RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 CST4P01036 141 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 ZNF735P0CB33 412 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 SELLP14151 372 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 DDTP30046 118 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 ARL4DP49703 201 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 C20orf196Q8IYI0 205 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 PIGTQ969N2 578 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 MRPL24Q96A35 216 aaKnown RBP14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 MRPL38Q96DV4 380 aaKnown RBP14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 ZNF426Q9BUY5 554 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 PLEKHJ1Q9NW61 149 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 FGF16O43320 207 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 MMP9P14780 707 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 EPHA1P21709 976 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 RBP2P50120 134 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 NHLH2Q02577 135 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 PLAURQ03405 335 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 MST1LQ2TV78 715 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 RNF144BQ7Z419 303 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 MRPL41Q8IXM3 137 aaKnown RBP14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 NEK7Q8TDX7 302 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 ADAMTS17Q8TE56 1095 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 ADAMTS18Q8TE60 1221 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 OR1E3Q8WZA6 343 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 MARS2Q96GW9 593 aaKnown RBP14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 PRRX2Q99811 253 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 URM1Q9BTM9 101 aaKnown RBP14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 MYO7BQ6PIF6 2116 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 RAB27BO00194 218 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 ONECUT2O95948 504 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 FAM157CP0CG43 387 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 VSIG8P0DPA2 414 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 PNMTP11086 282 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 BCKDHBP21953 392 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 PPM1AP35813 382 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 OR3A4PP47883 348 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 GNMTQ14749 295 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 ZNF595Q8IYB9 648 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 SLC22A24Q8N4F4 322 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 STT3BQ8TCJ2 826 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 RNF128Q8TEB7 428 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 SLC35B3Q9H1N7 401 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 PADI1Q9ULC6 663 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 PRSS38A1L453 326 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 ZNF705FA8MVS1 300 aaPredicted RBP14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 HCRTR1O43613 425 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 ZNF705DP0CH99 300 aaPredicted RBP14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 ZNF705BP0CI00 300 aaPredicted RBP14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 SLC26A5P58743 744 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 MGAT2Q10469 447 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 TMEM244Q5VVB8 128 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 GGNBP1Q5YKI7 109 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 SAT2Q96F10 170 aaPredicted RBP14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 OR2A5Q96R48 311 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 NIPSNAP3BQ9BS92 247 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 MENTQ9BUN1 341 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 C5orf66Q9H5L9 145 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 CYTL1Q9NRR1 136 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 KIAA2026Q5HYC2 2103 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 SFT2D2O95562 160 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 HLA-DOBP13765 273 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 OR1D4P47884 311 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 MRPS34P82930 218 aaKnown RBP14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 EGR3Q06889 387 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 FAM57BQ71RH2 274 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 ZNF440Q8IYI8 595 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 GNG13Q9P2W3 67 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 B3GALT5Q9Y2C3 310 aa14.19□□□□□ -0.14
PRPF40B-201ENST00000261897 SHANK1Q9Y566 2161 aa14.18□□□□□ -0.14
PRPF40B-201ENST00000261897 PRSS37A4D1T9 235 aa14.18□□□□□ -0.14
PRPF40B-201ENST00000261897 NUDT19A8MXV4 375 aa14.18□□□□□ -0.14
PRPF40B-201ENST00000261897 SHISA8B8ZZ34 492 aa14.18□□□□□ -0.14
PRPF40B-201ENST00000261897 RPL23AP62750 156 aaKnown RBP14.18□□□□□ -0.14
PRPF40B-201ENST00000261897 GGTLC2Q14390 218 aa14.18□□□□□ -0.14
PRPF40B-201ENST00000261897 OR8G1Q15617 311 aa14.18□□□□□ -0.14
PRPF40B-201ENST00000261897 EEF1A1P5Q5VTE0 462 aa14.18□□□□□ -0.14
PRPF40B-201ENST00000261897 ZDHHC22Q8N966 263 aa14.18□□□□□ -0.14
PRPF40B-201ENST00000261897 MCHR2Q969V1 340 aa14.18□□□□□ -0.14
PRPF40B-201ENST00000261897 ZNF775Q96BV0 537 aaPredicted RBP14.18□□□□□ -0.14
PRPF40B-201ENST00000261897 TRBV5-7A0A0A0MS05 114 aa14.18□□□□□ -0.14
PRPF40B-201ENST00000261897 A0A0U1RQK1 487 aa14.18□□□□□ -0.14
PRPF40B-201ENST00000261897 LINC01553A4QN01 128 aa14.18□□□□□ -0.14
PRPF40B-201ENST00000261897 SCGB1D1O95968 90 aa14.18□□□□□ -0.14
PRPF40B-201ENST00000261897 ZNF880Q6PDB4 577 aa14.18□□□□□ -0.14
PRPF40B-201ENST00000261897 ZNF705AQ6ZN79 300 aaPredicted RBP14.18□□□□□ -0.14
PRPF40B-201ENST00000261897 THRSPQ92748 146 aa14.18□□□□□ -0.14
PRPF40B-201ENST00000261897 ADAT3Q96EY9 351 aaPredicted RBP14.18□□□□□ -0.14
PRPF40B-201ENST00000261897 HDHD3Q9BSH5 251 aaPredicted RBP14.18□□□□□ -0.14
PRPF40B-201ENST00000261897 UTS2O95399 124 aa14.17□□□□□ -0.14
PRPF40B-201ENST00000261897 ZNF77Q15935 545 aa14.17□□□□□ -0.14
PRPF40B-201ENST00000261897 PRTGQ2VWP7 1150 aa14.17□□□□□ -0.14
PRPF40B-201ENST00000261897 MISP3Q96FF7 219 aa14.17□□□□□ -0.14
PRPF40B-201ENST00000261897 C14orf144Q96I85 54 aa14.17□□□□□ -0.14
PRPF40B-201ENST00000261897 PACRGQ96M98 296 aaPredicted RBP14.17□□□□□ -0.14
PRPF40B-201ENST00000261897 GPHA2Q96T91 129 aa14.17□□□□□ -0.14
PRPF40B-201ENST00000261897 WWTR1Q9GZV5 400 aa14.17□□□□□ -0.14
PRPF40B-201ENST00000261897 UBQLN4Q9NRR5 601 aa14.17□□□□□ -0.14
PRPF40B-201ENST00000261897 C1orf123Q9NWV4 160 aa14.17□□□□□ -0.14
PRPF40B-201ENST00000261897 PISDQ9UG56 409 aa14.17□□□□□ -0.14
PRPF40B-201ENST00000261897 AK3Q9UIJ7 227 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms