RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 TCTN1Q2MV58 587 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 OR2T27Q8NH04 317 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 OR51F2Q8NH61 342 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 BCL2L2Q92843 193 aaPredicted RBP5.93□□□□□ -1.46
ZNF540-201ENST00000316433 MCHR2Q969V1 340 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 NUS1Q96E22 293 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 KLHDC3Q9BQ90 382 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 LMF2Q9BU23 707 aaKnown RBP5.93□□□□□ -1.46
ZNF540-201ENST00000316433 PBDC1Q9BVG4 233 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 ANGPTL4Q9BY76 406 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 MRPL13Q9BYD1 178 aaKnown RBP5.93□□□□□ -1.46
ZNF540-201ENST00000316433 CNTNAP3Q9BZ76 1288 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 CHRNA10Q9GZZ6 450 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 CDH20Q9HBT6 801 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 GPR35Q9HC97 309 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.93□□□□□ -1.46
ZNF540-201ENST00000316433 KLHL28Q9NXS3 571 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 PLA2G2EQ9NZK7 142 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 CXXC1Q9P0U4 656 aaPredicted RBP5.93□□□□□ -1.46
ZNF540-201ENST00000316433 ZNF443Q9Y2A4 671 aaPredicted RBP5.93□□□□□ -1.46
ZNF540-201ENST00000316433 MRPS2Q9Y399 296 aaKnown RBP5.93□□□□□ -1.46
ZNF540-201ENST00000316433 COX11Q9Y6N1 276 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 LOC100289279A0A1B0GTE1 492 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 ZNF705FA8MVS1 300 aaPredicted RBP5.92□□□□□ -1.46
ZNF540-201ENST00000316433 H3BQ15 152 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 PQBP1O60828 265 aaKnown RBP5.92□□□□□ -1.46
ZNF540-201ENST00000316433 MMP23AO75900 390 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 GLSO94925 669 aaPredicted RBP5.92□□□□□ -1.46
ZNF540-201ENST00000316433 KNG1P01042 644 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 KLK1P06870 262 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 ZNF705DP0CH99 300 aaPredicted RBP5.92□□□□□ -1.46
ZNF540-201ENST00000316433 ZNF705BP0CI00 300 aaPredicted RBP5.92□□□□□ -1.46
ZNF540-201ENST00000316433 FHITP49789 147 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 RIPPLY3P57055 190 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 RPS20P60866 119 aaKnown RBP5.92□□□□□ -1.46
ZNF540-201ENST00000316433 RPS15P62841 145 aaKnown RBP5.92□□□□□ -1.46
ZNF540-201ENST00000316433 IGLV3-21P80748 117 aaPredicted RBP5.92□□□□□ -1.46
ZNF540-201ENST00000316433 HTD2P86397 168 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 ODF1Q14990 250 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 EMC4Q5J8M3 183 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 RPL7L1Q6DKI1 246 aaKnown RBP5.92□□□□□ -1.46
ZNF540-201ENST00000316433 PWWP2BQ6NUJ5 590 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 ABHD17CQ6PCB6 329 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 FBXW12Q6X9E4 464 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 ZNF101Q8IZC7 436 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 NOXO1Q8NFA2 376 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 VN1R2Q8NFZ6 395 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 OR4D5Q8NGN0 318 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 OR4X1Q8NH49 305 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 MFSD8Q8NHS3 518 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 DNASE2BQ8WZ79 361 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 TMEM106AQ96A25 262 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 CTHRC1Q96CG8 243 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 CIB3Q96Q77 187 aaPredicted RBP5.92□□□□□ -1.46
ZNF540-201ENST00000316433 TBX5Q99593 518 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 SLC6A7Q99884 636 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 SLC25A21Q9BQT8 299 aaPredicted RBP5.92□□□□□ -1.46
ZNF540-201ENST00000316433 NDC1Q9BTX1 674 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 RNF126Q9BV68 326 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 AICDAQ9GZX7 198 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 ZNF552Q9H707 407 aaPredicted RBP5.92□□□□□ -1.46
ZNF540-201ENST00000316433 SLC2A4RGQ9NR83 387 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 ADAMTS9Q9P2N4 1935 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 ST3GAL6Q9Y274 331 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 TRAV30A0A087WSZ9 112 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 DAPL1A0PJW8 107 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 IFITM5A6NNB3 132 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 C9orf172C9J069 976 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 RAB27BO00194 218 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 WDR1O75083 606 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 CEACAM1P13688 526 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 FOLR1P15328 257 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 LMO1P25800 156 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 PPICP45877 212 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 FLT3LGP49771 235 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 PDLIM4P50479 330 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 MANFP55145 182 aaKnown RBP5.92□□□□□ -1.46
ZNF540-201ENST00000316433 SLAQ13239 276 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 PARS2Q7L3T8 475 aaKnown RBP5.92□□□□□ -1.46
ZNF540-201ENST00000316433 SPRED2Q7Z698 418 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 ZNF595Q8IYB9 648 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 CMTM8Q8IZV2 173 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 EXD3Q8N9H8 876 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 PINX1Q96BK5 328 aaKnown RBP5.92□□□□□ -1.46
ZNF540-201ENST00000316433 ANKRD9Q96BM1 317 aaPredicted RBP5.92□□□□□ -1.46
ZNF540-201ENST00000316433 MS4A6EQ96DS6 147 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 SEH1LQ96EE3 360 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 TBX15Q96SF7 602 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 ZNF587Q96SQ5 575 aaPredicted RBP5.92□□□□□ -1.46
ZNF540-201ENST00000316433 ATG10Q9H0Y0 220 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 FBLN5Q9UBX5 448 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 SMPXQ9UHP9 88 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 FOXD3Q9UJU5 478 aaPredicted RBP5.92□□□□□ -1.46
ZNF540-201ENST00000316433 RAB22AQ9UL26 194 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 PPIAL4AQ9Y536 164 aa5.92□□□□□ -1.46
ZNF540-201ENST00000316433 TRBV5-7A0A0A0MS05 114 aa5.91□□□□□ -1.46
ZNF540-201ENST00000316433 A0A1B0GV72 72 aa5.91□□□□□ -1.46
ZNF540-201ENST00000316433 TMEM202A6NGA9 273 aa5.91□□□□□ -1.46
ZNF540-201ENST00000316433 AQP7P3A6NL99 342 aa5.91□□□□□ -1.46
ZNF540-201ENST00000316433 TMPRSS11DO60235 418 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms