RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 PHF23Q9BUL5 403 aaPredicted RBP21.01■□□□□ 0.95
SCARB2-213ENST00000638680 TTC21AQ8NDW8 1320 aa21.01■□□□□ 0.95
SCARB2-213ENST00000638680 CHMP4BP1P59074 171 aa21.01■□□□□ 0.95
SCARB2-213ENST00000638680 STX8Q9UNK0 236 aa21.01■□□□□ 0.95
SCARB2-213ENST00000638680 ALDH1L1O75891 902 aa21.01■□□□□ 0.95
SCARB2-213ENST00000638680 HEATR3Q7Z4Q2 680 aa21.01■□□□□ 0.95
SCARB2-213ENST00000638680 PAG1Q9NWQ8 432 aa21.01■□□□□ 0.95
SCARB2-213ENST00000638680 POLR3AO14802 1390 aaPredicted RBP21■□□□□ 0.95
SCARB2-213ENST00000638680 EBAG9O00559 213 aa21■□□□□ 0.95
SCARB2-213ENST00000638680 CCDC121Q6ZUS5 278 aa21■□□□□ 0.95
SCARB2-213ENST00000638680 LDHCP07864 332 aa21■□□□□ 0.95
SCARB2-213ENST00000638680 CCDC129Q6ZRS4 1044 aa21■□□□□ 0.95
SCARB2-213ENST00000638680 ARID5AQ03989 594 aa21■□□□□ 0.95
SCARB2-213ENST00000638680 TTC31Q49AM3 519 aaPredicted RBP21■□□□□ 0.95
SCARB2-213ENST00000638680 TRIM75PA6NK02 468 aa21■□□□□ 0.95
SCARB2-213ENST00000638680 VAMP4O75379 141 aa21■□□□□ 0.95
SCARB2-213ENST00000638680 CYP7A1P22680 504 aa21■□□□□ 0.95
SCARB2-213ENST00000638680 DNAJC21Q5F1R6 531 aaKnown RBP21■□□□□ 0.95
SCARB2-213ENST00000638680 SAMM50Q9Y512 469 aa21■□□□□ 0.95
SCARB2-213ENST00000638680 KRT13P13646 458 aa20.99■□□□□ 0.95
SCARB2-213ENST00000638680 CCDC42Q96M95 316 aa20.99■□□□□ 0.95
SCARB2-213ENST00000638680 COPS6Q7L5N1 327 aa20.99■□□□□ 0.95
SCARB2-213ENST00000638680 PPP1R14CQ8TAE6 165 aa20.99■□□□□ 0.95
SCARB2-213ENST00000638680 CCDC97Q96F63 343 aaPredicted RBP20.99■□□□□ 0.95
SCARB2-213ENST00000638680 SELENOSQ9BQE4 189 aa20.99■□□□□ 0.95
SCARB2-213ENST00000638680 TEX13AQ9BXU3 409 aaPredicted RBP20.99■□□□□ 0.95
SCARB2-213ENST00000638680 TSPY3P0CV98 308 aa20.99■□□□□ 0.95
SCARB2-213ENST00000638680 TSPY8P0CW00 308 aa20.99■□□□□ 0.95
SCARB2-213ENST00000638680 ATP2B3Q16720 1220 aa20.99■□□□□ 0.95
SCARB2-213ENST00000638680 U2AF2P26368 475 aaKnown RBP eCLIP20.99■□□□□ 0.95
SCARB2-213ENST00000638680 CCDC6Q16204 474 aa20.99■□□□□ 0.95
SCARB2-213ENST00000638680 SLC9C2Q5TAH2 1124 aa20.99■□□□□ 0.95
SCARB2-213ENST00000638680 LMBR1LQ6UX01 489 aa20.99■□□□□ 0.95
SCARB2-213ENST00000638680 KSR2Q6VAB6 950 aa20.99■□□□□ 0.95
SCARB2-213ENST00000638680 SERPINA10Q9UK55 444 aa20.99■□□□□ 0.95
SCARB2-213ENST00000638680 ANKS4BQ8N8V4 417 aa20.98■□□□□ 0.95
SCARB2-213ENST00000638680 SBNO2Q9Y2G9 1366 aa20.98■□□□□ 0.95
SCARB2-213ENST00000638680 ZEB2O60315 1214 aa20.98■□□□□ 0.95
SCARB2-213ENST00000638680 TUBB4BP68371 445 aa20.98■□□□□ 0.95
SCARB2-213ENST00000638680 OTUD6BQ8N6M0 293 aa20.98■□□□□ 0.95
SCARB2-213ENST00000638680 PLVAPQ9BX97 442 aa20.98■□□□□ 0.95
SCARB2-213ENST00000638680 SMAP1Q8IYB5 467 aaPredicted RBP20.98■□□□□ 0.95
SCARB2-213ENST00000638680 C10orf67Q8IYJ2 551 aa20.98■□□□□ 0.95
SCARB2-213ENST00000638680 CCDC174Q6PII3 467 aa20.97■□□□□ 0.95
SCARB2-213ENST00000638680 ERMNQ8TAM6 284 aa20.97■□□□□ 0.95
SCARB2-213ENST00000638680 IFT81Q8WYA0 676 aa20.97■□□□□ 0.95
SCARB2-213ENST00000638680 CPA1P15085 419 aa20.97■□□□□ 0.95
SCARB2-213ENST00000638680 CEP57Q86XR8 500 aa20.97■□□□□ 0.95
SCARB2-213ENST00000638680 DDX12PQ92771 950 aa20.97■□□□□ 0.95
SCARB2-213ENST00000638680 HDXQ7Z353 690 aa20.97■□□□□ 0.95
SCARB2-213ENST00000638680 CD109Q6YHK3 1445 aa20.97■□□□□ 0.95
SCARB2-213ENST00000638680 ERO1AQ96HE7 468 aa20.97■□□□□ 0.95
SCARB2-213ENST00000638680 ACTN2P35609 894 aa20.96■□□□□ 0.95
SCARB2-213ENST00000638680 EVCP57679 992 aa20.96■□□□□ 0.95
SCARB2-213ENST00000638680 C6orf229H3BNL8 230 aa20.96■□□□□ 0.95
SCARB2-213ENST00000638680 IL15P40933 162 aaPredicted RBP20.96■□□□□ 0.95
SCARB2-213ENST00000638680 BAG1Q99933 345 aaPredicted RBP20.96■□□□□ 0.95
SCARB2-213ENST00000638680 BRAPQ7Z569 592 aa20.96■□□□□ 0.95
SCARB2-213ENST00000638680 RGS22Q8NE09 1264 aa20.96■□□□□ 0.95
SCARB2-213ENST00000638680 A0A1B0GVL5 298 aa20.96■□□□□ 0.95
SCARB2-213ENST00000638680 RNF113AO15541 343 aaKnown RBP20.96■□□□□ 0.95
SCARB2-213ENST00000638680 STMN4Q9H169 189 aaPredicted RBP20.96■□□□□ 0.95
SCARB2-213ENST00000638680 PPM1EQ8WY54 764 aa20.96■□□□□ 0.95
SCARB2-213ENST00000638680 RIOK3O14730 519 aaKnown RBP20.95■□□□□ 0.94
SCARB2-213ENST00000638680 IQSEC3Q9UPP2 1182 aaPredicted RBP20.95■□□□□ 0.94
SCARB2-213ENST00000638680 KRT2P35908 639 aa20.95■□□□□ 0.94
SCARB2-213ENST00000638680 PPP2R3AQ06190 1150 aa20.95■□□□□ 0.94
SCARB2-213ENST00000638680 DHX32Q7L7V1 743 aaKnown RBP20.95■□□□□ 0.94
SCARB2-213ENST00000638680 PTPRKQ15262 1439 aa20.95■□□□□ 0.94
SCARB2-213ENST00000638680 KRT24Q2M2I5 525 aa20.95■□□□□ 0.94
SCARB2-213ENST00000638680 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.95■□□□□ 0.94
SCARB2-213ENST00000638680 BICD1Q96G01 975 aa20.95■□□□□ 0.94
SCARB2-213ENST00000638680 MXRA7P84157 204 aa20.95■□□□□ 0.94
SCARB2-213ENST00000638680 LMBR1Q8WVP7 490 aa20.95■□□□□ 0.94
SCARB2-213ENST00000638680 PRAG1Q86YV5 1406 aa20.95■□□□□ 0.94
SCARB2-213ENST00000638680 FAM76AQ8TAV0 307 aa20.95■□□□□ 0.94
SCARB2-213ENST00000638680 TMEM110-MUSTN1A8MSY1 372 aa20.94■□□□□ 0.94
SCARB2-213ENST00000638680 KRBA2Q6ZNG9 492 aa20.94■□□□□ 0.94
SCARB2-213ENST00000638680 PRPHP41219 470 aa20.94■□□□□ 0.94
SCARB2-213ENST00000638680 C17orf53Q8N3J3 647 aaPredicted RBP20.94■□□□□ 0.94
SCARB2-213ENST00000638680 NAPAP54920 295 aa20.94■□□□□ 0.94
SCARB2-213ENST00000638680 MYL5Q02045 173 aa20.94■□□□□ 0.94
SCARB2-213ENST00000638680 EIF4A2Q14240 407 aaKnown RBP20.94■□□□□ 0.94
SCARB2-213ENST00000638680 CCDC77Q9BR77 488 aa20.94■□□□□ 0.94
SCARB2-213ENST00000638680 SMIM23A6NLE4 172 aa20.94■□□□□ 0.94
SCARB2-213ENST00000638680 SLC39A6Q13433 755 aa20.94■□□□□ 0.94
SCARB2-213ENST00000638680 RXRAP19793 462 aa20.93■□□□□ 0.94
SCARB2-213ENST00000638680 CCDC152Q4G0S7 254 aa20.93■□□□□ 0.94
SCARB2-213ENST00000638680 HLA-DOAP06340 250 aa20.93■□□□□ 0.94
SCARB2-213ENST00000638680 KRT28Q7Z3Y7 464 aa20.93■□□□□ 0.94
SCARB2-213ENST00000638680 IQCGQ9H095 443 aaKnown RBP20.93■□□□□ 0.94
SCARB2-213ENST00000638680 MSH6P52701 1360 aa20.93■□□□□ 0.94
SCARB2-213ENST00000638680 CC2D2AQ9P2K1 1620 aa20.93■□□□□ 0.94
SCARB2-213ENST00000638680 BICDL2A1A5D9 508 aa20.93■□□□□ 0.94
SCARB2-213ENST00000638680 AKR1B15C9JRZ8 316 aaPredicted RBP20.93■□□□□ 0.94
SCARB2-213ENST00000638680 FAM160A1Q05DH4 1040 aa20.93■□□□□ 0.94
SCARB2-213ENST00000638680 NEK11Q8NG66 645 aa20.93■□□□□ 0.94
SCARB2-213ENST00000638680 MTHFSDQ2M296 383 aaKnown RBP20.93■□□□□ 0.94
SCARB2-213ENST00000638680 MCM7P33993 719 aa20.93■□□□□ 0.94
SCARB2-213ENST00000638680 TERF1P54274 439 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms