RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 PTRH1Q86Y79 214 aaKnown RBP10.96□□□□□ -0.66
PCF11-201ENST00000298281 ZNF391Q9UJN7 358 aa10.96□□□□□ -0.66
PCF11-201ENST00000298281 TRAV34A0A0B4J273 112 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 IGKV3OR2-268A0A0C4DH90 116 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 PPP1R17O96001 155 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 DOLPP1Q86YN1 238 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 UBE2FQ969M7 185 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 TM4SF18Q96CE8 201 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 RAB1BQ9H0U4 201 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 DHCR7Q9UBM7 475 aaKnown RBP10.95□□□□□ -0.66
PCF11-201ENST00000298281 AMMECR1Q9Y4X0 333 aaPredicted RBP10.95□□□□□ -0.66
PCF11-201ENST00000298281 ZGRF1Q86YA3 2104 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 IGHV3-15A0A0B4J1V0 119 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 HSPB2A8KAH6 182 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 K7ERU9 68 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 TCRBP04435 133 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 DAPP51397 102 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 PCBP4P57723 403 aaKnown RBP10.95□□□□□ -0.66
PCF11-201ENST00000298281 HSPB2Q16082 182 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 CYHR1Q6ZMK1 362 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 CALHM3Q86XJ0 350 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 ZNF738Q8NE65 137 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 SHISA4Q96DD7 197 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 TRAPPC1Q9Y5R8 145 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 CDX4O14627 284 aaPredicted RBP10.95□□□□□ -0.66
PCF11-201ENST00000298281 OR2B8PP59922 312 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 SPCS3P61009 180 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 TAS1R1Q7RTX1 841 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 SLC36A1Q7Z2H8 476 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 NRARPQ7Z6K4 114 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 ZNF561Q8N587 486 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 RANGRFQ9HD47 186 aaPredicted RBP10.95□□□□□ -0.66
PCF11-201ENST00000298281 THYN1Q9P016 225 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 THAP10Q9P2Z0 257 aaPredicted RBP10.95□□□□□ -0.66
PCF11-201ENST00000298281 FLVCR1Q9Y5Y0 555 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 UBR2Q8IWV8 1755 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 M0R2Z0 102 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 FAM3AP98173 230 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 SPCS2Q15005 226 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 FCRL6Q6DN72 434 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 FAM122BQ7Z309 247 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 GDF7Q7Z4P5 450 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 NEURL2Q9BR09 285 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 CSAG2Q9Y5P2 127 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 TAAR5O14804 337 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 ZNF787Q6DD87 383 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 ARFGAP1Q8N6T3 406 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 WDR13Q9H1Z4 485 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 CLEC18AA5D8T8 446 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 PPP6CO00743 305 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 PRKRAO75569 313 aaKnown RBP10.95□□□□□ -0.66
PCF11-201ENST00000298281 HINT1P49773 126 aaPredicted RBP10.95□□□□□ -0.66
PCF11-201ENST00000298281 NCR3LG1Q68D85 454 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 CLEC18CQ8NCF0 446 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 SMIM7Q9BQ49 75 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 IL17BQ9UHF5 180 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 KCNG2Q9UJ96 466 aa10.95□□□□□ -0.66
PCF11-201ENST00000298281 MN1Q10571 1320 aaPredicted RBP10.95□□□□□ -0.66
PCF11-201ENST00000298281 RPL27P61353 136 aaKnown RBP10.94□□□□□ -0.66
PCF11-201ENST00000298281 RPS25P62851 125 aaKnown RBP10.94□□□□□ -0.66
PCF11-201ENST00000298281 LSRQ86X29 649 aaPredicted RBP10.94□□□□□ -0.66
PCF11-201ENST00000298281 OR52I1Q8NGK6 324 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 OR2A14Q96R47 310 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 CXorf36Q9H7Y0 433 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 LAMP3Q9UQV4 416 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 ST8SIA3O43173 380 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 ZNF749O43361 778 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 MPDU1O75352 247 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 GPX2P18283 190 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 NKAIN1Q4KMZ8 207 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 XKR7Q5GH72 579 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 LILRB4Q8NHJ6 448 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 CCL17Q92583 94 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 AKR7A3O95154 331 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 TBXA2RP21731 343 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 TEAD1P28347 426 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 SHC1P29353 583 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 PIGAP37287 484 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 PRRX1P54821 245 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 EMP1P54849 157 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 BTG1P62324 171 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 RNF212Q495C1 297 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 TOR2AQ5JU69 321 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 LAX1Q8IWV1 398 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 MARC2Q969Z3 335 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 CD276Q5ZPR3 534 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 GLIPR1L1Q6UWM5 242 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 GALNT16Q8N428 558 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 SFRP2Q96HF1 295 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 TMEM56Q96MV1 263 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 OR5M11Q96RB7 305 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 CHST8Q9H2A9 424 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 UBQLN3Q9H347 655 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 KLF13Q9Y2Y9 288 aaPredicted RBP10.94□□□□□ -0.66
PCF11-201ENST00000298281 COX7A1P24310 79 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 B2MP61769 119 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 COL19A1Q14993 1142 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 SPATA46Q5T0L3 261 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 GNPNAT1Q96EK6 184 aaPredicted RBP10.94□□□□□ -0.66
PCF11-201ENST00000298281 PLPPR2Q96GM1 343 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms