RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 CHRDL1Q9BU40 450 aa10.4□□□□□ -0.74
LAMA4-201ENST00000230538 TMPRSS5Q9H3S3 457 aa10.4□□□□□ -0.74
LAMA4-201ENST00000230538 UBE2L5PA0A1B0GUS4 154 aa10.4□□□□□ -0.74
LAMA4-201ENST00000230538 TGOLN2O43493 480 aa10.4□□□□□ -0.74
LAMA4-201ENST00000230538 PIAS2O75928 621 aa10.4□□□□□ -0.74
LAMA4-201ENST00000230538 H3F3AP84243 136 aa10.4□□□□□ -0.74
LAMA4-201ENST00000230538 GUCA2AQ02747 115 aa10.4□□□□□ -0.74
LAMA4-201ENST00000230538 CEACAM16Q2WEN9 425 aa10.4□□□□□ -0.74
LAMA4-201ENST00000230538 TMEM196Q5HYL7 178 aa10.4□□□□□ -0.74
LAMA4-201ENST00000230538 ARHGEF39Q8N4T4 335 aa10.4□□□□□ -0.74
LAMA4-201ENST00000230538 SPACA9Q96E40 222 aaPredicted RBP10.4□□□□□ -0.74
LAMA4-201ENST00000230538 SH2D7A6NKC9 451 aaPredicted RBP10.4□□□□□ -0.74
LAMA4-201ENST00000230538 SPRY3O43610 288 aa10.4□□□□□ -0.74
LAMA4-201ENST00000230538 MOB3BQ86TA1 216 aa10.4□□□□□ -0.74
LAMA4-201ENST00000230538 OR52N4Q8NGI2 321 aa10.4□□□□□ -0.74
LAMA4-201ENST00000230538 PPP1R1CQ8WVI7 109 aa10.4□□□□□ -0.74
LAMA4-201ENST00000230538 DERL3Q96Q80 235 aa10.4□□□□□ -0.74
LAMA4-201ENST00000230538 ALKBH3Q96Q83 286 aaPredicted RBP10.4□□□□□ -0.74
LAMA4-201ENST00000230538 FBXO34Q9NWN3 711 aa10.4□□□□□ -0.74
LAMA4-201ENST00000230538 LRP12Q9Y561 859 aa10.4□□□□□ -0.74
LAMA4-201ENST00000230538 CCR2P41597 374 aa10.4□□□□□ -0.75
LAMA4-201ENST00000230538 CDK5Q00535 292 aa10.4□□□□□ -0.75
LAMA4-201ENST00000230538 CDC20Q12834 499 aa10.4□□□□□ -0.75
LAMA4-201ENST00000230538 ZBTB44Q8NCP5 570 aa10.4□□□□□ -0.75
LAMA4-201ENST00000230538 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.4□□□□□ -0.75
LAMA4-201ENST00000230538 APOBEC3DQ96AK3 386 aaPredicted RBP10.4□□□□□ -0.75
LAMA4-201ENST00000230538 POM121L2Q96KW2 1035 aa10.4□□□□□ -0.75
LAMA4-201ENST00000230538 PLSCR3Q9NRY6 295 aa10.4□□□□□ -0.75
LAMA4-201ENST00000230538 PLEKHB1Q9UF11 243 aaPredicted RBP10.4□□□□□ -0.75
LAMA4-201ENST00000230538 KCNE3Q9Y6H6 103 aa10.4□□□□□ -0.75
LAMA4-201ENST00000230538 BCL2L11O43521 198 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 SCO1O75880 301 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 SUMO1P63165 101 aaKnown RBP10.39□□□□□ -0.75
LAMA4-201ENST00000230538 ANKRD53Q8N9V6 530 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 OR2T6Q8NHC8 308 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 ASB13Q8WXK3 278 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 ZDHHC16Q969W1 377 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 TAAR9Q96RI9 348 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 LRRC61Q9BV99 259 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 SERPINE3A8MV23 424 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 OR2J3O76001 311 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 CLEC12BQ2HXU8 276 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 GFRALQ6UXV0 394 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 LRRTM1Q86UE6 522 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 ADPRHL1Q8NDY3 354 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 ACY3Q96HD9 319 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 FOXB1Q99853 325 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 KLK11Q9UBX7 282 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 CDK5RAP2Q96SN8 1893 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 ZNF320A2RRD8 509 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 OR2W5A6NFC9 320 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 SMIM17P0DL12 118 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 ZNF17P17021 662 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 ZBTB25P24278 435 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 LRRC10Q5BKY1 277 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 OR5M9Q8NGP3 310 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 OR1F12Q8NHA8 337 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 FGF14Q92915 247 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 MOB3AQ96BX8 217 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 KTI12Q96EK9 354 aaPredicted RBP10.39□□□□□ -0.75
LAMA4-201ENST00000230538 ST8SIA5O15466 376 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 HPP00738 406 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 MMP15P51511 669 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 SSX7Q7RTT5 188 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 ABI3BPQ7Z7G0 1075 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 CLDN23Q96B33 292 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 LRFN3Q9BTN0 628 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 DOCK2Q92608 1830 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 TMEM30CPA0ZSE6 113 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 LIMS3P0CW19 117 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 LIMS4P0CW20 117 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 MPGP29372 298 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 CNN1P51911 297 aaKnown RBP10.39□□□□□ -0.75
LAMA4-201ENST00000230538 B4GALNT1Q00973 533 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 ONECUT1Q9UBC0 465 aa10.39□□□□□ -0.75
LAMA4-201ENST00000230538 NCBP2LA6PVI3 153 aaKnown RBP10.38□□□□□ -0.75
LAMA4-201ENST00000230538 SHISA8B8ZZ34 492 aa10.38□□□□□ -0.75
LAMA4-201ENST00000230538 RAE1P78406 368 aaKnown RBP10.38□□□□□ -0.75
LAMA4-201ENST00000230538 PRDX4Q13162 271 aa10.38□□□□□ -0.75
LAMA4-201ENST00000230538 C11orf91Q3C1V1 193 aa10.38□□□□□ -0.75
LAMA4-201ENST00000230538 MAMSTRQ6ZN01 415 aa10.38□□□□□ -0.75
LAMA4-201ENST00000230538 GALNT16Q8N428 558 aa10.38□□□□□ -0.75
LAMA4-201ENST00000230538 SPEM1Q8N4L4 309 aa10.38□□□□□ -0.75
LAMA4-201ENST00000230538 NHLRC2Q8NBF2 726 aa10.38□□□□□ -0.75
LAMA4-201ENST00000230538 ADAT1Q9BUB4 502 aaKnown RBP10.38□□□□□ -0.75
LAMA4-201ENST00000230538 SLC6A13Q9NSD5 602 aa10.38□□□□□ -0.75
LAMA4-201ENST00000230538 ASPDHA6ND91 283 aa10.38□□□□□ -0.75
LAMA4-201ENST00000230538 LILRA5A6NI73 299 aa10.38□□□□□ -0.75
LAMA4-201ENST00000230538 NDUFB3O43676 98 aa10.38□□□□□ -0.75
LAMA4-201ENST00000230538 PTTG1IPP53801 180 aa10.38□□□□□ -0.75
LAMA4-201ENST00000230538 OR1C1Q15619 314 aa10.38□□□□□ -0.75
LAMA4-201ENST00000230538 GPR31O00270 319 aa10.38□□□□□ -0.75
LAMA4-201ENST00000230538 FAM27D1Q5T7N8 215 aa10.38□□□□□ -0.75
LAMA4-201ENST00000230538 OR2Z1Q8NG97 314 aa10.38□□□□□ -0.75
LAMA4-201ENST00000230538 CMBLQ96DG6 245 aa10.38□□□□□ -0.75
LAMA4-201ENST00000230538 WDR89Q96FK6 387 aaPredicted RBP10.38□□□□□ -0.75
LAMA4-201ENST00000230538 ADGRG7Q96K78 797 aa10.38□□□□□ -0.75
LAMA4-201ENST00000230538 ZNF785A8K8V0 405 aa10.38□□□□□ -0.75
LAMA4-201ENST00000230538 TMEM127O75204 238 aa10.38□□□□□ -0.75
LAMA4-201ENST00000230538 SULT1A3P0DMM9 295 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms