RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 BRAPQ7Z569 592 aa19.1■□□□□ 0.65
SCARB2-210ENST00000638567 ODF2Q5BJF6 829 aa19.1■□□□□ 0.65
SCARB2-210ENST00000638567 CACNA2D4Q7Z3S7 1137 aa19.1■□□□□ 0.65
SCARB2-210ENST00000638567 KRT23Q9C075 422 aa19.1■□□□□ 0.65
SCARB2-210ENST00000638567 SEC63Q9UGP8 760 aaKnown RBP19.1■□□□□ 0.65
SCARB2-210ENST00000638567 ZNF500O60304 480 aaPredicted RBP19.09■□□□□ 0.65
SCARB2-210ENST00000638567 ZNF75DP51815 510 aa19.09■□□□□ 0.65
SCARB2-210ENST00000638567 SLC4A8Q2Y0W8 1093 aa19.09■□□□□ 0.65
SCARB2-210ENST00000638567 MAP9Q49MG5 647 aa19.09■□□□□ 0.65
SCARB2-210ENST00000638567 RASEFQ8IZ41 740 aa19.09■□□□□ 0.65
SCARB2-210ENST00000638567 ZNF444Q8N0Y2 327 aaPredicted RBP19.09■□□□□ 0.65
SCARB2-210ENST00000638567 HELBQ8NG08 1087 aaPredicted RBP19.09■□□□□ 0.65
SCARB2-210ENST00000638567 SLC4A4Q9Y6R1 1079 aa19.09■□□□□ 0.65
SCARB2-210ENST00000638567 TSPY2A6NKD2 308 aa19.09■□□□□ 0.65
SCARB2-210ENST00000638567 DCAF5Q96JK2 942 aa19.09■□□□□ 0.65
SCARB2-210ENST00000638567 OSBPL3Q9H4L5 887 aa19.09■□□□□ 0.65
SCARB2-210ENST00000638567 RNF216Q9NWF9 866 aaPredicted RBP19.09■□□□□ 0.65
SCARB2-210ENST00000638567 MTMR6Q9Y217 621 aa19.09■□□□□ 0.65
SCARB2-210ENST00000638567 A0A1B0GUL7 405 aa19.09■□□□□ 0.65
SCARB2-210ENST00000638567 MTIF2P46199 727 aaKnown RBP19.09■□□□□ 0.65
SCARB2-210ENST00000638567 ENOX2Q16206 610 aaKnown RBP19.09■□□□□ 0.65
SCARB2-210ENST00000638567 ARHGEF10O15013 1369 aa19.09■□□□□ 0.65
SCARB2-210ENST00000638567 EAF2Q96CJ1 260 aaPredicted RBP19.09■□□□□ 0.65
SCARB2-210ENST00000638567 PHF23Q9BUL5 403 aaPredicted RBP19.09■□□□□ 0.65
SCARB2-210ENST00000638567 SSH2Q76I76 1423 aa19.09■□□□□ 0.65
SCARB2-210ENST00000638567 LIG1P18858 919 aa19.08■□□□□ 0.65
SCARB2-210ENST00000638567 SYCP1Q15431 976 aa19.08■□□□□ 0.65
SCARB2-210ENST00000638567 MEX3CQ5U5Q3 659 aaKnown RBP19.08■□□□□ 0.65
SCARB2-210ENST00000638567 ATL3Q6DD88 541 aa19.08■□□□□ 0.64
SCARB2-210ENST00000638567 TAF4BQ92750 862 aa19.08■□□□□ 0.64
SCARB2-210ENST00000638567 ARFGAP3Q9NP61 516 aa19.08■□□□□ 0.64
SCARB2-210ENST00000638567 HELLSQ9NRZ9 838 aa19.08■□□□□ 0.64
SCARB2-210ENST00000638567 EXOC5O00471 708 aa19.08■□□□□ 0.64
SCARB2-210ENST00000638567 CYP7A1P22680 504 aa19.08■□□□□ 0.64
SCARB2-210ENST00000638567 CADPS2Q86UW7 1296 aa19.08■□□□□ 0.64
SCARB2-210ENST00000638567 CNNM2Q9H8M5 875 aa19.08■□□□□ 0.64
SCARB2-210ENST00000638567 KAT6BQ8WYB5 2073 aa19.08■□□□□ 0.64
SCARB2-210ENST00000638567 GCKRQ14397 625 aa19.07■□□□□ 0.64
SCARB2-210ENST00000638567 DHX58Q96C10 678 aa19.07■□□□□ 0.64
SCARB2-210ENST00000638567 IDEP14735 1019 aa19.07■□□□□ 0.64
SCARB2-210ENST00000638567 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.07■□□□□ 0.64
SCARB2-210ENST00000638567 KBTBD3Q8NAB2 608 aa19.07■□□□□ 0.64
SCARB2-210ENST00000638567 ESR2Q92731 530 aa19.07■□□□□ 0.64
SCARB2-210ENST00000638567 ZNF287Q9HBT7 754 aa19.07■□□□□ 0.64
SCARB2-210ENST00000638567 TRPM1Q7Z4N2 1603 aa19.07■□□□□ 0.64
SCARB2-210ENST00000638567 EYA2O00167 538 aa19.07■□□□□ 0.64
SCARB2-210ENST00000638567 LMAN1P49257 510 aa19.07■□□□□ 0.64
SCARB2-210ENST00000638567 RRAGBQ5VZM2 374 aa19.07■□□□□ 0.64
SCARB2-210ENST00000638567 TMTC2Q8N394 836 aa19.07■□□□□ 0.64
SCARB2-210ENST00000638567 A0A0D9SFI3 127 aa19.07■□□□□ 0.64
SCARB2-210ENST00000638567 ERLIN2O94905 339 aa19.07■□□□□ 0.64
SCARB2-210ENST00000638567 CDC5LQ99459 802 aaKnown RBP19.07■□□□□ 0.64
SCARB2-210ENST00000638567 STAP2Q9UGK3 403 aa19.07■□□□□ 0.64
SCARB2-210ENST00000638567 STX17P56962 302 aa19.06■□□□□ 0.64
SCARB2-210ENST00000638567 TDRD12Q587J7 1177 aaKnown RBP19.06■□□□□ 0.64
SCARB2-210ENST00000638567 LLPHQ9BRT6 129 aaKnown RBP19.06■□□□□ 0.64
SCARB2-210ENST00000638567 TPCN1Q9ULQ1 816 aa19.06■□□□□ 0.64
SCARB2-210ENST00000638567 TCP11L1Q9NUJ3 509 aa19.06■□□□□ 0.64
SCARB2-210ENST00000638567 TRIM75PA6NK02 468 aa19.06■□□□□ 0.64
SCARB2-210ENST00000638567 ZSCAN29Q8IWY8 852 aaPredicted RBP19.06■□□□□ 0.64
SCARB2-210ENST00000638567 ZNF594Q96JF6 807 aaPredicted RBP19.06■□□□□ 0.64
SCARB2-210ENST00000638567 SEPT11Q9NVA2 429 aaKnown RBP19.06■□□□□ 0.64
SCARB2-210ENST00000638567 RGS12O14924 1447 aa19.05■□□□□ 0.64
SCARB2-210ENST00000638567 USO1O60763 962 aaKnown RBP19.05■□□□□ 0.64
SCARB2-210ENST00000638567 KIF5BP33176 963 aa19.05■□□□□ 0.64
SCARB2-210ENST00000638567 RDXP35241 583 aaKnown RBP19.05■□□□□ 0.64
SCARB2-210ENST00000638567 MCM6Q14566 821 aa19.05■□□□□ 0.64
SCARB2-210ENST00000638567 UTP14AQ9BVJ6 771 aaKnown RBP19.05■□□□□ 0.64
SCARB2-210ENST00000638567 ANKIB1Q9P2G1 1089 aa19.05■□□□□ 0.64
SCARB2-210ENST00000638567 MYL5Q02045 173 aa19.05■□□□□ 0.64
SCARB2-210ENST00000638567 AATKQ6ZMQ8 1374 aa19.05■□□□□ 0.64
SCARB2-210ENST00000638567 PREX2Q70Z35 1606 aa19.05■□□□□ 0.64
SCARB2-210ENST00000638567 PAFAH1B1P43034 410 aa19.05■□□□□ 0.64
SCARB2-210ENST00000638567 BEND3Q5T5X7 828 aa19.05■□□□□ 0.64
SCARB2-210ENST00000638567 TTC6Q86TZ1 520 aa19.05■□□□□ 0.64
SCARB2-210ENST00000638567 TRIM47Q96LD4 638 aa19.05■□□□□ 0.64
SCARB2-210ENST00000638567 POTEB2H3BUK9 544 aa19.05■□□□□ 0.64
SCARB2-210ENST00000638567 KARSQ15046 597 aaKnown RBP19.04■□□□□ 0.64
SCARB2-210ENST00000638567 ADCK5Q3MIX3 580 aa19.04■□□□□ 0.64
SCARB2-210ENST00000638567 FAM89AQ96GI7 184 aa19.04■□□□□ 0.64
SCARB2-210ENST00000638567 ZNF496Q96IT1 587 aaPredicted RBP19.04■□□□□ 0.64
SCARB2-210ENST00000638567 U2AF2P26368 475 aaKnown RBP eCLIP19.04■□□□□ 0.64
SCARB2-210ENST00000638567 IFIT1BQ5T764 474 aaKnown RBP19.04■□□□□ 0.64
SCARB2-210ENST00000638567 ZSWIM6Q9HCJ5 1215 aa19.04■□□□□ 0.64
SCARB2-210ENST00000638567 ORAI2Q96SN7 254 aa19.04■□□□□ 0.64
SCARB2-210ENST00000638567 VAT1LQ9HCJ6 419 aa19.04■□□□□ 0.64
SCARB2-210ENST00000638567 ZBTB9Q96C00 473 aa19.03■□□□□ 0.64
SCARB2-210ENST00000638567 SRRTQ9BXP5 876 aaKnown RBP19.03■□□□□ 0.64
SCARB2-210ENST00000638567 KAT14Q9H8E8 782 aa19.03■□□□□ 0.64
SCARB2-210ENST00000638567 STX8Q9UNK0 236 aa19.03■□□□□ 0.64
SCARB2-210ENST00000638567 MCM3P25205 808 aa19.03■□□□□ 0.64
SCARB2-210ENST00000638567 RBM5P52756 815 aaKnown RBP eCLIP19.03■□□□□ 0.64
SCARB2-210ENST00000638567 PDE4BQ07343 736 aa19.03■□□□□ 0.64
SCARB2-210ENST00000638567 CUL4AQ13619 759 aa19.03■□□□□ 0.64
SCARB2-210ENST00000638567 PLBD2Q8NHP8 589 aa19.03■□□□□ 0.64
SCARB2-210ENST00000638567 FEZ1Q99689 392 aa19.03■□□□□ 0.64
SCARB2-210ENST00000638567 FAM135BQ49AJ0 1406 aa19.03■□□□□ 0.64
SCARB2-210ENST00000638567 GIGYF1O75420 1035 aaPredicted RBP19.03■□□□□ 0.64
SCARB2-210ENST00000638567 TUBB4AP04350 444 aa19.03■□□□□ 0.64
SCARB2-210ENST00000638567 CCDC175P0C221 793 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms