RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 KLHL28Q9NXS3 571 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 VNN3Q9NY84 501 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 GNG12Q9UBI6 72 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 PRODH2Q9UF12 536 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 RNF24Q9Y225 148 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 RNF6Q9Y252 685 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 PRELID1Q9Y255 219 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 MRPS7Q9Y2R9 242 aaKnown RBP3.2□□□□□ -1.9
SMCO3-201ENST00000316048 IFT52Q9Y366 437 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 NAALAD2Q9Y3Q0 740 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 MYO9BQ13459 2157 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 TRABD2BA6NFA1 517 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 SHISA9B4DS77 424 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 C4orf51C9J302 202 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 ZNF701M0R085 212 aaPredicted RBP3.19□□□□□ -1.9
SMCO3-201ENST00000316048 FAAHO00519 579 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 ARHGEF9O43307 516 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 MPZL2O60487 215 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 GALR3O60755 368 aaPredicted RBP3.19□□□□□ -1.9
SMCO3-201ENST00000316048 B4GALT2O60909 372 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 LGI1O95970 557 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 MELTFP08582 738 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 IFI6P09912 130 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 CPMP14384 443 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 PVRP15151 417 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 POLR2IP36954 125 aaKnown RBP3.19□□□□□ -1.9
SMCO3-201ENST00000316048 IFNGR2P38484 337 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 PPT1P50897 306 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 RAB38P57729 211 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 BIKQ13323 160 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 GANABQ14697 944 aaKnown RBP3.19□□□□□ -1.9
SMCO3-201ENST00000316048 ATXN7L3Q14CW9 347 aaPredicted RBP3.19□□□□□ -1.9
SMCO3-201ENST00000316048 EXOC3L2Q2M3D2 409 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.19□□□□□ -1.9
SMCO3-201ENST00000316048 ZNF613Q6PF04 617 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 ZNF600Q6ZNG1 722 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 ANKRD37Q7Z713 158 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 CDH26Q8IXH8 852 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 BPIFB6Q8NFQ5 453 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 OR2T33Q8NG76 320 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 OR5D16Q8NGK9 328 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 ZNF420Q8TAQ5 688 aaPredicted RBP3.19□□□□□ -1.9
SMCO3-201ENST00000316048 NPRL2Q8WTW4 380 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 CLDN23Q96B33 292 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 MS4A4EQ96PG1 132 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 OR7D2Q96RA2 312 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 GABARAPL3Q9BY60 117 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 CCDC90BQ9GZT6 254 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 ARMC7Q9H6L4 198 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 JPT2Q9H910 190 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 CXorf21Q9HAI6 301 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 NMNAT1Q9HAN9 279 aaPredicted RBP3.19□□□□□ -1.9
SMCO3-201ENST00000316048 CCNB1IP1Q9NPC3 277 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 NTNG1Q9Y2I2 539 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 CHD9Q3L8U1 2897 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 IGHV3OR16-10A0A075B7F0 116 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 CHST10O43529 356 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 OR10H3O60404 316 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 CTNSO60931 367 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 UGT2B17O75795 530 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 NUDT14O95848 222 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 ALOX5P09917 674 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 SLC35E2P0CK97 266 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 RNH1P13489 461 aaKnown RBP3.19□□□□□ -1.9
SMCO3-201ENST00000316048 POU2F1P14859 743 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 GSTM3P21266 225 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 PTBP1P26599 531 aaKnown RBP eCLIP3.19□□□□□ -1.9
SMCO3-201ENST00000316048 GGT2P36268 569 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 CAPZBP47756 277 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 CSNK1EP49674 416 aaKnown RBP3.19□□□□□ -1.9
SMCO3-201ENST00000316048 RGS19P49795 217 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 CRISP1P54107 249 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 CDC42P60953 191 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 ERVK11-1P61568 191 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 RPL8P62917 257 aaKnown RBP3.19□□□□□ -1.9
SMCO3-201ENST00000316048 ST3GAL3Q11203 375 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 STX4Q12846 297 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 PMS2P3Q13401 168 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 FAM53BQ14153 422 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 MAD2L1BPQ15013 274 aaPredicted RBP3.19□□□□□ -1.9
SMCO3-201ENST00000316048 NEDD8Q15843 81 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 ARHGAP11BQ3KRB8 267 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 C1orf185Q5T7R7 199 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 TMEM17Q86X19 198 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 CLVS1Q8IUQ0 354 aaPredicted RBP3.19□□□□□ -1.9
SMCO3-201ENST00000316048 ERI1Q8IV48 349 aaKnown RBP3.19□□□□□ -1.9
SMCO3-201ENST00000316048 CA13Q8N1Q1 262 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 ABHD12Q8N2K0 398 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 OR2L13Q8N349 312 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 CDRT4Q8N9R6 151 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 OR6T1Q8NGN1 323 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 OR52P1PQ8NH57 321 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 LILRB4Q8NHJ6 448 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 MYDGFQ969H8 173 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 SLC38A4Q969I6 547 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 Q96MT0 163 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 STACQ99469 402 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 PITX2Q99697 317 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 ATF6BQ99941 703 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 MCRIP2Q9BUT9 160 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms