR4-205ENST00000417040 CD22P20273 847 aa10.84□□□□□ -0.67
UBR4-205ENST00000417040 CD200P41217 278 aa10.84□□□□□ -0.67
UBR4-205ENST00000417040 VEGFBP49765 207 aa10.84□□□□□ -0.67
UBR4-205ENST00000417040 RAC1P63000 192 aa10.84□□□□□ -0.67
UBR4-205ENST00000417040 FAM209AQ5JX71 171 aa10.84□□□□□ -0.67
UBR4-205ENST00000417040 HMGCLL1Q8TB92 370 aa10.84□□□□□ -0.67
UBR4-205ENST00000417040 V9GYH0 126 aa10.84□□□□□ -0.67
UBR4-205ENST00000417040 LAMB1P07942 1786 aa10.84□□□□□ -0.67
UBR4-205ENST00000417040 FMODQ06828 376 aa10.84□□□□□ -0.67
UBR4-205ENST00000417040 ZNF383Q8NA42 475 aa10.84□□□□□ -0.67
UBR4-205ENST00000417040 DEFB108AA8MXU0 73 aa10.83□□□□□ -0.68
UBR4-205ENST00000417040 OR3A4PP47883 348 aa10.83□□□□□ -0.68
UBR4-205ENST00000417040 RPS4XP62701 263 aaKnown RBP10.83□□□□□ -0.68
UBR4-205ENST00000417040 MRPS21P82921 87 aaKnown RBP10.83□□□□□ -0.68
UBR4-205ENST00000417040 ELAVL1Q15717 326 aaKnown RBP10.83□□□□□ -0.68
UBR4-205ENST00000417040 FFAR4Q5NUL3 377 aa10.83□□□□□ -0.68
UBR4-205ENST00000417040 MRGPREQ86SM8 312 aa10.83□□□□□ -0.68
UBR4-205ENST00000417040 BCL7CQ8WUZ0 217 aaPredicted RBP10.83□□□□□ -0.68
UBR4-205ENST00000417040 ABHD1Q96SE0 405 aa10.83□□□□□ -0.68
UBR4-205ENST00000417040 DOK1Q99704 481 aa10.83□□□□□ -0.68
UBR4-205ENST00000417040 LRFN3Q9BTN0 628 aa10.83□□□□□ -0.68
UBR4-205ENST00000417040 ADAT1Q9BUB4 502 aaKnown RBP10.83□□□□□ -0.68
UBR4-205ENST00000417040 DCAF16Q9NXF7 216 aa10.83□□□□□ -0.68
UBR4-205ENST00000417040 GOLT1BQ9Y3E0 138 aa10.83□□□□□ -0.68
UBR4-205ENST00000417040 BMPR1BO00238 502 aa10.83□□□□□ -0.68
UBR4-205ENST00000417040 IGLV3-25P01717 112 aa10.83□□□□□ -0.68
UBR4-205ENST00000417040 ICAM2P13598 275 aa10.83□□□□□ -0.68
UBR4-205ENST00000417040 WNT3P56703 355 aa10.83□□□□□ -0.68
UBR4-205ENST00000417040 NUBPLQ8TB37 319 aa10.83□□□□□ -0.68
UBR4-205ENST00000417040 ACY3Q96HD9 319 aa10.83□□□□□ -0.68
UBR4-205ENST00000417040 TBPP20226 339 aa10.83□□□□□ -0.68
UBR4-205ENST00000417040 CYB561P49447 251 aa10.83□□□□□ -0.68
UBR4-205ENST00000417040 INSM1Q01101 510 aaPredicted RBP10.83□□□□□ -0.68
UBR4-205ENST00000417040 DMWDQ09019 674 aa10.83□□□□□ -0.68
UBR4-205ENST00000417040 ZNF77Q15935 545 aa10.83□□□□□ -0.68
UBR4-205ENST00000417040 ZNF574Q6ZN55 896 aaPredicted RBP10.83□□□□□ -0.68
UBR4-205ENST00000417040 AGBL5Q8NDL9 886 aa10.83□□□□□ -0.68
UBR4-205ENST00000417040 BCL2L10Q9HD36 194 aa10.83□□□□□ -0.68
UBR4-205ENST00000417040 F12P00748 615 aaPredicted RBP10.83□□□□□ -0.68
UBR4-205ENST00000417040 MNX1P50219 401 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms