RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 UBALD1Q8TB05 177 aa15.51■□□□□ 0.07
SHANK1-201ENST00000293441 MYOZ1Q9NP98 299 aaPredicted RBP15.51■□□□□ 0.07
SHANK1-201ENST00000293441 ZNF331Q9NQX6 463 aaPredicted RBP15.51■□□□□ 0.07
SHANK1-201ENST00000293441 PLEKHB1Q9UF11 243 aaPredicted RBP15.51■□□□□ 0.07
SHANK1-201ENST00000293441 SOX8P57073 446 aa15.51■□□□□ 0.07
SHANK1-201ENST00000293441 MICBQ29980 383 aa15.51■□□□□ 0.07
SHANK1-201ENST00000293441 LYPD8Q6UX82 237 aa15.51■□□□□ 0.07
SHANK1-201ENST00000293441 SLC36A1Q7Z2H8 476 aa15.51■□□□□ 0.07
SHANK1-201ENST00000293441 OR4F5Q8NH21 305 aa15.51■□□□□ 0.07
SHANK1-201ENST00000293441 OTOSQ8NHW6 89 aa15.51■□□□□ 0.07
SHANK1-201ENST00000293441 OR4F4Q96R69 305 aa15.51■□□□□ 0.07
SHANK1-201ENST00000293441 AUNIPQ9H7T9 357 aa15.51■□□□□ 0.07
SHANK1-201ENST00000293441 IGLV3-16A0A075B6K0 115 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 NKX2-2O95096 273 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 HOXD12P35452 270 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 BPIFB3P59826 476 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 ACOT6Q3I5F7 207 aaPredicted RBP15.5■□□□□ 0.07
SHANK1-201ENST00000293441 CRISPLD2Q9H0B8 497 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 A0A0A6YYJ9 748 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 TMEM30CPA0ZSE6 113 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 MEX3AA1L020 520 aaKnown RBP15.5■□□□□ 0.07
SHANK1-201ENST00000293441 HOXC4P09017 264 aaPredicted RBP15.5■□□□□ 0.07
SHANK1-201ENST00000293441 TOR2AQ5JU69 321 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 OR8U1Q8NH10 309 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 LHX9Q9NQ69 397 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 TNFRSF19Q9NS68 423 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 TRIP11Q15643 1979 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 MAGEB1P43366 347 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 TMEM211Q6ICI0 200 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 LILRB4Q8NHJ6 448 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 ZFP64Q9NPA5 681 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 SLC6A13Q9NSD5 602 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 A0A0B4J2E0 115 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 A0A1B0GX12 115 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 TMIGD3P0DMS9 266 aaPredicted RBP15.5■□□□□ 0.07
SHANK1-201ENST00000293441 CCL2P13500 99 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 TPBGQ13641 420 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 RAB35Q15286 201 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 HFEQ30201 348 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 SLC39A7Q92504 469 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 ALG14Q96F25 216 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 BTF3L4Q96K17 158 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 FGF20Q9NP95 211 aaPredicted RBP15.5■□□□□ 0.07
SHANK1-201ENST00000293441 SRP14P37108 136 aaKnown RBP15.5■□□□□ 0.07
SHANK1-201ENST00000293441 DHODHQ02127 395 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 MOB3AQ96BX8 217 aa15.5■□□□□ 0.07
SHANK1-201ENST00000293441 COX7A2P2O60397 106 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 PRR7Q8TB68 274 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 DERL3Q96Q80 235 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 OR2A5Q96R48 311 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 ACTR3CQ9C0K3 210 aaPredicted RBP15.49■□□□□ 0.07
SHANK1-201ENST00000293441 MMP25Q9NPA2 562 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 KRBOX1C9JBD0 128 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 GIPP09681 153 aaPredicted RBP15.49■□□□□ 0.07
SHANK1-201ENST00000293441 METTL15P1P0C7V9 234 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 EPHA2P29317 976 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 GNG3P63215 75 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 SLC25A35Q3KQZ1 300 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 FAM27D1Q5T7N8 215 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 B3GNTL1Q67FW5 361 aaPredicted RBP15.49■□□□□ 0.07
SHANK1-201ENST00000293441 SCARB1Q8WTV0 552 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 MCHR2Q969V1 340 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 PRRX2Q99811 253 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 TMEM123Q8N131 208 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 OR4Q3Q8NH05 313 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 TIMM9Q9Y5J7 89 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 V9GYS6 101 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 KIAA1958Q8N8K9 716 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 CLDN23Q96B33 292 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 SLC26A1Q9H2B4 701 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 SMCHD1A6NHR9 2005 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 MT-ND4LP03901 98 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 FUT7Q11130 342 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 ZNF774Q6NX45 483 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 FAM122CQ6P4D5 195 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 BHLHA9Q7RTU4 235 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 NECAP1Q8NC96 275 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 EXTL1Q92935 676 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 ACY3Q96HD9 319 aa15.49■□□□□ 0.07
SHANK1-201ENST00000293441 OR5H15A6NDH6 313 aa15.48■□□□□ 0.07
SHANK1-201ENST00000293441 OR5H14A6NHG9 310 aa15.48■□□□□ 0.07
SHANK1-201ENST00000293441 OR5H1A6NKK0 313 aa15.48■□□□□ 0.07
SHANK1-201ENST00000293441 PLAC9Q5JTB6 97 aa15.48■□□□□ 0.07
SHANK1-201ENST00000293441 DNAJB12Q9NXW2 375 aaKnown RBP15.48■□□□□ 0.07
SHANK1-201ENST00000293441 ZNF835Q9Y2P0 537 aa15.48■□□□□ 0.07
SHANK1-201ENST00000293441 RER1O15258 196 aa15.48■□□□□ 0.07
SHANK1-201ENST00000293441 OR4E1P0C645 316 aa15.48■□□□□ 0.07
SHANK1-201ENST00000293441 LFNGQ8NES3 379 aa15.48■□□□□ 0.07
SHANK1-201ENST00000293441 TCEAL7Q9BRU2 100 aa15.48■□□□□ 0.07
SHANK1-201ENST00000293441 FOXJ3Q9UPW0 622 aa15.48■□□□□ 0.07
SHANK1-201ENST00000293441 HYAL3O43820 417 aaPredicted RBP15.48■□□□□ 0.07
SHANK1-201ENST00000293441 GUCA2AQ02747 115 aa15.48■□□□□ 0.07
SHANK1-201ENST00000293441 TMEM108Q6UXF1 575 aa15.48■□□□□ 0.07
SHANK1-201ENST00000293441 OR5B3Q8NH48 314 aa15.48■□□□□ 0.07
SHANK1-201ENST00000293441 ZNF638Q14966 1978 aaKnown RBP15.48■□□□□ 0.07
SHANK1-201ENST00000293441 DEFB108AA8MXU0 73 aa15.48■□□□□ 0.07
SHANK1-201ENST00000293441 SLC31A2O15432 143 aa15.48■□□□□ 0.07
SHANK1-201ENST00000293441 CYC1P08574 325 aa15.48■□□□□ 0.07
SHANK1-201ENST00000293441 GALNSP34059 522 aa15.48■□□□□ 0.07
SHANK1-201ENST00000293441 C1orf53Q5VUE5 145 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms