RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 PRDM7Q9NQW5 492 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 CHRNA9Q9UGM1 479 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 SLC22A13Q9Y226 551 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 PPIL1Q9Y3C6 166 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 GPR137BO60478 399 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 IGHA1P01876 353 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 GLI4P10075 376 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 LIMK1P53667 647 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 H3F3AP84243 136 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 UBE2V2Q15819 145 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 PRTGQ2VWP7 1150 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 AGBL4Q5VU57 503 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 ZNF793Q6ZN11 406 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 CA13Q8N1Q1 262 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 MRPL38Q96DV4 380 aaKnown RBP14.46□□□□□ -0.09
NPHP3-201ENST00000337331 MISP3Q96FF7 219 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 ZNF681Q96N22 645 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 KLF2Q9Y5W3 355 aaPredicted RBP14.46□□□□□ -0.09
NPHP3-201ENST00000337331 DSPPQ9NZW4 1301 aa14.46□□□□□ -0.1
NPHP3-201ENST00000337331 A0A0A6YYD5 115 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 A0A0U1RQK1 487 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 NPIPB9F8W1W9 429 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 IL2RGP31785 369 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 SLC25A30Q5SVS4 291 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 DHRS11Q6UWP2 260 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 CARHSP1Q9Y2V2 147 aaKnown RBP14.45□□□□□ -0.1
NPHP3-201ENST00000337331 TAAR5O14804 337 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 GEMIN2O14893 280 aaKnown RBP14.45□□□□□ -0.1
NPHP3-201ENST00000337331 PRAMEF4O60810 478 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 CD27P26842 260 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 SLC10A1Q14973 349 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 ZNF684Q5T5D7 378 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 CD300LDQ6UXZ3 194 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 ELSPBP1Q96BH3 223 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 C14orf144Q96I85 54 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 TEX101Q9BY14 249 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 ZDHHC8Q9ULC8 765 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 FOCADQ5VW36 1801 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 PMS2P1A4D2B8 440 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 MOSPD3O75425 235 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 GCH1P30793 250 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 TMEM37Q8WXS4 190 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 WFDC6Q9BQY6 131 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 MRPS18AQ9NVS2 196 aaKnown RBP14.45□□□□□ -0.1
NPHP3-201ENST00000337331 LOC390937A0A1W2PQ73 354 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 ANKUB1A6NFN9 424 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 ZNF727A8MUV8 499 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 PPP5D1E7EU14 171 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 MSTNO14793 375 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 ALOX12BO75342 701 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 PTBP3O95758 552 aaKnown RBP14.45□□□□□ -0.1
NPHP3-201ENST00000337331 IGHV2-70P01814 119 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 ID4P47928 161 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 IKZF1Q13422 519 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 DMRTA1Q5VZB9 504 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 FAM210BQ96KR6 192 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 OR14J1Q9UGF5 321 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 MMP17Q9ULZ9 603 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 TMEM184BQ9Y519 407 aaPredicted RBP14.45□□□□□ -0.1
NPHP3-201ENST00000337331 V9GYS6 101 aa14.45□□□□□ -0.1
NPHP3-201ENST00000337331 C20orf202A1L168 122 aa14.44□□□□□ -0.1
NPHP3-201ENST00000337331 ZFPL1O95159 310 aa14.44□□□□□ -0.1
NPHP3-201ENST00000337331 SSR4P51571 173 aa14.44□□□□□ -0.1
NPHP3-201ENST00000337331 ARG2P78540 354 aa14.44□□□□□ -0.1
NPHP3-201ENST00000337331 MFGE8Q08431 387 aaPredicted RBP14.44□□□□□ -0.1
NPHP3-201ENST00000337331 ZNF345Q14585 488 aa14.44□□□□□ -0.1
NPHP3-201ENST00000337331 DMKNQ6E0U4 476 aaPredicted RBP14.44□□□□□ -0.1
NPHP3-201ENST00000337331 TMEM123Q8N131 208 aa14.44□□□□□ -0.1
NPHP3-201ENST00000337331 ANKRD10Q9NXR5 420 aa14.44□□□□□ -0.1
NPHP3-201ENST00000337331 BOKQ9UMX3 212 aaPredicted RBP14.44□□□□□ -0.1
NPHP3-201ENST00000337331 TRPM6Q9BX84 2022 aa14.44□□□□□ -0.1
NPHP3-201ENST00000337331 ABHD16AO95870 558 aa14.44□□□□□ -0.1
NPHP3-201ENST00000337331 CTGFP29279 349 aa14.44□□□□□ -0.1
NPHP3-201ENST00000337331 ERVK-16P61578 105 aa14.44□□□□□ -0.1
NPHP3-201ENST00000337331 ADIRFQ15847 76 aa14.44□□□□□ -0.1
NPHP3-201ENST00000337331 OGFOD3Q6PK18 319 aa14.44□□□□□ -0.1
NPHP3-201ENST00000337331 SLC35G3Q8N808 338 aa14.44□□□□□ -0.1
NPHP3-201ENST00000337331 CNEP1R1Q8N9A8 125 aa14.44□□□□□ -0.1
NPHP3-201ENST00000337331 CLEC1AQ8NC01 280 aa14.44□□□□□ -0.1
NPHP3-201ENST00000337331 GJC3Q8NFK1 279 aa14.44□□□□□ -0.1
NPHP3-201ENST00000337331 KCNK15Q9H427 330 aa14.44□□□□□ -0.1
NPHP3-201ENST00000337331 RTTNQ86VV8 2226 aa14.44□□□□□ -0.1
NPHP3-201ENST00000337331 CDC42EP2O14613 210 aa14.44□□□□□ -0.1
NPHP3-201ENST00000337331 ZNF728P0DKX0 622 aa14.44□□□□□ -0.1
NPHP3-201ENST00000337331 IRF2P14316 349 aa14.44□□□□□ -0.1
NPHP3-201ENST00000337331 MDKP21741 143 aaPredicted RBP14.44□□□□□ -0.1
NPHP3-201ENST00000337331 ATPAF1Q5TC12 328 aaPredicted RBP14.44□□□□□ -0.1
NPHP3-201ENST00000337331 CMTM3Q96MX0 182 aa14.44□□□□□ -0.1
NPHP3-201ENST00000337331 ZNF426Q9BUY5 554 aa14.44□□□□□ -0.1
NPHP3-201ENST00000337331 GCM1Q9NP62 436 aa14.44□□□□□ -0.1
NPHP3-201ENST00000337331 ADAP1O75689 374 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 TRGC2P03986 189 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 HRH1P35367 487 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 LIMS1P48059 325 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 EMDP50402 254 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 HNF4GQ14541 408 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 TMEM215Q68D42 235 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 ZNF813Q6ZN06 617 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 DDA1Q9BW61 102 aa14.43□□□□□ -0.1
NPHP3-201ENST00000337331 WWTR1Q9GZV5 400 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms